RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 SLIT1O75093 1534 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 MYPNQ86TC9 1320 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 KLF11O14901 512 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 PTPN7P35236 360 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 PEX13Q92968 403 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 RPSAP08865 295 aaKnown RBP5.19□□□□□ -1.58
PCDH9-201ENST00000377861 FMO5P49326 533 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 SFSWAPQ12872 951 aaKnown RBP5.19□□□□□ -1.58
PCDH9-201ENST00000377861 NFX1Q12986 1120 aaKnown RBP5.19□□□□□ -1.58
PCDH9-201ENST00000377861 KRT80Q6KB66 452 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 ZIM3Q96PE6 472 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 AP1G2O75843 785 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 PRDX6P30041 224 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 PHKA2P46019 1235 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 ZSWIM1Q9BR11 485 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 NCKIPSDQ9NZQ3 722 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 C10orf71Q711Q0 1435 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 TMCC1O94876 653 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 PTK6Q13882 451 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 SLC13A5Q86YT5 568 aaPredicted RBP5.19□□□□□ -1.58
PCDH9-201ENST00000377861 CDKL3Q8IVW4 592 aaPredicted RBP5.19□□□□□ -1.58
PCDH9-201ENST00000377861 ZFAND2BQ8WV99 257 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 TRIM4Q9C037 500 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 DSEQ9UL01 958 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 DERAQ9Y315 318 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 BACH1O14867 736 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 MMP13P45452 471 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 CDC16Q13042 620 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 LRRC43Q8N309 656 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 IQSEC2Q5JU85 1478 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 ZNF839A8K0R7 811 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 PON1P27169 355 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 CYTH1Q15438 398 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 NDEL1Q9GZM8 345 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 UBA5Q9GZZ9 404 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 TMEM134Q9H6X4 195 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 PEX5P50542 639 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 PAPOLAP51003 745 aaKnown RBP5.19□□□□□ -1.58
PCDH9-201ENST00000377861 E2F4Q16254 413 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 UNC93AQ86WB7 457 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 TLR10Q9BXR5 811 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 TESPA1A2RU30 521 aaPredicted RBP5.19□□□□□ -1.58
PCDH9-201ENST00000377861 SORBS3O60504 671 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 CYP1A2P05177 515 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 GSDMBQ8TAX9 411 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 IDI2Q9BXS1 227 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 C3orf70A6NLC5 250 aaPredicted RBP5.19□□□□□ -1.58
PCDH9-201ENST00000377861 GPSM2P81274 684 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 RBP5P82980 135 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 KIF22Q14807 665 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 ZCWPW2Q504Y3 356 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 PEX1O43933 1283 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 SNX3O60493 162 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 KCNMA1Q12791 1236 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 PPP1R15BQ5SWA1 713 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 MEX3CQ5U5Q3 659 aaKnown RBP5.19□□□□□ -1.58
PCDH9-201ENST00000377861 KYQ8NBH2 561 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 ZNF473Q8WTR7 871 aaKnown RBP5.19□□□□□ -1.58
PCDH9-201ENST00000377861 PSPC1Q8WXF1 523 aaKnown RBP5.19□□□□□ -1.58
PCDH9-201ENST00000377861 PCDHA6Q9UN73 950 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 PCDHA8Q9Y5H6 950 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 NR1H2P55055 460 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 ZNF701M0R085 212 aaPredicted RBP5.19□□□□□ -1.58
PCDH9-201ENST00000377861 APOA1P02647 267 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 VSNL1P62760 191 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 FUKQ8N0W3 1084 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 SLC10A4Q96EP9 437 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 SYBUQ9NX95 663 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 BTG4Q9NY30 223 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 BTG3Q14201 252 aaPredicted RBP5.19□□□□□ -1.58
PCDH9-201ENST00000377861 FAM83EQ2M2I3 478 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 MYCBPAPQ8TBZ2 947 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 SUN2Q9UH99 717 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 LIG3P49916 1009 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 HSD17B14Q9BPX1 270 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 ANKRD6Q9Y2G4 727 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 PLA2G4AP47712 749 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 HIC1Q14526 733 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 UGT3A1Q6NUS8 523 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 HOPXQ9BPY8 73 aaPredicted RBP5.19□□□□□ -1.58
PCDH9-201ENST00000377861 DNAJC24Q6P3W2 148 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 SKAP1Q86WV1 359 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 CD320Q9NPF0 282 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 PRDM4Q9UKN5 801 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 ITGA10O75578 1167 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 CAMK1DQ8IU85 385 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 BCAR1P56945 870 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 FAM173BQ6P4H8 233 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 UNC5BQ8IZJ1 945 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.19□□□□□ -1.58
PCDH9-201ENST00000377861 TNPO3Q9Y5L0 923 aaKnown RBP5.19□□□□□ -1.58
PCDH9-201ENST00000377861 TLR3O15455 904 aaKnown RBP5.19□□□□□ -1.58
PCDH9-201ENST00000377861 GK3PQ14409 553 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 INPP5AQ14642 412 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 NATD1Q8N6N6 113 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 STAP1Q9ULZ2 295 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 IVNS1ABPQ9Y6Y0 642 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 MROH7-TTC4A0A0A0MT08 1334 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 ZNF197O14709 1029 aa5.19□□□□□ -1.58
PCDH9-201ENST00000377861 TTC39BQ5VTQ0 682 aaPredicted RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms