RNA–Protein interactions for RNA: ENST00000367818.3

XCL1-201, Transcript of X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCL1, Length 1,367 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCL1-201ENST00000367818 ITGB1P05556 798 aa4.89□□□□□ -1.63
XCL1-201ENST00000367818 CACNB3P54284 484 aa4.89□□□□□ -1.63
XCL1-201ENST00000367818 EPHA5P54756 1037 aa4.89□□□□□ -1.63
XCL1-201ENST00000367818 DBPQ10586 325 aaPredicted RBP4.89□□□□□ -1.63
XCL1-201ENST00000367818 SF1Q15637 639 aaKnown RBP4.89□□□□□ -1.63
XCL1-201ENST00000367818 ATP2B3Q16720 1220 aa4.89□□□□□ -1.63
XCL1-201ENST00000367818 CFAP100Q494V2 611 aa4.89□□□□□ -1.63
XCL1-201ENST00000367818 CAVIN1Q6NZI2 390 aaKnown RBP4.89□□□□□ -1.63
XCL1-201ENST00000367818 CXXC5Q7LFL8 322 aaKnown RBP4.89□□□□□ -1.63
XCL1-201ENST00000367818 ZNF227Q86WZ6 799 aa4.89□□□□□ -1.63
XCL1-201ENST00000367818 C9orf106Q8NAJ2 232 aa4.89□□□□□ -1.63
XCL1-201ENST00000367818 TMEM145Q8NBT3 493 aa4.89□□□□□ -1.63
XCL1-201ENST00000367818 BEND2Q8NDZ0 799 aa4.89□□□□□ -1.63
XCL1-201ENST00000367818 THAP3Q8WTV1 239 aaPredicted RBP4.89□□□□□ -1.63
XCL1-201ENST00000367818 C1orf159Q96HA4 380 aa4.89□□□□□ -1.63
XCL1-201ENST00000367818 PRMT6Q96LA8 375 aaPredicted RBP4.89□□□□□ -1.63
XCL1-201ENST00000367818 BICC1Q9H694 974 aaKnown RBP4.89□□□□□ -1.63
XCL1-201ENST00000367818 HDAC9Q9UKV0 1011 aa4.89□□□□□ -1.63
XCL1-201ENST00000367818 PSME4Q14997 1843 aa4.88□□□□□ -1.63
XCL1-201ENST00000367818 A0A1W2PRX2 142 aa4.88□□□□□ -1.63
XCL1-201ENST00000367818 VGLL3A8MV65 326 aa4.88□□□□□ -1.63
XCL1-201ENST00000367818 PPFIA4O75335 1185 aa4.88□□□□□ -1.63
XCL1-201ENST00000367818 NF2P35240 595 aa4.88□□□□□ -1.63
XCL1-201ENST00000367818 HDAC1Q13547 482 aaPredicted RBP4.88□□□□□ -1.63
XCL1-201ENST00000367818 MRPL58Q14197 206 aaKnown RBP4.88□□□□□ -1.63
XCL1-201ENST00000367818 RABL3Q5HYI8 236 aa4.88□□□□□ -1.63
XCL1-201ENST00000367818 METTL24Q5JXM2 366 aa4.88□□□□□ -1.63
XCL1-201ENST00000367818 KCTD1Q719H9 257 aa4.88□□□□□ -1.63
XCL1-201ENST00000367818 ZNF804AQ7Z570 1209 aa4.88□□□□□ -1.63
XCL1-201ENST00000367818 VPS37DQ86XT2 251 aa4.88□□□□□ -1.63
XCL1-201ENST00000367818 FAM184AQ8NB25 1140 aa4.88□□□□□ -1.63
XCL1-201ENST00000367818 SSH1Q8WYL5 1049 aa4.88□□□□□ -1.63
XCL1-201ENST00000367818 ANKRD7Q92527 254 aa4.88□□□□□ -1.63
XCL1-201ENST00000367818 KAZALD1Q96I82 304 aa4.88□□□□□ -1.63
XCL1-201ENST00000367818 CLMNQ96JQ2 1002 aa4.88□□□□□ -1.63
XCL1-201ENST00000367818 GPR87Q9BY21 358 aa4.88□□□□□ -1.63
XCL1-201ENST00000367818 SIL1Q9H173 461 aa4.88□□□□□ -1.63
XCL1-201ENST00000367818 TDRD3Q9H7E2 651 aaKnown RBP4.88□□□□□ -1.63
XCL1-201ENST00000367818 GINM1Q9NU53 330 aa4.88□□□□□ -1.63
XCL1-201ENST00000367818 LMBRD1Q9NUN5 540 aa4.88□□□□□ -1.63
XCL1-201ENST00000367818 TRPS1Q9UHF7 1281 aa4.88□□□□□ -1.63
XCL1-201ENST00000367818 CDC42EP3Q9UKI2 254 aa4.88□□□□□ -1.63
XCL1-201ENST00000367818 DDX19BQ9UMR2 479 aa4.88□□□□□ -1.63
XCL1-201ENST00000367818 HS3ST4Q9Y661 456 aa4.88□□□□□ -1.63
XCL1-201ENST00000367818 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.88□□□□□ -1.63
XCL1-201ENST00000367818 CACNA1FO60840 1977 aa4.87□□□□□ -1.63
XCL1-201ENST00000367818 PCNTO95613 3336 aa4.87□□□□□ -1.63
XCL1-201ENST00000367818 AK9Q5TCS8 1911 aa4.87□□□□□ -1.63
XCL1-201ENST00000367818 ALDH1L1O75891 902 aa4.87□□□□□ -1.63
XCL1-201ENST00000367818 GNAT1P11488 350 aa4.87□□□□□ -1.63
XCL1-201ENST00000367818 SPIRE1Q08AE8 756 aa4.87□□□□□ -1.63
XCL1-201ENST00000367818 MVPQ14764 893 aaKnown RBP4.87□□□□□ -1.63
XCL1-201ENST00000367818 ALDH1L2Q3SY69 923 aa4.87□□□□□ -1.63
XCL1-201ENST00000367818 MFSD14BQ5SR56 506 aa4.87□□□□□ -1.63
XCL1-201ENST00000367818 OTOP2Q7RTS6 562 aa4.87□□□□□ -1.63
XCL1-201ENST00000367818 ARMC9Q7Z3E5 817 aa4.87□□□□□ -1.63
XCL1-201ENST00000367818 ANKRD44Q8N8A2 993 aa4.87□□□□□ -1.63
XCL1-201ENST00000367818 SCARB1Q8WTV0 552 aa4.87□□□□□ -1.63
XCL1-201ENST00000367818 FAM84BQ96KN1 310 aaPredicted RBP4.87□□□□□ -1.63
XCL1-201ENST00000367818 DEFB129Q9H1M3 183 aa4.87□□□□□ -1.63
XCL1-201ENST00000367818 TSPY26PQ9H489 355 aa4.87□□□□□ -1.63
XCL1-201ENST00000367818 YY1AP1Q9H869 796 aa4.87□□□□□ -1.63
XCL1-201ENST00000367818 SMC4Q9NTJ3 1288 aa4.87□□□□□ -1.63
XCL1-201ENST00000367818 SPTLC3Q9NUV7 552 aa4.87□□□□□ -1.63
XCL1-201ENST00000367818 ARHGAP28Q9P2N2 729 aa4.87□□□□□ -1.63
XCL1-201ENST00000367818 DSEQ9UL01 958 aa4.87□□□□□ -1.63
XCL1-201ENST00000367818 NOB1Q9ULX3 412 aaKnown RBP4.87□□□□□ -1.63
XCL1-201ENST00000367818 TNNQ9UQP3 1299 aa4.87□□□□□ -1.63
XCL1-201ENST00000367818 MYO3BQ8WXR4 1341 aa4.86□□□□□ -1.63
XCL1-201ENST00000367818 A0A1B0GUL6 1792 aa4.86□□□□□ -1.63
XCL1-201ENST00000367818 THSD7BQ9C0I4 1608 aa4.86□□□□□ -1.63
XCL1-201ENST00000367818 GOLGA6L6A8MZA4 724 aa4.86□□□□□ -1.63
XCL1-201ENST00000367818 NKRFO15226 690 aaKnown RBP eCLIP4.86□□□□□ -1.63
XCL1-201ENST00000367818 CA12O43570 354 aa4.86□□□□□ -1.63
XCL1-201ENST00000367818 COL6A2P12110 1019 aa4.86□□□□□ -1.63
XCL1-201ENST00000367818 IL1R1P14778 569 aa4.86□□□□□ -1.63
XCL1-201ENST00000367818 SOX9P48436 509 aa4.86□□□□□ -1.63
XCL1-201ENST00000367818 RARSP54136 660 aaKnown RBP4.86□□□□□ -1.63
XCL1-201ENST00000367818 RASA3Q14644 834 aa4.86□□□□□ -1.63
XCL1-201ENST00000367818 NCAPHQ15003 741 aa4.86□□□□□ -1.63
XCL1-201ENST00000367818 RABEP1Q15276 862 aa4.86□□□□□ -1.63
XCL1-201ENST00000367818 HABP4Q5JVS0 413 aaKnown RBP4.86□□□□□ -1.63
XCL1-201ENST00000367818 SLC35F1Q5T1Q4 408 aa4.86□□□□□ -1.63
XCL1-201ENST00000367818 APOBEC3FQ8IUX4 373 aaKnown RBP4.86□□□□□ -1.63
XCL1-201ENST00000367818 TDRD7Q8NHU6 1098 aaKnown RBP4.86□□□□□ -1.63
XCL1-201ENST00000367818 TMEM39BQ9GZU3 492 aa4.86□□□□□ -1.63
XCL1-201ENST00000367818 USP44Q9H0E7 712 aa4.86□□□□□ -1.63
XCL1-201ENST00000367818 GPR27Q9NS67 375 aa4.86□□□□□ -1.63
XCL1-201ENST00000367818 ZNF70Q9UC06 446 aaPredicted RBP4.86□□□□□ -1.63
XCL1-201ENST00000367818 FAM184BQ9ULE4 1060 aa4.86□□□□□ -1.63
XCL1-201ENST00000367818 PA2G4Q9UQ80 394 aaKnown RBP4.86□□□□□ -1.63
XCL1-201ENST00000367818 FRMD4BQ9Y2L6 1034 aa4.86□□□□□ -1.63
XCL1-201ENST00000367818 RIPOR2Q9Y4F9 1068 aa4.86□□□□□ -1.63
XCL1-201ENST00000367818 ZNF646O15015 1829 aaPredicted RBP4.86□□□□□ -1.63
XCL1-201ENST00000367818 TULP2O00295 520 aa4.85□□□□□ -1.63
XCL1-201ENST00000367818 CTIFO43310 598 aaKnown RBP4.85□□□□□ -1.63
XCL1-201ENST00000367818 GRK2P25098 689 aa4.85□□□□□ -1.63
XCL1-201ENST00000367818 U2AF2P26368 475 aaKnown RBP eCLIP4.85□□□□□ -1.632e-6■■■■□ 26
XCL1-201ENST00000367818 GRK3P35626 688 aa4.85□□□□□ -1.63
XCL1-201ENST00000367818 TCP10Q12799 353 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms