RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 UBN1Q9NPG3 1134 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 CYP26B1Q9NR63 512 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 OLFML3Q9NRN5 406 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 KIF17Q9P2E2 1029 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 SEPT3Q9UH03 358 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 PCDHA4Q9UN74 947 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 PCDHB6Q9Y5E3 794 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 PTPRAP18433 802 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 EN2P19622 333 aaPredicted RBP6.63□□□□□ -1.35
PTPN3-202ENST00000374541 IL10P22301 178 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 PMLP29590 882 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 ADD2P35612 726 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 SKOR1P84550 965 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 ANO4Q32M45 955 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 BBS9Q3SYG4 887 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 PARP9Q8IXQ6 854 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 NXF1Q9UBU9 619 aaKnown RBP6.63□□□□□ -1.35
PTPN3-202ENST00000374541 TNNQ9UQP3 1299 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 FAM187AA6NFU0 413 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 ZBTB5O15062 677 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 SEPT4O43236 478 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 NR3C2P08235 984 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 PSEN2P49810 448 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 NDUFA8P51970 172 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 INPP5AQ14642 412 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 SH3GL2Q99962 352 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 NHEJ1Q9H9Q4 299 aaPredicted RBP6.63□□□□□ -1.35
PTPN3-202ENST00000374541 ABCF3Q9NUQ8 709 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 PKD2L2Q9NZM6 624 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 PCDHA6Q9UN73 950 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 NCKAP1Q9Y2A7 1128 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 PCDHA8Q9Y5H6 950 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 PCDHA5Q9Y5H7 936 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 PCDHA13Q9Y5I0 950 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 SPDYE5A6NIY4 337 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 MYO1DO94832 1006 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 CXCL14O95715 111 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 NDUFB10O96000 172 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 CKMP06732 381 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 CKBP12277 381 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 SFNP31947 248 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 COPS2P61201 443 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 ABCE1P61221 599 aaKnown RBP6.63□□□□□ -1.35
PTPN3-202ENST00000374541 C2orf54Q08AI8 447 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 KRR1Q13601 381 aaKnown RBP6.63□□□□□ -1.35
PTPN3-202ENST00000374541 EFTUD2Q15029 972 aaKnown RBP eCLIP6.63□□□□□ -1.35
PTPN3-202ENST00000374541 DCP1BQ8IZD4 617 aaKnown RBP6.63□□□□□ -1.35
PTPN3-202ENST00000374541 DCLK2Q8N568 766 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 CCDC127Q96BQ5 260 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 DYDC2Q96IM9 177 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 CNBD2Q96M20 576 aa6.63□□□□□ -1.35
PTPN3-202ENST00000374541 PCNTO95613 3336 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 FAM95CA0A1B0GW59 222 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 GOLGA8IPA6NC78 632 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 HBP1O60381 514 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 SNX2O60749 519 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 ZNF286BP0CG31 522 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 MXI1P50539 228 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 CREMQ03060 361 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 TRIM28Q13263 835 aaKnown RBP6.62□□□□□ -1.35
PTPN3-202ENST00000374541 SLFN12LQ6IEE8 588 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 MAFAQ8NHW3 353 aaPredicted RBP6.62□□□□□ -1.35
PTPN3-202ENST00000374541 SSH3Q8TE77 659 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 PBXIP1Q96AQ6 731 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 WWP1Q9H0M0 922 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 ABCB6Q9NP58 842 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 PIH1D3Q9NQM4 214 aaKnown RBP6.62□□□□□ -1.35
PTPN3-202ENST00000374541 PLAAQ9Y263 795 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 RIC1Q4ADV7 1423 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 XRN1Q8IZH2 1706 aaKnown RBP6.62□□□□□ -1.35
PTPN3-202ENST00000374541 GMNCA6NCL1 334 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 AP3B1O00203 1094 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 ONECUT3O60422 494 aaPredicted RBP6.62□□□□□ -1.35
PTPN3-202ENST00000374541 CAND2O75155 1236 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 ADH1AP07327 375 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 HNRNPCP07910 306 aaKnown RBP eCLIP6.62□□□□□ -1.35
PTPN3-202ENST00000374541 SMARCA1P28370 1054 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 S100A5P33763 92 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 ARFIP2P53365 341 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 PPP2R2AP63151 447 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 ZBTB41Q5SVQ8 909 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 ARL6IP4Q66PJ3 421 aaKnown RBP6.62□□□□□ -1.35
PTPN3-202ENST00000374541 GJA10Q969M2 543 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 EPAS1Q99814 870 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 YIPF3Q9GZM5 350 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 CRYBG1Q9Y4K1 1723 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 SLC4A1P02730 911 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 DNAL1Q4LDG9 190 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 TRIM69Q86WT6 500 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 ELAC2Q9BQ52 826 aaKnown RBP6.62□□□□□ -1.35
PTPN3-202ENST00000374541 MSTO1Q9BUK6 570 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 CYP4F11Q9HBI6 524 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 SRPRBQ9Y5M8 271 aaKnown RBP6.62□□□□□ -1.35
PTPN3-202ENST00000374541 ZNF142P52746 1687 aaPredicted RBP6.62□□□□□ -1.35
PTPN3-202ENST00000374541 ARHGAP23Q9P227 1491 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 A0A0G2JND7 137 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 PNMA6EA0A0J9YXQ4 647 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 MOXD2PA6NHM9 499 aa6.62□□□□□ -1.35
PTPN3-202ENST00000374541 LDHAP00338 332 aaKnown RBP6.62□□□□□ -1.35
PTPN3-202ENST00000374541 GSNP06396 782 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms