RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 ADAMTS1Q9UHI8 967 aa25.65■■□□□ 1.7
SNX3-203ENST00000368979 TFRCP02786 760 aaKnown RBP25.64■■□□□ 1.7
SNX3-203ENST00000368979 POLR2BP30876 1174 aaKnown RBP25.64■■□□□ 1.7
SNX3-203ENST00000368979 ARHGAP25P42331 645 aa25.64■■□□□ 1.7
SNX3-203ENST00000368979 GUCY2FP51841 1108 aa25.64■■□□□ 1.7
SNX3-203ENST00000368979 BMS1Q14692 1282 aaKnown RBP25.64■■□□□ 1.7
SNX3-203ENST00000368979 LRRC8DQ7L1W4 858 aa25.64■■□□□ 1.7
SNX3-203ENST00000368979 FAXDC2Q96IV6 333 aa25.64■■□□□ 1.7
SNX3-203ENST00000368979 KLK14Q9P0G3 267 aa25.64■■□□□ 1.7
SNX3-203ENST00000368979 NENFQ9UMX5 172 aa25.64■■□□□ 1.7
SNX3-203ENST00000368979 SMIM28A0A1B0GU29 152 aa25.63■■□□□ 1.69
SNX3-203ENST00000368979 CYP26A1O43174 497 aa25.63■■□□□ 1.69
SNX3-203ENST00000368979 OFD1O75665 1012 aa25.63■■□□□ 1.69
SNX3-203ENST00000368979 STAU1O95793 577 aaKnown RBP25.63■■□□□ 1.69
SNX3-203ENST00000368979 SELPP16109 830 aa25.63■■□□□ 1.69
SNX3-203ENST00000368979 USP8P40818 1118 aa25.63■■□□□ 1.69
SNX3-203ENST00000368979 RAB27AP51159 221 aa25.63■■□□□ 1.69
SNX3-203ENST00000368979 VAV2P52735 878 aa25.63■■□□□ 1.69
SNX3-203ENST00000368979 BFSP2Q13515 415 aa25.63■■□□□ 1.69
SNX3-203ENST00000368979 PTPN14Q15678 1187 aa25.63■■□□□ 1.69
SNX3-203ENST00000368979 SMYD5Q6GMV2 418 aa25.63■■□□□ 1.69
SNX3-203ENST00000368979 SLC39A5Q6ZMH5 540 aa25.63■■□□□ 1.69
SNX3-203ENST00000368979 MRPL10Q7Z7H8 261 aaKnown RBP25.63■■□□□ 1.69
SNX3-203ENST00000368979 VPS36Q86VN1 386 aa25.63■■□□□ 1.69
SNX3-203ENST00000368979 HACE1Q8IYU2 909 aa25.63■■□□□ 1.69
SNX3-203ENST00000368979 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP25.63■■□□□ 1.69
SNX3-203ENST00000368979 UBQLN1Q9UMX0 589 aaKnown RBP25.63■■□□□ 1.69
SNX3-203ENST00000368979 CNTN6Q9UQ52 1028 aa25.63■■□□□ 1.69
SNX3-203ENST00000368979 PCDHA13Q9Y5I0 950 aa25.63■■□□□ 1.69
SNX3-203ENST00000368979 TRIP11Q15643 1979 aa25.63■■□□□ 1.69
SNX3-203ENST00000368979 ZNF623O75123 536 aa25.63■■□□□ 1.69
SNX3-203ENST00000368979 CLSTN1O94985 981 aa25.63■■□□□ 1.69
SNX3-203ENST00000368979 COL6A1P12109 1028 aa25.63■■□□□ 1.69
SNX3-203ENST00000368979 ASPAP45381 313 aa25.63■■□□□ 1.69
SNX3-203ENST00000368979 RBP5P82980 135 aa25.63■■□□□ 1.69
SNX3-203ENST00000368979 GLRA4Q5JXX5 417 aa25.63■■□□□ 1.69
SNX3-203ENST00000368979 ANKRD33Q7Z3H0 272 aa25.63■■□□□ 1.69
SNX3-203ENST00000368979 BEST2Q8NFU1 509 aa25.63■■□□□ 1.69
SNX3-203ENST00000368979 SLC30A5Q8TAD4 765 aa25.63■■□□□ 1.69
SNX3-203ENST00000368979 LNX1Q8TBB1 728 aaPredicted RBP25.63■■□□□ 1.69
SNX3-203ENST00000368979 EPS8L1Q8TE68 723 aa25.63■■□□□ 1.69
SNX3-203ENST00000368979 IFIH1Q9BYX4 1025 aaKnown RBP25.63■■□□□ 1.69
SNX3-203ENST00000368979 TUBGCP4Q9UGJ1 667 aa25.63■■□□□ 1.69
SNX3-203ENST00000368979 NOCTQ9UK39 431 aaKnown RBP25.63■■□□□ 1.69
SNX3-203ENST00000368979 AGAP1Q9UPQ3 857 aa25.63■■□□□ 1.69
SNX3-203ENST00000368979 DDX3XO00571 662 aaKnown RBP eCLIP25.62■■□□□ 1.696e-33■■■■□ 21.4
SNX3-203ENST00000368979 ITGA4P13612 1032 aa25.62■■□□□ 1.69
SNX3-203ENST00000368979 GJA8P48165 433 aa25.62■■□□□ 1.69
SNX3-203ENST00000368979 KIAA1328Q86T90 577 aa25.62■■□□□ 1.69
SNX3-203ENST00000368979 C18orf25Q96B23 403 aaPredicted RBP25.62■■□□□ 1.69
SNX3-203ENST00000368979 LZTFL1Q9NQ48 299 aa25.62■■□□□ 1.69
SNX3-203ENST00000368979 BRCA2P51587 3418 aa25.61■■□□□ 1.69
SNX3-203ENST00000368979 RCCD1A6NED2 376 aa25.61■■□□□ 1.69
SNX3-203ENST00000368979 MEIS3P2A8K0S8 358 aa25.61■■□□□ 1.69
SNX3-203ENST00000368979 PITPNM1O00562 1244 aa25.61■■□□□ 1.69
SNX3-203ENST00000368979 TLR3O15455 904 aaKnown RBP25.61■■□□□ 1.69
SNX3-203ENST00000368979 PQBP1O60828 265 aaKnown RBP25.61■■□□□ 1.69
SNX3-203ENST00000368979 KRT5P13647 590 aa25.61■■□□□ 1.69
SNX3-203ENST00000368979 ZNF667Q5HYK9 610 aa25.61■■□□□ 1.69
SNX3-203ENST00000368979 C1orf53Q5VUE5 145 aa25.61■■□□□ 1.69
SNX3-203ENST00000368979 NOP9Q86U38 636 aaKnown RBP25.61■■□□□ 1.69
SNX3-203ENST00000368979 SLC47A2Q86VL8 602 aa25.61■■□□□ 1.69
SNX3-203ENST00000368979 SLC20A1Q8WUM9 679 aa25.61■■□□□ 1.69
SNX3-203ENST00000368979 AGPAT1Q99943 283 aa25.61■■□□□ 1.69
SNX3-203ENST00000368979 ADAM2Q99965 735 aa25.61■■□□□ 1.69
SNX3-203ENST00000368979 BCO2Q9BYV7 579 aa25.61■■□□□ 1.69
SNX3-203ENST00000368979 NAGPAQ9UK23 515 aa25.61■■□□□ 1.69
SNX3-203ENST00000368979 TANC1Q9C0D5 1861 aa25.6■■□□□ 1.69
SNX3-203ENST00000368979 A0A0U1RQF3 1178 aa25.6■■□□□ 1.69
SNX3-203ENST00000368979 PTGESO14684 152 aa25.6■■□□□ 1.69
SNX3-203ENST00000368979 XPOTO43592 962 aaKnown RBP25.6■■□□□ 1.69
SNX3-203ENST00000368979 ABL1P00519 1130 aa25.6■■□□□ 1.69
SNX3-203ENST00000368979 TNNT1P13805 278 aa25.6■■□□□ 1.69
SNX3-203ENST00000368979 CYP11B1P15538 503 aa25.6■■□□□ 1.69
SNX3-203ENST00000368979 CYP3A5P20815 502 aa25.6■■□□□ 1.69
SNX3-203ENST00000368979 MAGEA1P43355 309 aa25.6■■□□□ 1.69
SNX3-203ENST00000368979 ATN1P54259 1190 aaPredicted RBP25.6■■□□□ 1.69
SNX3-203ENST00000368979 ARHGAP29Q52LW3 1261 aa25.6■■□□□ 1.69
SNX3-203ENST00000368979 ANKLE1Q8NAG6 615 aa25.6■■□□□ 1.69
SNX3-203ENST00000368979 HPDLQ96IR7 371 aa25.6■■□□□ 1.69
SNX3-203ENST00000368979 POLIQ9UNA4 740 aa25.6■■□□□ 1.69
SNX3-203ENST00000368979 TFR2Q9UP52 801 aa25.6■■□□□ 1.69
SNX3-203ENST00000368979 GIT1Q9Y2X7 761 aa25.6■■□□□ 1.69
SNX3-203ENST00000368979 KIF2AO00139 706 aaPredicted RBP25.59■■□□□ 1.69
SNX3-203ENST00000368979 ATF7P17544 494 aaPredicted RBP25.59■■□□□ 1.69
SNX3-203ENST00000368979 PDE6CP51160 858 aa25.59■■□□□ 1.69
SNX3-203ENST00000368979 WDR72Q3MJ13 1102 aa25.59■■□□□ 1.69
SNX3-203ENST00000368979 AGMOQ6ZNB7 445 aa25.59■■□□□ 1.69
SNX3-203ENST00000368979 GLYCTKQ8IVS8 523 aa25.59■■□□□ 1.69
SNX3-203ENST00000368979 DIS3LQ8TF46 1054 aaKnown RBP25.59■■□□□ 1.69
SNX3-203ENST00000368979 LACRTQ9GZZ8 138 aa25.59■■□□□ 1.69
SNX3-203ENST00000368979 ACP6Q9NPH0 428 aa25.59■■□□□ 1.69
SNX3-203ENST00000368979 RNF19AQ9NV58 838 aa25.59■■□□□ 1.69
SNX3-203ENST00000368979 R3HCC1Q9Y3T6 440 aaKnown RBP25.59■■□□□ 1.69
SNX3-203ENST00000368979 PCDHB4Q9Y5E5 795 aa25.59■■□□□ 1.69
SNX3-203ENST00000368979 ATP8B3O60423 1300 aa25.59■■□□□ 1.69
SNX3-203ENST00000368979 ANO9A1A5B4 782 aa25.58■■□□□ 1.69
SNX3-203ENST00000368979 PJA2O43164 708 aa25.58■■□□□ 1.69
SNX3-203ENST00000368979 TUBB4AP04350 444 aa25.58■■□□□ 1.69
SNX3-203ENST00000368979 SKIP12755 728 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms