RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 IGKV6D-41A0A0C4DH26 115 aa15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 MAPK13O15264 365 aa15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 MOXD1Q6UVY6 613 aa15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 TRMT10CQ7L0Y3 403 aaKnown RBP15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 NCAPG2Q86XI2 1143 aa15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 CYP4X1Q8N118 509 aa15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 DAW1Q8N136 415 aa15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 CCDC110Q8TBZ0 833 aa15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 TMEM8AQ9HCN3 771 aa15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 ZFP69BQ9UJL9 534 aa15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 TMEM59LQ9UK28 342 aa15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 DNPEPQ9ULA0 475 aa15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 FRMPD4Q14CM0 1322 aa15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 CHD4Q14839 1912 aa15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 FAM47DPA6NHR8 397 aa15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 SNX3O60493 162 aa15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 RASSF2P50749 326 aa15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 RPL7AP62424 266 aaKnown RBP15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 LRRC71Q8N4P6 559 aa15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 TRIM6Q9C030 488 aaPredicted RBP15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 TRPC5Q9UL62 973 aaPredicted RBP15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 RNF8O76064 485 aa15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 NR3C2P08235 984 aa15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 KRT16P08779 473 aa15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 HOXA7P31268 230 aaPredicted RBP15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 KRT81Q14533 505 aa15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 PCNX4Q63HM2 1172 aa15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 PKD1L3Q7Z443 1732 aa15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 BCL9LQ86UU0 1499 aa15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 LMNTD2Q8IXW0 634 aa15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 RASGEF1CQ8N431 466 aa15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 AGR3Q8TD06 166 aa15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 RAB3IPQ96QF0 476 aaPredicted RBP15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 TBC1D22BQ9NU19 505 aa15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 GRHL1Q9NZI5 618 aa15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 COL20A1Q9P218 1284 aa15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 AGAP1Q9UPQ3 857 aa15.22■□□□□ 0.03
TNFRSF1B-201ENST00000376259 MYH14Q7Z406 1995 aaKnown RBP15.21■□□□□ 0.03
TNFRSF1B-201ENST00000376259 LAMB4A4D0S4 1761 aa15.21■□□□□ 0.03
TNFRSF1B-201ENST00000376259 IGLV3-22A0A075B6J6 115 aa15.21■□□□□ 0.03
TNFRSF1B-201ENST00000376259 FNTAP49354 379 aa15.21■□□□□ 0.03
TNFRSF1B-201ENST00000376259 PPP2R5CQ13362 524 aa15.21■□□□□ 0.03
TNFRSF1B-201ENST00000376259 C3orf62Q6ZUJ4 267 aa15.21■□□□□ 0.03
TNFRSF1B-201ENST00000376259 RNF19AQ9NV58 838 aa15.21■□□□□ 0.03
TNFRSF1B-201ENST00000376259 SEPT10Q9P0V9 454 aa15.21■□□□□ 0.03
TNFRSF1B-201ENST00000376259 FBXO40Q9UH90 709 aa15.21■□□□□ 0.03
TNFRSF1B-201ENST00000376259 FEM1BQ9UK73 627 aa15.21■□□□□ 0.03
TNFRSF1B-201ENST00000376259 ROBO1Q9Y6N7 1651 aa15.21■□□□□ 0.03
TNFRSF1B-201ENST00000376259 F8VP50 259 aa15.21■□□□□ 0.03
TNFRSF1B-201ENST00000376259 TJP3O95049 919 aa15.21■□□□□ 0.03
TNFRSF1B-201ENST00000376259 CPP00450 1065 aa15.21■□□□□ 0.03
TNFRSF1B-201ENST00000376259 TAS2R40P59535 323 aa15.21■□□□□ 0.03
TNFRSF1B-201ENST00000376259 PRKCEQ02156 737 aa15.21■□□□□ 0.03
TNFRSF1B-201ENST00000376259 FASTKD3Q14CZ7 662 aaKnown RBP15.21■□□□□ 0.03
TNFRSF1B-201ENST00000376259 SULF1Q8IWU6 871 aa15.21■□□□□ 0.03
TNFRSF1B-201ENST00000376259 PPFIBP2Q8ND30 876 aa15.21■□□□□ 0.03
TNFRSF1B-201ENST00000376259 P3H4Q92791 437 aa15.21■□□□□ 0.03
TNFRSF1B-201ENST00000376259 AKT1S1Q96B36 256 aa15.21■□□□□ 0.03
TNFRSF1B-201ENST00000376259 OSBPL1AQ9BXW6 950 aa15.21■□□□□ 0.03
TNFRSF1B-201ENST00000376259 PHTF1Q9UMS5 762 aa15.21■□□□□ 0.03
TNFRSF1B-201ENST00000376259 CST8O60676 142 aa15.21■□□□□ 0.02
TNFRSF1B-201ENST00000376259 CFHP08603 1231 aa15.21■□□□□ 0.02
TNFRSF1B-201ENST00000376259 NLRP11P59045 1033 aaKnown RBP15.21■□□□□ 0.02
TNFRSF1B-201ENST00000376259 ZRSR2Q15696 482 aaKnown RBP15.21■□□□□ 0.02
TNFRSF1B-201ENST00000376259 CRY2Q49AN0 593 aa15.21■□□□□ 0.02
TNFRSF1B-201ENST00000376259 MFSD7Q6UXD7 560 aa15.21■□□□□ 0.02
TNFRSF1B-201ENST00000376259 PLEKHO2Q8TD55 490 aa15.21■□□□□ 0.02
TNFRSF1B-201ENST00000376259 CCT6BQ92526 530 aa15.21■□□□□ 0.02
TNFRSF1B-201ENST00000376259 RMDN2Q96LZ7 410 aa15.21■□□□□ 0.02
TNFRSF1B-201ENST00000376259 APOL6Q9BWW8 343 aa15.21■□□□□ 0.02
TNFRSF1B-201ENST00000376259 PPARGC1AQ9UBK2 798 aaKnown RBP15.21■□□□□ 0.02
TNFRSF1B-201ENST00000376259 STXBP5LQ9Y2K9 1186 aa15.21■□□□□ 0.02
TNFRSF1B-201ENST00000376259 TMX2Q9Y320 296 aa15.21■□□□□ 0.02
TNFRSF1B-201ENST00000376259 PCDHB2Q9Y5E7 798 aa15.21■□□□□ 0.02
TNFRSF1B-201ENST00000376259 PCDHA3Q9Y5H8 950 aa15.21■□□□□ 0.02
TNFRSF1B-201ENST00000376259 MYH3P11055 1940 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 ANXA13P27216 316 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 KDSRQ06136 332 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 NFX1Q12986 1120 aaKnown RBP15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 C6orf163Q5TEZ5 329 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 OR6B2Q6IFH4 312 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 SAMD7Q7Z3H4 446 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 PDIK1LQ8N165 341 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 PGM2Q96G03 612 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 RPS6KC1Q96S38 1066 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 RIT2Q99578 217 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 TTC1Q99614 292 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 TXLNGQ9NUQ3 528 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 SLC9A2Q9UBY0 812 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 GYG2O15488 501 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 ESRRAP11474 423 aaPredicted RBP15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 PECAM1P16284 738 aaPredicted RBP15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 PSMC1P62191 440 aaKnown RBP15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 NCOA4Q13772 614 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 TSNAXIP1Q2TAA8 658 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 SLFN11Q7Z7L1 901 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 SESTD1Q86VW0 696 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 ZDHHC14Q8IZN3 488 aa15.2■□□□□ 0.02
TNFRSF1B-201ENST00000376259 MKL1Q969V6 931 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms