RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 PHF2O75151 1096 aa12.52□□□□□ -0.41
PDE6C-201ENST00000371447 PIAS1O75925 651 aa12.52□□□□□ -0.41
PDE6C-201ENST00000371447 GZMAP12544 262 aa12.52□□□□□ -0.41
PDE6C-201ENST00000371447 NAMPTP43490 491 aa12.52□□□□□ -0.41
PDE6C-201ENST00000371447 KRT17Q04695 432 aa12.52□□□□□ -0.41
PDE6C-201ENST00000371447 CALCOCO2Q13137 446 aa12.52□□□□□ -0.41
PDE6C-201ENST00000371447 WDR72Q3MJ13 1102 aa12.52□□□□□ -0.41
PDE6C-201ENST00000371447 KCNT1Q5JUK3 1230 aa12.52□□□□□ -0.41
PDE6C-201ENST00000371447 DENND2CQ68D51 928 aa12.52□□□□□ -0.41
PDE6C-201ENST00000371447 EFCAB12Q6NXP0 572 aa12.52□□□□□ -0.41
PDE6C-201ENST00000371447 EPS8L3Q8TE67 593 aaKnown RBP12.52□□□□□ -0.41
PDE6C-201ENST00000371447 C12orf42Q96LP6 360 aa12.52□□□□□ -0.41
PDE6C-201ENST00000371447 FBXL18Q96ME1 805 aa12.52□□□□□ -0.41
PDE6C-201ENST00000371447 MCEEQ96PE7 176 aa12.52□□□□□ -0.41
PDE6C-201ENST00000371447 DDX23Q9BUQ8 820 aaKnown RBP12.52□□□□□ -0.41
PDE6C-201ENST00000371447 C17orf75Q9HAS0 396 aa12.52□□□□□ -0.41
PDE6C-201ENST00000371447 EBAG9O00559 213 aa12.52□□□□□ -0.41
PDE6C-201ENST00000371447 KIAA0391O15091 583 aaKnown RBP12.52□□□□□ -0.41
PDE6C-201ENST00000371447 PMS2P54278 862 aa12.52□□□□□ -0.41
PDE6C-201ENST00000371447 GHRHRQ02643 423 aa12.52□□□□□ -0.41
PDE6C-201ENST00000371447 NEDD9Q14511 834 aa12.52□□□□□ -0.41
PDE6C-201ENST00000371447 PSMD6Q15008 389 aa12.52□□□□□ -0.41
PDE6C-201ENST00000371447 C9orf131Q5VYM1 1079 aa12.52□□□□□ -0.41
PDE6C-201ENST00000371447 MINDY3Q9H8M7 445 aa12.52□□□□□ -0.41
PDE6C-201ENST00000371447 ZWILCHQ9H900 591 aa12.52□□□□□ -0.41
PDE6C-201ENST00000371447 MROH7Q68CQ1 1323 aa12.51□□□□□ -0.41
PDE6C-201ENST00000371447 EIF3HO15372 352 aaKnown RBP eCLIP12.51□□□□□ -0.41
PDE6C-201ENST00000371447 ADCY3O60266 1144 aa12.51□□□□□ -0.41
PDE6C-201ENST00000371447 PPFIA4O75335 1185 aa12.51□□□□□ -0.41
PDE6C-201ENST00000371447 LSP1P33241 339 aa12.51□□□□□ -0.41
PDE6C-201ENST00000371447 COILP38432 576 aaPredicted RBP12.51□□□□□ -0.41
PDE6C-201ENST00000371447 IFI35P80217 286 aaPredicted RBP12.51□□□□□ -0.41
PDE6C-201ENST00000371447 WNT8AQ9H1J5 351 aa12.51□□□□□ -0.41
PDE6C-201ENST00000371447 COQ4Q9Y3A0 265 aa12.51□□□□□ -0.41
PDE6C-201ENST00000371447 A0A0B4J269 797 aa12.51□□□□□ -0.41
PDE6C-201ENST00000371447 F8VP50 259 aa12.51□□□□□ -0.41
PDE6C-201ENST00000371447 ECEL1O95672 775 aa12.51□□□□□ -0.41
PDE6C-201ENST00000371447 ZSCAN5DPP0CG00 497 aa12.51□□□□□ -0.41
PDE6C-201ENST00000371447 POTEJP0CG39 1038 aa12.51□□□□□ -0.41
PDE6C-201ENST00000371447 LRRC14Q15048 493 aa12.51□□□□□ -0.41
PDE6C-201ENST00000371447 LONRF1Q17RB8 773 aa12.51□□□□□ -0.41
PDE6C-201ENST00000371447 CYP4F22Q6NT55 531 aa12.51□□□□□ -0.41
PDE6C-201ENST00000371447 ZBTB8OSQ8IWT0 167 aa12.51□□□□□ -0.41
PDE6C-201ENST00000371447 EMC1Q8N766 993 aa12.51□□□□□ -0.41
PDE6C-201ENST00000371447 ZNF606Q8WXB4 792 aa12.51□□□□□ -0.41
PDE6C-201ENST00000371447 SENP7Q9BQF6 1050 aa12.51□□□□□ -0.41
PDE6C-201ENST00000371447 RBPJLQ9UBG7 517 aa12.51□□□□□ -0.41
PDE6C-201ENST00000371447 PCSK1NQ9UHG2 260 aa12.51□□□□□ -0.41
PDE6C-201ENST00000371447 ZNF646O15015 1829 aaPredicted RBP12.51□□□□□ -0.41
PDE6C-201ENST00000371447 MYPNQ86TC9 1320 aa12.51□□□□□ -0.41
PDE6C-201ENST00000371447 GOLGA8MH3BSY2 632 aa12.5□□□□□ -0.41
PDE6C-201ENST00000371447 CYP1A2P05177 515 aa12.5□□□□□ -0.41
PDE6C-201ENST00000371447 CLTAP09496 248 aa12.5□□□□□ -0.41
PDE6C-201ENST00000371447 ARL2P36404 184 aa12.5□□□□□ -0.41
PDE6C-201ENST00000371447 ADCY2Q08462 1091 aa12.5□□□□□ -0.41
PDE6C-201ENST00000371447 LIN9Q5TKA1 542 aa12.5□□□□□ -0.41
PDE6C-201ENST00000371447 DUPD1Q68J44 220 aa12.5□□□□□ -0.41
PDE6C-201ENST00000371447 GPAT2Q6NUI2 795 aa12.5□□□□□ -0.41
PDE6C-201ENST00000371447 C11orf63Q6NUN7 778 aa12.5□□□□□ -0.41
PDE6C-201ENST00000371447 METTL7BQ6UX53 244 aa12.5□□□□□ -0.41
PDE6C-201ENST00000371447 APOL6Q9BWW8 343 aa12.5□□□□□ -0.41
PDE6C-201ENST00000371447 FAM49AQ9H0Q0 323 aaPredicted RBP12.5□□□□□ -0.41
PDE6C-201ENST00000371447 GINM1Q9NU53 330 aa12.5□□□□□ -0.41
PDE6C-201ENST00000371447 NFASCO94856 1347 aa12.5□□□□□ -0.41
PDE6C-201ENST00000371447 GRAP2O75791 330 aa12.5□□□□□ -0.41
PDE6C-201ENST00000371447 TNFRSF8P28908 595 aa12.5□□□□□ -0.41
PDE6C-201ENST00000371447 LACTBP83111 547 aaPredicted RBP12.5□□□□□ -0.41
PDE6C-201ENST00000371447 POU5F1Q01860 360 aaKnown RBP12.5□□□□□ -0.41
PDE6C-201ENST00000371447 GCNT1Q02742 428 aa12.5□□□□□ -0.41
PDE6C-201ENST00000371447 ZNF699Q32M78 642 aa12.5□□□□□ -0.41
PDE6C-201ENST00000371447 TXNRD3NBQ6F5E7 133 aa12.5□□□□□ -0.41
PDE6C-201ENST00000371447 SLFN12LQ6IEE8 588 aa12.5□□□□□ -0.41
PDE6C-201ENST00000371447 ANKS1BQ7Z6G8 1248 aa12.5□□□□□ -0.41
PDE6C-201ENST00000371447 RIOX2Q8IUF8 465 aa12.5□□□□□ -0.41
PDE6C-201ENST00000371447 MSL3Q8N5Y2 521 aaKnown RBP12.5□□□□□ -0.41
PDE6C-201ENST00000371447 DNERQ8NFT8 737 aa12.5□□□□□ -0.41
PDE6C-201ENST00000371447 CDCA5Q96FF9 252 aa12.5□□□□□ -0.41
PDE6C-201ENST00000371447 MRPL4Q9BYD3 311 aaKnown RBP12.5□□□□□ -0.41
PDE6C-201ENST00000371447 TSPYL1Q9H0U9 437 aa12.5□□□□□ -0.41
PDE6C-201ENST00000371447 TMBIM4Q9HC24 238 aa12.5□□□□□ -0.41
PDE6C-201ENST00000371447 CISHQ9NSE2 258 aa12.5□□□□□ -0.41
PDE6C-201ENST00000371447 PCDHA3Q9Y5H8 950 aa12.5□□□□□ -0.41
PDE6C-201ENST00000371447 CES2O00748 559 aa12.5□□□□□ -0.41
PDE6C-201ENST00000371447 ETS1P14921 441 aa12.5□□□□□ -0.41
PDE6C-201ENST00000371447 MAP1SQ66K74 1059 aaPredicted RBP12.5□□□□□ -0.41
PDE6C-201ENST00000371447 SRLQ86TD4 932 aa12.5□□□□□ -0.41
PDE6C-201ENST00000371447 LRRN4Q8WUT4 740 aa12.5□□□□□ -0.41
PDE6C-201ENST00000371447 C9orf72Q96LT7 481 aa12.5□□□□□ -0.41
PDE6C-201ENST00000371447 MTRF1LQ9UGC7 380 aaKnown RBP12.5□□□□□ -0.41
PDE6C-201ENST00000371447 SSC5DA1L4H1 1573 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 GRIN2DO15399 1336 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 LRRD1A4D1F6 860 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 MAP3K6O95382 1288 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 UNGP13051 313 aaPredicted RBP12.49□□□□□ -0.41
PDE6C-201ENST00000371447 CHRNA3P32297 505 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 CHKAP35790 457 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 KYNUQ16719 465 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 ZDHHC24Q6UX98 284 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 MICALL1Q8N3F8 863 aa12.49□□□□□ -0.41
PDE6C-201ENST00000371447 ANKRD42Q8N9B4 389 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms