RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 MROH2AA6NES4 1674 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 SYCE1LA8MT33 242 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 EXTL3O43909 919 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 NFIAQ12857 509 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 DCP1BQ8IZD4 617 aaKnown RBP10.31□□□□□ -0.76
COL4A6-202ENST00000372216 SLC30A5Q8TAD4 765 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 MAN1C1Q9NR34 630 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 PRMT7Q9NVM4 692 aaPredicted RBP10.31□□□□□ -0.76
COL4A6-202ENST00000372216 VGLL3A8MV65 326 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 DDNO94850 711 aaPredicted RBP10.31□□□□□ -0.76
COL4A6-202ENST00000372216 MAP4P27816 1152 aaKnown RBP10.31□□□□□ -0.76
COL4A6-202ENST00000372216 PRAMEP78395 509 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 PWP1Q13610 501 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 STILQ15468 1287 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 NBPF12Q5TAG4 269 aaPredicted RBP10.31□□□□□ -0.76
COL4A6-202ENST00000372216 ALS2CLQ60I27 953 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 FBXO16Q8IX29 292 aaPredicted RBP10.31□□□□□ -0.76
COL4A6-202ENST00000372216 IQGAP1P46940 1657 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 TRIM48Q8IWZ4 208 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 SLC25A41Q8N5S1 370 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 EFHBQ8N7U6 833 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 STKLD1Q8NE28 680 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 C18orf8Q96DM3 657 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 ZNF512Q96ME7 567 aaPredicted RBP10.31□□□□□ -0.76
COL4A6-202ENST00000372216 MED15Q96RN5 788 aa10.31□□□□□ -0.76
COL4A6-202ENST00000372216 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.31□□□□□ -0.76
COL4A6-202ENST00000372216 UBXN8O00124 270 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 MEFVO15553 781 aaPredicted RBP10.3□□□□□ -0.76
COL4A6-202ENST00000372216 KCNA2P16389 499 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 FMO5P49326 533 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 HSD17B4P51659 736 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 CAV1Q03135 178 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 GOLGA7BQ2TAP0 167 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 RRM2BQ7LG56 351 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 ZC3H18Q86VM9 953 aaKnown RBP10.3□□□□□ -0.76
COL4A6-202ENST00000372216 RAB42Q8N4Z0 105 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 RBBP8NLQ8NC74 664 aaPredicted RBP10.3□□□□□ -0.76
COL4A6-202ENST00000372216 RTFDC1Q9BY42 306 aaPredicted RBP10.3□□□□□ -0.76
COL4A6-202ENST00000372216 AIPL1Q9NZN9 384 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 ADGRA2Q96PE1 1338 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 IGSF9BQ9UPX0 1349 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 CCT5P48643 541 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 RAP1GDS1P52306 607 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 C1orf54Q8WWF1 131 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 HSPA8P11142 646 aaKnown RBP10.3□□□□□ -0.76
COL4A6-202ENST00000372216 SCP2P22307 547 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 KLHL38Q2WGJ6 581 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 MFN1Q8IWA4 741 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 SNX31Q8N9S9 440 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 ABCB6Q9NP58 842 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 FGFR1OP2Q9NVK5 253 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 ZNF212Q9UDV6 495 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 APOA4P06727 396 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 GCKP35557 465 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 KRT17Q04695 432 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 CXCL9Q07325 125 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 TAF11Q15544 211 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 RFFLQ8WZ73 363 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 NAF1Q96HR8 494 aaKnown RBP10.3□□□□□ -0.76
COL4A6-202ENST00000372216 OSBPL9Q96SU4 736 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.3□□□□□ -0.76
COL4A6-202ENST00000372216 FAM49BQ9NUQ9 324 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 A0A1W2PQC6 194 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 ZNF263O14978 683 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 MSH4O15457 936 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 CCDC159P0C7I6 412 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 SP100P23497 879 aaPredicted RBP10.3□□□□□ -0.76
COL4A6-202ENST00000372216 SOAT1P35610 550 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 GCLCP48506 637 aaPredicted RBP10.3□□□□□ -0.76
COL4A6-202ENST00000372216 SGO1Q5FBB7 561 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 EXOC4Q96A65 974 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 ARL8AQ96BM9 186 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 KIFC3Q9BVG8 833 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 TEX12Q9BXU0 123 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 EIF3DO15371 548 aaKnown RBP eCLIP10.3□□□□□ -0.76
COL4A6-202ENST00000372216 PJA2O43164 708 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 KRT38O76015 456 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 IGFBP4P22692 258 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 FXR2P51116 673 aaKnown RBP eCLIP10.3□□□□□ -0.76
COL4A6-202ENST00000372216 ATXN3P54252 364 aaPredicted RBP10.3□□□□□ -0.76
COL4A6-202ENST00000372216 COPS2P61201 443 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 TJAP1Q5JTD0 557 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 PID1Q7Z2X4 250 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 CRLF3Q8IUI8 442 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 C10orf53Q8N6V4 93 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 ZFP42Q96MM3 310 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 TMEM60Q9H2L4 133 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 MROH8Q9H579 483 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 ANKEF1Q9NU02 776 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 KLK14Q9P0G3 267 aa10.3□□□□□ -0.76
COL4A6-202ENST00000372216 PDIA2Q13087 525 aaKnown RBP10.29□□□□□ -0.76
COL4A6-202ENST00000372216 PDCLQ13371 301 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 MKRN4PQ13434 485 aaPredicted RBP10.29□□□□□ -0.76
COL4A6-202ENST00000372216 RGS9BPQ6ZS82 235 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 CACUL1Q86Y37 369 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 RDM1Q8NG50 284 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 SNF8Q96H20 258 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 STK33Q9BYT3 514 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 ALDH1A3P47895 512 aa10.29□□□□□ -0.76
COL4A6-202ENST00000372216 MMP14P50281 582 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms