RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 EXOC7Q9UPT5 735 aa11.26□□□□□ -0.61
YBX3-203ENST00000366286 USTQ9Y2C2 406 aa11.26□□□□□ -0.61
YBX3-203ENST00000366286 ZDHHC9Q9Y397 364 aa11.26□□□□□ -0.61
YBX3-203ENST00000366286 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.26□□□□□ -0.61
YBX3-203ENST00000366286 BACE2Q9Y5Z0 518 aa11.26□□□□□ -0.61
YBX3-203ENST00000366286 PPEF2O14830 753 aa11.25□□□□□ -0.61
YBX3-203ENST00000366286 POLR2DO15514 142 aaKnown RBP11.25□□□□□ -0.61
YBX3-203ENST00000366286 N4BP1O75113 896 aaKnown RBP11.25□□□□□ -0.61
YBX3-203ENST00000366286 PRPF6O94906 941 aaKnown RBP11.25□□□□□ -0.61
YBX3-203ENST00000366286 ASGR2P07307 311 aa11.25□□□□□ -0.61
YBX3-203ENST00000366286 ROR1Q01973 937 aa11.25□□□□□ -0.61
YBX3-203ENST00000366286 PPM1LQ5SGD2 360 aa11.25□□□□□ -0.61
YBX3-203ENST00000366286 SPATA1Q5VX52 437 aa11.25□□□□□ -0.61
YBX3-203ENST00000366286 CRELD2Q6UXH1 353 aaPredicted RBP11.25□□□□□ -0.61
YBX3-203ENST00000366286 OTOP3Q7RTS5 596 aa11.25□□□□□ -0.61
YBX3-203ENST00000366286 CD302Q8IX05 232 aa11.25□□□□□ -0.61
YBX3-203ENST00000366286 GLIS3Q8NEA6 775 aa11.25□□□□□ -0.61
YBX3-203ENST00000366286 ZSWIM2Q8NEG5 633 aa11.25□□□□□ -0.61
YBX3-203ENST00000366286 BEST2Q8NFU1 509 aa11.25□□□□□ -0.61
YBX3-203ENST00000366286 SLC7A14Q8TBB6 771 aa11.25□□□□□ -0.61
YBX3-203ENST00000366286 HPS3Q969F9 1004 aa11.25□□□□□ -0.61
YBX3-203ENST00000366286 ACSF2Q96CM8 615 aaPredicted RBP11.25□□□□□ -0.61
YBX3-203ENST00000366286 TSPAN18Q96SJ8 248 aa11.25□□□□□ -0.61
YBX3-203ENST00000366286 LRRC27Q9C0I9 530 aa11.25□□□□□ -0.61
YBX3-203ENST00000366286 MAGEF1Q9HAY2 307 aa11.25□□□□□ -0.61
YBX3-203ENST00000366286 PIDD1Q9HB75 910 aa11.25□□□□□ -0.61
YBX3-203ENST00000366286 FAM13BQ9NYF5 915 aa11.25□□□□□ -0.61
YBX3-203ENST00000366286 PCDHB8Q9UN66 801 aa11.25□□□□□ -0.61
YBX3-203ENST00000366286 DERAQ9Y315 318 aa11.25□□□□□ -0.61
YBX3-203ENST00000366286 PCDHB13Q9Y5F0 798 aa11.25□□□□□ -0.61
YBX3-203ENST00000366286 WDR27A2RRH5 827 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 TMEM221A6NGB7 291 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 H7C4K7 107 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 M0QZQ0 153 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 M0R296 226 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 CCL16O15467 120 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 TBC1D4O60343 1298 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 HNRNPA1P09651 372 aaKnown RBP eCLIP11.24□□□□□ -0.61
YBX3-203ENST00000366286 CASP1P29466 404 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 HOXA9P31269 272 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 AARSP49588 968 aaKnown RBP eCLIP11.24□□□□□ -0.61
YBX3-203ENST00000366286 WNT7BP56706 349 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 AMPD3Q01432 767 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 SIGLEC14Q08ET2 396 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 MTMR3Q13615 1198 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 MRPL58Q14197 206 aaKnown RBP11.24□□□□□ -0.61
YBX3-203ENST00000366286 POSTNQ15063 836 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 CTXN3Q4LDR2 81 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 SLC8B1Q6J4K2 584 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 ZNF280DQ6N043 979 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 CNNM4Q6P4Q7 775 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 TRIM67Q6ZTA4 783 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 HFE2Q6ZVN8 426 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 GET4Q7L5D6 327 aaPredicted RBP11.24□□□□□ -0.61
YBX3-203ENST00000366286 EFCAB13Q8IY85 973 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 SYCP3Q8IZU3 236 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 PLCD3Q8N3E9 789 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 APPL2Q8NEU8 664 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 SAAL1Q96ER3 474 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 C7orf25Q9BPX7 421 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 CBWD1Q9BRT8 395 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 FAM213AQ9BRX8 229 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 SMOC2Q9H3U7 446 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 ASB7Q9H672 318 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 LIMD1Q9UGP4 676 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 FBXL5Q9UKA1 691 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 RCOR1Q9UKL0 485 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 SORCS3Q9UPU3 1222 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 C2CD2Q9Y426 696 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 ZNF318Q5VUA4 2279 aa11.24□□□□□ -0.61
YBX3-203ENST00000366286 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.23□□□□□ -0.61
YBX3-203ENST00000366286 EIF3DO15371 548 aaKnown RBP eCLIP11.23□□□□□ -0.61
YBX3-203ENST00000366286 XYLBO75191 536 aa11.23□□□□□ -0.61
YBX3-203ENST00000366286 IL18RAPO95256 599 aa11.23□□□□□ -0.61
YBX3-203ENST00000366286 GARTP22102 1010 aa11.23□□□□□ -0.61
YBX3-203ENST00000366286 GBP2P32456 591 aaPredicted RBP11.23□□□□□ -0.61
YBX3-203ENST00000366286 AFMP43652 599 aa11.23□□□□□ -0.61
YBX3-203ENST00000366286 ARPP19P56211 112 aa11.23□□□□□ -0.61
YBX3-203ENST00000366286 KRT85P78386 507 aa11.23□□□□□ -0.61
YBX3-203ENST00000366286 POU5F1Q01860 360 aaKnown RBP11.23□□□□□ -0.61
YBX3-203ENST00000366286 FAM26FQ5R3K3 315 aa11.23□□□□□ -0.61
YBX3-203ENST00000366286 C9orf57Q5W0N0 161 aa11.23□□□□□ -0.61
YBX3-203ENST00000366286 ARMCX5Q6P1M9 558 aa11.23□□□□□ -0.61
YBX3-203ENST00000366286 STXBP4Q6ZWJ1 553 aa11.23□□□□□ -0.61
YBX3-203ENST00000366286 UNC13DQ70J99 1090 aa11.23□□□□□ -0.61
YBX3-203ENST00000366286 GRASPQ7Z6J2 395 aaPredicted RBP11.23□□□□□ -0.61
YBX3-203ENST00000366286 BRSK2Q8IWQ3 736 aa11.23□□□□□ -0.61
YBX3-203ENST00000366286 GRAMD1CQ8IYS0 662 aa11.23□□□□□ -0.61
YBX3-203ENST00000366286 ZNF461Q8TAF7 563 aa11.23□□□□□ -0.61
YBX3-203ENST00000366286 LEO1Q8WVC0 666 aaPredicted RBP11.23□□□□□ -0.61
YBX3-203ENST00000366286 ASIC4Q96FT7 647 aa11.23□□□□□ -0.61
YBX3-203ENST00000366286 SPATA32Q96LK8 384 aa11.23□□□□□ -0.61
YBX3-203ENST00000366286 MYADMQ96S97 322 aa11.23□□□□□ -0.61
YBX3-203ENST00000366286 BLZF1Q9H2G9 400 aa11.23□□□□□ -0.61
YBX3-203ENST00000366286 TMEM206Q9H813 350 aa11.23□□□□□ -0.61
YBX3-203ENST00000366286 KCNH3Q9ULD8 1083 aa11.23□□□□□ -0.61
YBX3-203ENST00000366286 POLIQ9UNA4 740 aa11.23□□□□□ -0.61
YBX3-203ENST00000366286 HCN4Q9Y3Q4 1203 aa11.23□□□□□ -0.61
YBX3-203ENST00000366286 TIMM13Q9Y5L4 95 aaPredicted RBP11.23□□□□□ -0.61
YBX3-203ENST00000366286 OBSL1O75147 1896 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms