RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 LRRN2O75325 713 aa19.83■□□□□ 0.76
VEGFA-206ENST00000372077 VNN1O95497 513 aa19.83■□□□□ 0.76
VEGFA-206ENST00000372077 RABGGTAQ92696 567 aa19.83■□□□□ 0.76
VEGFA-206ENST00000372077 SECISBP2LQ93073 1101 aaKnown RBP19.83■□□□□ 0.76
VEGFA-206ENST00000372077 IPPQ9Y573 584 aa19.83■□□□□ 0.76
VEGFA-206ENST00000372077 FAAP100Q0VG06 881 aa19.82■□□□□ 0.76
VEGFA-206ENST00000372077 ALKAL1Q6UXT8 129 aa19.82■□□□□ 0.76
VEGFA-206ENST00000372077 MMS19Q96T76 1030 aa19.82■□□□□ 0.76
VEGFA-206ENST00000372077 C11orf49Q9H6J7 331 aa19.82■□□□□ 0.76
VEGFA-206ENST00000372077 APEX2Q9UBZ4 518 aa19.82■□□□□ 0.76
VEGFA-206ENST00000372077 HES2Q9Y543 173 aa19.82■□□□□ 0.76
VEGFA-206ENST00000372077 DCDC2CA8MYV0 355 aa19.82■□□□□ 0.76
VEGFA-206ENST00000372077 TRIM60Q495X7 471 aa19.82■□□□□ 0.76
VEGFA-206ENST00000372077 PHLDB3Q6NSJ2 640 aa19.82■□□□□ 0.76
VEGFA-206ENST00000372077 WDR59Q6PJI9 974 aa19.82■□□□□ 0.76
VEGFA-206ENST00000372077 CACNA2D4Q7Z3S7 1137 aa19.82■□□□□ 0.76
VEGFA-206ENST00000372077 NT5DC4Q86YG4 428 aa19.82■□□□□ 0.76
VEGFA-206ENST00000372077 SNX27Q96L92 541 aa19.82■□□□□ 0.76
VEGFA-206ENST00000372077 NLRC4Q9NPP4 1024 aa19.82■□□□□ 0.76
VEGFA-206ENST00000372077 RALGAPA2Q2PPJ7 1873 aa19.81■□□□□ 0.76
VEGFA-206ENST00000372077 CTAGE15A4D2H0 777 aa19.81■□□□□ 0.76
VEGFA-206ENST00000372077 HLA-DRAP01903 254 aa19.81■□□□□ 0.76
VEGFA-206ENST00000372077 CTAGE8P0CG41 777 aa19.81■□□□□ 0.76
VEGFA-206ENST00000372077 TLE2Q04725 743 aa19.81■□□□□ 0.76
VEGFA-206ENST00000372077 JADE1Q6IE81 842 aa19.81■□□□□ 0.76
VEGFA-206ENST00000372077 PDXDC1Q6P996 788 aa19.81■□□□□ 0.76
VEGFA-206ENST00000372077 TRAPPC11Q7Z392 1133 aa19.81■□□□□ 0.76
VEGFA-206ENST00000372077 CTAGE6Q86UF2 777 aa19.81■□□□□ 0.76
VEGFA-206ENST00000372077 DNAAF5Q86Y56 855 aa19.81■□□□□ 0.76
VEGFA-206ENST00000372077 CTAGE4Q8IX94 777 aa19.81■□□□□ 0.76
VEGFA-206ENST00000372077 PAWRQ96IZ0 340 aaKnown RBP19.81■□□□□ 0.76
VEGFA-206ENST00000372077 FAM105AQ9NUU6 356 aa19.81■□□□□ 0.76
VEGFA-206ENST00000372077 MGEA5O60502 916 aa19.81■□□□□ 0.76
VEGFA-206ENST00000372077 HNRNPH3P31942 346 aaKnown RBP19.81■□□□□ 0.76
VEGFA-206ENST00000372077 YARSP54577 528 aaKnown RBP19.81■□□□□ 0.76
VEGFA-206ENST00000372077 XKR4Q5GH76 650 aa19.81■□□□□ 0.76
VEGFA-206ENST00000372077 IQCEQ6IPM2 695 aa19.81■□□□□ 0.76
VEGFA-206ENST00000372077 ANKRD36BP1Q96IX9 119 aa19.81■□□□□ 0.76
VEGFA-206ENST00000372077 MTMR12Q9C0I1 747 aa19.81■□□□□ 0.76
VEGFA-206ENST00000372077 RNF39Q9H2S5 420 aa19.81■□□□□ 0.76
VEGFA-206ENST00000372077 AJAP1Q9UKB5 411 aaPredicted RBP19.81■□□□□ 0.76
VEGFA-206ENST00000372077 DERAQ9Y315 318 aa19.81■□□□□ 0.76
VEGFA-206ENST00000372077 C2CD2Q9Y426 696 aa19.81■□□□□ 0.76
VEGFA-206ENST00000372077 PCDHB2Q9Y5E7 798 aa19.81■□□□□ 0.76
VEGFA-206ENST00000372077 CCDC66A2RUB6 948 aa19.8■□□□□ 0.76
VEGFA-206ENST00000372077 ZC3H11AO75152 810 aaKnown RBP eCLIP19.8■□□□□ 0.764e-14■■■■■ 46.5
VEGFA-206ENST00000372077 RECQL4O94761 1208 aa19.8■□□□□ 0.76
VEGFA-206ENST00000372077 NFICP08651 508 aa19.8■□□□□ 0.76
VEGFA-206ENST00000372077 RFX1P22670 979 aa19.8■□□□□ 0.76
VEGFA-206ENST00000372077 BIRC3Q13489 604 aa19.8■□□□□ 0.76
VEGFA-206ENST00000372077 GPNMBQ14956 572 aa19.8■□□□□ 0.76
VEGFA-206ENST00000372077 GJB7Q6PEY0 223 aa19.8■□□□□ 0.76
VEGFA-206ENST00000372077 TMTC1Q8IUR5 882 aa19.8■□□□□ 0.76
VEGFA-206ENST00000372077 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.8■□□□□ 0.76
VEGFA-206ENST00000372077 MYO6Q9UM54 1294 aa19.8■□□□□ 0.76
VEGFA-206ENST00000372077 FAN1Q9Y2M0 1017 aa19.8■□□□□ 0.76
VEGFA-206ENST00000372077 CITO14578 2027 aa19.8■□□□□ 0.76
VEGFA-206ENST00000372077 DNAH12Q6ZR08 3092 aa19.8■□□□□ 0.76
VEGFA-206ENST00000372077 TMEM191BP0C7N4 346 aa19.8■□□□□ 0.76
VEGFA-206ENST00000372077 TFAMQ00059 246 aaKnown RBP19.8■□□□□ 0.76
VEGFA-206ENST00000372077 ARID5AQ03989 594 aa19.8■□□□□ 0.76
VEGFA-206ENST00000372077 RRAGAQ7L523 313 aa19.8■□□□□ 0.76
VEGFA-206ENST00000372077 MRPL10Q7Z7H8 261 aaKnown RBP19.8■□□□□ 0.76
VEGFA-206ENST00000372077 NUCKS1Q9H1E3 243 aaKnown RBP19.8■□□□□ 0.76
VEGFA-206ENST00000372077 CNTN3Q9P232 1028 aa19.8■□□□□ 0.76
VEGFA-206ENST00000372077 PLAGL2Q9UPG8 496 aa19.8■□□□□ 0.76
VEGFA-206ENST00000372077 ZNF623O75123 536 aa19.8■□□□□ 0.76
VEGFA-206ENST00000372077 TNNC2P02585 160 aa19.8■□□□□ 0.76
VEGFA-206ENST00000372077 RNASE9P60153 205 aaKnown RBP19.8■□□□□ 0.76
VEGFA-206ENST00000372077 MEA1Q16626 185 aa19.8■□□□□ 0.76
VEGFA-206ENST00000372077 TSR1Q2NL82 804 aaKnown RBP19.8■□□□□ 0.76
VEGFA-206ENST00000372077 ARHGEF19Q8IW93 802 aa19.8■□□□□ 0.76
VEGFA-206ENST00000372077 SYN2Q92777 582 aaPredicted RBP19.8■□□□□ 0.76
VEGFA-206ENST00000372077 DNAJC12Q9UKB3 198 aa19.8■□□□□ 0.76
VEGFA-206ENST00000372077 LRRC53A6NM62 1247 aa19.79■□□□□ 0.76
VEGFA-206ENST00000372077 AKAP5P24588 427 aa19.79■□□□□ 0.76
VEGFA-206ENST00000372077 JAM2P57087 298 aa19.79■□□□□ 0.76
VEGFA-206ENST00000372077 TSPAN18Q96SJ8 248 aa19.79■□□□□ 0.76
VEGFA-206ENST00000372077 STK33Q9BYT3 514 aa19.79■□□□□ 0.76
VEGFA-206ENST00000372077 CXCL16Q9H2A7 254 aa19.79■□□□□ 0.76
VEGFA-206ENST00000372077 CST3P01034 146 aaPredicted RBP19.79■□□□□ 0.76
VEGFA-206ENST00000372077 TUBB4AP04350 444 aa19.79■□□□□ 0.76
VEGFA-206ENST00000372077 PIK3CAP42336 1068 aa19.79■□□□□ 0.76
VEGFA-206ENST00000372077 C2orf54Q08AI8 447 aa19.79■□□□□ 0.76
VEGFA-206ENST00000372077 TMEM132DQ14C87 1099 aa19.79■□□□□ 0.76
VEGFA-206ENST00000372077 ZBTB6Q15916 424 aa19.79■□□□□ 0.76
VEGFA-206ENST00000372077 SCARA3Q6AZY7 606 aa19.79■□□□□ 0.76
VEGFA-206ENST00000372077 FAM43BQ6ZT52 329 aaPredicted RBP19.79■□□□□ 0.76
VEGFA-206ENST00000372077 IFIH1Q9BYX4 1025 aaKnown RBP19.79■□□□□ 0.76
VEGFA-206ENST00000372077 NBNO60934 754 aa19.78■□□□□ 0.76
VEGFA-206ENST00000372077 RAB27AP51159 221 aa19.78■□□□□ 0.76
VEGFA-206ENST00000372077 NCOA4Q13772 614 aa19.78■□□□□ 0.76
VEGFA-206ENST00000372077 FOXR1Q6PIV2 292 aa19.78■□□□□ 0.76
VEGFA-206ENST00000372077 NECAB2Q7Z6G3 386 aa19.78■□□□□ 0.76
VEGFA-206ENST00000372077 CXorf38Q8TB03 319 aa19.78■□□□□ 0.76
VEGFA-206ENST00000372077 HELQQ8TDG4 1101 aa19.78■□□□□ 0.76
VEGFA-206ENST00000372077 ZMAT2Q96NC0 199 aaKnown RBP19.78■□□□□ 0.76
VEGFA-206ENST00000372077 NT5C1BQ96P26 610 aa19.78■□□□□ 0.76
VEGFA-206ENST00000372077 ADAM2Q99965 735 aa19.78■□□□□ 0.76
VEGFA-206ENST00000372077 APOL6Q9BWW8 343 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms