RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 DERAQ9Y315 318 aa20.59■□□□□ 0.89
CKS1B-203ENST00000368439 NR2E1Q9Y466 385 aa20.59■□□□□ 0.89
CKS1B-203ENST00000368439 NUB1Q9Y5A7 615 aa20.59■□□□□ 0.89
CKS1B-203ENST00000368439 CDY1Q9Y6F8 540 aa20.59■□□□□ 0.89
CKS1B-203ENST00000368439 FAM86C2PA6NEL3 165 aa20.58■□□□□ 0.89
CKS1B-203ENST00000368439 M0QZQ0 153 aa20.58■□□□□ 0.89
CKS1B-203ENST00000368439 PPEF2O14830 753 aa20.58■□□□□ 0.89
CKS1B-203ENST00000368439 NFICP08651 508 aa20.58■□□□□ 0.89
CKS1B-203ENST00000368439 CASP1P29466 404 aa20.58■□□□□ 0.89
CKS1B-203ENST00000368439 MCM4P33991 863 aa20.58■□□□□ 0.89
CKS1B-203ENST00000368439 ASIC1P78348 528 aa20.58■□□□□ 0.89
CKS1B-203ENST00000368439 KRT85P78386 507 aa20.58■□□□□ 0.89
CKS1B-203ENST00000368439 SLC8B1Q6J4K2 584 aa20.58■□□□□ 0.89
CKS1B-203ENST00000368439 ELMSAN1Q6PJG2 1045 aa20.58■□□□□ 0.89
CKS1B-203ENST00000368439 EPM2AIP1Q7L775 607 aaPredicted RBP20.58■□□□□ 0.89
CKS1B-203ENST00000368439 FAM212AQ96EL1 285 aa20.58■□□□□ 0.89
CKS1B-203ENST00000368439 PRKD2Q9BZL6 878 aa20.58■□□□□ 0.89
CKS1B-203ENST00000368439 TSHZ2Q9NRE2 1034 aa20.58■□□□□ 0.89
CKS1B-203ENST00000368439 USTQ9Y2C2 406 aa20.58■□□□□ 0.89
CKS1B-203ENST00000368439 TSC2P49815 1807 aa20.57■□□□□ 0.88
CKS1B-203ENST00000368439 XPOTO43592 962 aaKnown RBP20.57■□□□□ 0.88
CKS1B-203ENST00000368439 ACTN4O43707 911 aaKnown RBP20.57■□□□□ 0.88
CKS1B-203ENST00000368439 GARTP22102 1010 aa20.57■□□□□ 0.88
CKS1B-203ENST00000368439 CMA1P23946 247 aa20.57■□□□□ 0.88
CKS1B-203ENST00000368439 WNT7BP56706 349 aa20.57■□□□□ 0.88
CKS1B-203ENST00000368439 TMEM31Q5JXX7 168 aa20.57■□□□□ 0.88
CKS1B-203ENST00000368439 SPATA32Q96LK8 384 aa20.57■□□□□ 0.88
CKS1B-203ENST00000368439 NOTCH4Q99466 2003 aa20.57■□□□□ 0.88
CKS1B-203ENST00000368439 CBWD1Q9BRT8 395 aa20.57■□□□□ 0.88
CKS1B-203ENST00000368439 BLZF1Q9H2G9 400 aa20.57■□□□□ 0.88
CKS1B-203ENST00000368439 TMEM206Q9H813 350 aa20.57■□□□□ 0.88
CKS1B-203ENST00000368439 WDR6Q9NNW5 1121 aaKnown RBP20.57■□□□□ 0.88
CKS1B-203ENST00000368439 SERTAD1Q9UHV2 236 aa20.57■□□□□ 0.88
CKS1B-203ENST00000368439 PCDHB8Q9UN66 801 aa20.57■□□□□ 0.88
CKS1B-203ENST00000368439 HPSEQ9Y251 543 aa20.57■□□□□ 0.88
CKS1B-203ENST00000368439 PIRO00625 290 aa20.56■□□□□ 0.88
CKS1B-203ENST00000368439 PFKFB1P16118 471 aa20.56■□□□□ 0.88
CKS1B-203ENST00000368439 CUL4BQ13620 913 aa20.56■□□□□ 0.88
CKS1B-203ENST00000368439 TMEM132DQ14C87 1099 aa20.56■□□□□ 0.88
CKS1B-203ENST00000368439 CCDC149Q6ZUS6 474 aa20.56■□□□□ 0.88
CKS1B-203ENST00000368439 UNC13DQ70J99 1090 aa20.56■□□□□ 0.88
CKS1B-203ENST00000368439 EFCAB13Q8IY85 973 aa20.56■□□□□ 0.88
CKS1B-203ENST00000368439 GRAMD1CQ8IYS0 662 aa20.56■□□□□ 0.88
CKS1B-203ENST00000368439 ZDHHC14Q8IZN3 488 aa20.56■□□□□ 0.88
CKS1B-203ENST00000368439 ZNF507Q8TCN5 953 aa20.56■□□□□ 0.88
CKS1B-203ENST00000368439 SMG7Q92540 1137 aaKnown RBP20.56■□□□□ 0.88
CKS1B-203ENST00000368439 EDAQ92838 391 aa20.56■□□□□ 0.88
CKS1B-203ENST00000368439 SAAL1Q96ER3 474 aa20.56■□□□□ 0.88
CKS1B-203ENST00000368439 PYM1Q9BRP8 204 aaKnown RBP20.56■□□□□ 0.88
CKS1B-203ENST00000368439 C2CD2Q9Y426 696 aa20.56■□□□□ 0.88
CKS1B-203ENST00000368439 FAM237AA0A1B0GTK4 181 aa20.55■□□□□ 0.88
CKS1B-203ENST00000368439 A0A1B0GVL5 298 aa20.55■□□□□ 0.88
CKS1B-203ENST00000368439 ANO9A1A5B4 782 aa20.55■□□□□ 0.88
CKS1B-203ENST00000368439 EIF3DO15371 548 aaKnown RBP eCLIP20.55■□□□□ 0.88
CKS1B-203ENST00000368439 N4BP1O75113 896 aaKnown RBP20.55■□□□□ 0.88
CKS1B-203ENST00000368439 ABLIM3O94929 683 aa20.55■□□□□ 0.88
CKS1B-203ENST00000368439 SLFN14P0C7P3 912 aa20.55■□□□□ 0.88
CKS1B-203ENST00000368439 ZXDAP98168 799 aa20.55■□□□□ 0.88
CKS1B-203ENST00000368439 ROR1Q01973 937 aa20.55■□□□□ 0.88
CKS1B-203ENST00000368439 BECN1Q14457 450 aa20.55■□□□□ 0.88
CKS1B-203ENST00000368439 PTPN21Q16825 1174 aa20.55■□□□□ 0.88
CKS1B-203ENST00000368439 FAM26FQ5R3K3 315 aa20.55■□□□□ 0.88
CKS1B-203ENST00000368439 C9orf57Q5W0N0 161 aa20.55■□□□□ 0.88
CKS1B-203ENST00000368439 SYCP3Q8IZU3 236 aa20.55■□□□□ 0.88
CKS1B-203ENST00000368439 TDRD5Q8NAT2 981 aaKnown RBP20.55■□□□□ 0.88
CKS1B-203ENST00000368439 BEST2Q8NFU1 509 aa20.55■□□□□ 0.88
CKS1B-203ENST00000368439 FAM213AQ9BRX8 229 aa20.55■□□□□ 0.88
CKS1B-203ENST00000368439 FBXL5Q9UKA1 691 aa20.55■□□□□ 0.88
CKS1B-203ENST00000368439 CLUHO75153 1309 aa20.54■□□□□ 0.88
CKS1B-203ENST00000368439 PVALEFA0A1B0GWK0 134 aa20.54■□□□□ 0.88
CKS1B-203ENST00000368439 WDR27A2RRH5 827 aa20.54■□□□□ 0.88
CKS1B-203ENST00000368439 SPTLC1O15269 473 aa20.54■□□□□ 0.88
CKS1B-203ENST00000368439 KLRC4O43908 158 aa20.54■□□□□ 0.88
CKS1B-203ENST00000368439 C8AP07357 584 aa20.54■□□□□ 0.88
CKS1B-203ENST00000368439 HNRNPA1P09651 372 aaKnown RBP eCLIP20.54■□□□□ 0.88
CKS1B-203ENST00000368439 HOXA9P31269 272 aa20.54■□□□□ 0.88
CKS1B-203ENST00000368439 AFMP43652 599 aa20.54■□□□□ 0.88
CKS1B-203ENST00000368439 LILRA4P59901 499 aa20.54■□□□□ 0.88
CKS1B-203ENST00000368439 BRSK2Q8IWQ3 736 aa20.54■□□□□ 0.88
CKS1B-203ENST00000368439 APPL2Q8NEU8 664 aa20.54■□□□□ 0.88
CKS1B-203ENST00000368439 ZNF461Q8TAF7 563 aa20.54■□□□□ 0.88
CKS1B-203ENST00000368439 ATP6V1DQ9Y5K8 247 aa20.54■□□□□ 0.88
CKS1B-203ENST00000368439 GOLGA8IPA6NC78 632 aa20.53■□□□□ 0.88
CKS1B-203ENST00000368439 GOLGA8JA6NMD2 632 aa20.53■□□□□ 0.88
CKS1B-203ENST00000368439 PRR33A8MZF0 331 aa20.53■□□□□ 0.88
CKS1B-203ENST00000368439 H7C4K7 107 aa20.53■□□□□ 0.88
CKS1B-203ENST00000368439 OAZ2O95190 189 aa20.53■□□□□ 0.88
CKS1B-203ENST00000368439 IL18RAPO95256 599 aa20.53■□□□□ 0.88
CKS1B-203ENST00000368439 LDHAP00338 332 aaKnown RBP20.53■□□□□ 0.88
CKS1B-203ENST00000368439 UVSSAQ2YD98 709 aa20.53■□□□□ 0.88
CKS1B-203ENST00000368439 LIN9Q5TKA1 542 aa20.53■□□□□ 0.88
CKS1B-203ENST00000368439 STXBP4Q6ZWJ1 553 aa20.53■□□□□ 0.88
CKS1B-203ENST00000368439 PLCD3Q8N3E9 789 aa20.53■□□□□ 0.88
CKS1B-203ENST00000368439 SLC7A14Q8TBB6 771 aa20.53■□□□□ 0.88
CKS1B-203ENST00000368439 SCFD1Q8WVM8 642 aa20.53■□□□□ 0.88
CKS1B-203ENST00000368439 PAGE5Q96GU1 130 aa20.53■□□□□ 0.88
CKS1B-203ENST00000368439 SCAND2PQ9GZW5 306 aaPredicted RBP20.53■□□□□ 0.88
CKS1B-203ENST00000368439 PCIF1Q9H4Z3 704 aa20.53■□□□□ 0.88
CKS1B-203ENST00000368439 DPP3Q9NY33 737 aa20.53■□□□□ 0.88
CKS1B-203ENST00000368439 TIMM13Q9Y5L4 95 aaPredicted RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms