RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 LAMB3Q13751 1172 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 SLC1A5Q15758 541 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 LRRC8CQ8TDW0 803 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 SPIRE2Q8WWL2 714 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 DCTN4Q9UJW0 460 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 USTQ9Y2C2 406 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 NUMBLQ9Y6R0 609 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 A0A1W2PPM1 405 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 LIN7AO14910 233 aaPredicted RBP14.53□□□□□ -0.08
USP49-201ENST00000373006 GRIN3BO60391 1043 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 CD58P19256 250 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 SPARCL1Q14515 664 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 RFWD3Q6PCD5 774 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 ANKS1BQ7Z6G8 1248 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 MTDHQ86UE4 582 aaKnown RBP14.53□□□□□ -0.08
USP49-201ENST00000373006 C12orf65Q9H3J6 166 aaKnown RBP14.53□□□□□ -0.08
USP49-201ENST00000373006 NPHS2Q9NP85 383 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 GPRC5CQ9NQ84 441 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 LARSQ9P2J5 1176 aaKnown RBP14.53□□□□□ -0.08
USP49-201ENST00000373006 PRR12Q9ULL5 1215 aa14.53□□□□□ -0.08
USP49-201ENST00000373006 MROH7Q68CQ1 1323 aa14.52□□□□□ -0.08
USP49-201ENST00000373006 SLC16A4O15374 487 aa14.52□□□□□ -0.08
USP49-201ENST00000373006 ETS1P14921 441 aa14.52□□□□□ -0.08
USP49-201ENST00000373006 HSPA1LP34931 641 aa14.52□□□□□ -0.08
USP49-201ENST00000373006 CAV1Q03135 178 aa14.52□□□□□ -0.08
USP49-201ENST00000373006 OVGP1Q12889 678 aa14.52□□□□□ -0.08
USP49-201ENST00000373006 PCNX4Q63HM2 1172 aa14.52□□□□□ -0.08
USP49-201ENST00000373006 KAZNQ674X7 775 aa14.52□□□□□ -0.08
USP49-201ENST00000373006 APBB1IPQ7Z5R6 666 aaPredicted RBP14.52□□□□□ -0.08
USP49-201ENST00000373006 TAS1R2Q8TE23 839 aa14.52□□□□□ -0.08
USP49-201ENST00000373006 TEKT1Q969V4 418 aa14.52□□□□□ -0.08
USP49-201ENST00000373006 UBN1Q9NPG3 1134 aa14.52□□□□□ -0.08
USP49-201ENST00000373006 EURLQ9NYK6 297 aa14.52□□□□□ -0.08
USP49-201ENST00000373006 C10orf71Q711Q0 1435 aa14.52□□□□□ -0.09
USP49-201ENST00000373006 ATP5HO75947 161 aa14.52□□□□□ -0.09
USP49-201ENST00000373006 PAPOLAP51003 745 aaKnown RBP14.52□□□□□ -0.09
USP49-201ENST00000373006 KHDC1Q4VXA5 237 aaKnown RBP14.52□□□□□ -0.09
USP49-201ENST00000373006 ZFYVE27Q5T4F4 411 aa14.52□□□□□ -0.09
USP49-201ENST00000373006 LMNTD2Q8IXW0 634 aa14.52□□□□□ -0.09
USP49-201ENST00000373006 HELQQ8TDG4 1101 aa14.52□□□□□ -0.09
USP49-201ENST00000373006 DENND1AQ8TEH3 1009 aa14.52□□□□□ -0.09
USP49-201ENST00000373006 DDX1Q92499 740 aaKnown RBP14.52□□□□□ -0.09
USP49-201ENST00000373006 DDX27Q96GQ7 796 aaKnown RBP14.52□□□□□ -0.09
USP49-201ENST00000373006 ACCSQ96QU6 501 aa14.52□□□□□ -0.09
USP49-201ENST00000373006 FHDC1Q9C0D6 1143 aaPredicted RBP14.52□□□□□ -0.09
USP49-201ENST00000373006 VPS37BQ9H9H4 285 aa14.52□□□□□ -0.09
USP49-201ENST00000373006 TMEM165Q9HC07 324 aa14.52□□□□□ -0.09
USP49-201ENST00000373006 COL16A1Q07092 1604 aaPredicted RBP14.52□□□□□ -0.09
USP49-201ENST00000373006 EDF1O60869 148 aaKnown RBP14.51□□□□□ -0.09
USP49-201ENST00000373006 BBOX1O75936 387 aa14.51□□□□□ -0.09
USP49-201ENST00000373006 ATP6V1C1P21283 382 aa14.51□□□□□ -0.09
USP49-201ENST00000373006 RAB27AP51159 221 aa14.51□□□□□ -0.09
USP49-201ENST00000373006 MTM1Q13496 603 aa14.51□□□□□ -0.09
USP49-201ENST00000373006 MUM1Q2TAK8 710 aa14.51□□□□□ -0.09
USP49-201ENST00000373006 CEP55Q53EZ4 464 aa14.51□□□□□ -0.09
USP49-201ENST00000373006 TMEM154Q6P9G4 183 aa14.51□□□□□ -0.09
USP49-201ENST00000373006 TEX9Q8N6V9 391 aa14.51□□□□□ -0.09
USP49-201ENST00000373006 CCDC89Q8N998 374 aa14.51□□□□□ -0.09
USP49-201ENST00000373006 DNAJC9Q8WXX5 260 aa14.51□□□□□ -0.09
USP49-201ENST00000373006 SMC6Q96SB8 1091 aa14.51□□□□□ -0.09
USP49-201ENST00000373006 TMEM206Q9H813 350 aa14.51□□□□□ -0.09
USP49-201ENST00000373006 METTL5Q9NRN9 209 aaKnown RBP14.51□□□□□ -0.09
USP49-201ENST00000373006 NEU2Q9Y3R4 380 aa14.51□□□□□ -0.09
USP49-201ENST00000373006 LRRD1A4D1F6 860 aa14.51□□□□□ -0.09
USP49-201ENST00000373006 PI4K2BG5E9Z4 385 aa14.51□□□□□ -0.09
USP49-201ENST00000373006 P4HA2O15460 535 aa14.51□□□□□ -0.09
USP49-201ENST00000373006 DCTN3O75935 186 aa14.51□□□□□ -0.09
USP49-201ENST00000373006 GYS1P13807 737 aa14.51□□□□□ -0.09
USP49-201ENST00000373006 ATP13A4Q4VNC1 1196 aa14.51□□□□□ -0.09
USP49-201ENST00000373006 PLEKHG4Q58EX7 1191 aa14.51□□□□□ -0.09
USP49-201ENST00000373006 SYDE1Q6ZW31 735 aaPredicted RBP14.51□□□□□ -0.09
USP49-201ENST00000373006 SH3BP5LQ7L8J4 393 aa14.51□□□□□ -0.09
USP49-201ENST00000373006 OTOAQ7RTW8 1153 aa14.51□□□□□ -0.09
USP49-201ENST00000373006 HAUS6Q7Z4H7 955 aa14.51□□□□□ -0.09
USP49-201ENST00000373006 ASAP3Q8TDY4 903 aa14.51□□□□□ -0.09
USP49-201ENST00000373006 ALG13Q9NP73 1137 aaKnown RBP14.51□□□□□ -0.09
USP49-201ENST00000373006 ZFP69BQ9UJL9 534 aa14.51□□□□□ -0.09
USP49-201ENST00000373006 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.51□□□□□ -0.09
USP49-201ENST00000373006 ACTL7BQ9Y614 415 aa14.51□□□□□ -0.09
USP49-201ENST00000373006 IPO5O00410 1097 aaKnown RBP14.5□□□□□ -0.09
USP49-201ENST00000373006 BANF1O75531 89 aa14.5□□□□□ -0.09
USP49-201ENST00000373006 GH2P01242 217 aa14.5□□□□□ -0.09
USP49-201ENST00000373006 FDX1P10109 184 aa14.5□□□□□ -0.09
USP49-201ENST00000373006 KRT10P13645 584 aa14.5□□□□□ -0.09
USP49-201ENST00000373006 PEX3P56589 373 aa14.5□□□□□ -0.09
USP49-201ENST00000373006 TAS2R40P59535 323 aa14.5□□□□□ -0.09
USP49-201ENST00000373006 ABCB5Q2M3G0 1257 aa14.5□□□□□ -0.09
USP49-201ENST00000373006 HHATQ5VTY9 493 aa14.5□□□□□ -0.09
USP49-201ENST00000373006 CCDC125Q86Z20 511 aa14.5□□□□□ -0.09
USP49-201ENST00000373006 SEPT12Q8IYM1 358 aa14.5□□□□□ -0.09
USP49-201ENST00000373006 B4GALNT2Q8NHY0 566 aa14.5□□□□□ -0.09
USP49-201ENST00000373006 UCMAQ8WVF2 138 aa14.5□□□□□ -0.09
USP49-201ENST00000373006 C10orf82Q8WW14 230 aa14.5□□□□□ -0.09
USP49-201ENST00000373006 INPP5DQ92835 1189 aa14.5□□□□□ -0.09
USP49-201ENST00000373006 KIFC3Q9BVG8 833 aa14.5□□□□□ -0.09
USP49-201ENST00000373006 GOLGA8SH3BPF8 625 aa14.5□□□□□ -0.09
USP49-201ENST00000373006 GOLGA8MH3BSY2 632 aa14.5□□□□□ -0.09
USP49-201ENST00000373006 PLS3P13797 630 aa14.5□□□□□ -0.09
USP49-201ENST00000373006 MAN1A1P33908 653 aa14.5□□□□□ -0.09
USP49-201ENST00000373006 SNRNP35Q16560 246 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms