RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 XRCC4Q13426 336 aa14.43□□□□□ -0.1
SGMS1-202ENST00000361781 BTNL9Q6UXG8 535 aa14.43□□□□□ -0.1
SGMS1-202ENST00000361781 SV2AQ7L0J3 742 aa14.43□□□□□ -0.1
SGMS1-202ENST00000361781 AGGF1Q8N302 714 aaeCLIP14.43□□□□□ -0.19e-7■■□□□ 13.8
SGMS1-202ENST00000361781 EPS8L1Q8TE68 723 aa14.43□□□□□ -0.1
SGMS1-202ENST00000361781 ATXN7L3BQ96GX2 97 aa14.43□□□□□ -0.1
SGMS1-202ENST00000361781 RBM41Q96IZ5 413 aaKnown RBP14.43□□□□□ -0.1
SGMS1-202ENST00000361781 RMDN2Q96LZ7 410 aa14.43□□□□□ -0.1
SGMS1-202ENST00000361781 RPS6KC1Q96S38 1066 aa14.43□□□□□ -0.1
SGMS1-202ENST00000361781 OLFML3Q9NRN5 406 aa14.43□□□□□ -0.1
SGMS1-202ENST00000361781 ARMCX1Q9P291 453 aa14.43□□□□□ -0.1
SGMS1-202ENST00000361781 ZBTB12Q9Y330 459 aaPredicted RBP14.43□□□□□ -0.1
SGMS1-202ENST00000361781 COL1A1P02452 1464 aaPredicted RBP14.43□□□□□ -0.1
SGMS1-202ENST00000361781 NOP56O00567 594 aaKnown RBP14.43□□□□□ -0.1
SGMS1-202ENST00000361781 KCNA3P22001 575 aa14.43□□□□□ -0.1
SGMS1-202ENST00000361781 SERPINB4P48594 390 aa14.43□□□□□ -0.1
SGMS1-202ENST00000361781 THOC5Q13769 683 aaKnown RBP14.43□□□□□ -0.1
SGMS1-202ENST00000361781 ACAD10Q6JQN1 1059 aa14.43□□□□□ -0.1
SGMS1-202ENST00000361781 RGS9BPQ6ZS82 235 aa14.43□□□□□ -0.1
SGMS1-202ENST00000361781 OTOP1Q7RTM1 612 aa14.43□□□□□ -0.1
SGMS1-202ENST00000361781 MCF2L2Q86YR7 1114 aa14.43□□□□□ -0.1
SGMS1-202ENST00000361781 FITM2Q8N6M3 262 aa14.43□□□□□ -0.1
SGMS1-202ENST00000361781 RBAKQ9NYW8 714 aaPredicted RBP14.43□□□□□ -0.1
SGMS1-202ENST00000361781 SLC4A7Q9Y6M7 1214 aa14.43□□□□□ -0.1
SGMS1-202ENST00000361781 KAT6AQ92794 2004 aa14.43□□□□□ -0.1
SGMS1-202ENST00000361781 DDX3YO15523 660 aaKnown RBP14.43□□□□□ -0.1
SGMS1-202ENST00000361781 ECE2O60344 883 aa14.43□□□□□ -0.1
SGMS1-202ENST00000361781 GRAP2O75791 330 aa14.43□□□□□ -0.1
SGMS1-202ENST00000361781 WEE2P0C1S8 567 aa14.43□□□□□ -0.1
SGMS1-202ENST00000361781 RFX1P22670 979 aa14.43□□□□□ -0.1
SGMS1-202ENST00000361781 COG7P83436 770 aa14.43□□□□□ -0.1
SGMS1-202ENST00000361781 OR6B2Q6IFH4 312 aa14.43□□□□□ -0.1
SGMS1-202ENST00000361781 SLC26A7Q8TE54 656 aa14.43□□□□□ -0.1
SGMS1-202ENST00000361781 TEKT4Q8WW24 435 aa14.43□□□□□ -0.1
SGMS1-202ENST00000361781 FAM81BQ96LP2 452 aa14.43□□□□□ -0.1
SGMS1-202ENST00000361781 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.43□□□□□ -0.11e-7■■■□□ 14.9
SGMS1-202ENST00000361781 FIS1Q9Y3D6 152 aa14.43□□□□□ -0.1
SGMS1-202ENST00000361781 SCINQ9Y6U3 715 aa14.43□□□□□ -0.1
SGMS1-202ENST00000361781 LOC100653049A0A140TA62 436 aa14.42□□□□□ -0.1
SGMS1-202ENST00000361781 KRT34O76011 436 aa14.42□□□□□ -0.1
SGMS1-202ENST00000361781 HLA-DRAP01903 254 aa14.42□□□□□ -0.1
SGMS1-202ENST00000361781 GCLCP48506 637 aaPredicted RBP14.42□□□□□ -0.1
SGMS1-202ENST00000361781 TEX2Q8IWB9 1127 aa14.42□□□□□ -0.1
SGMS1-202ENST00000361781 SLC25A41Q8N5S1 370 aa14.42□□□□□ -0.1
SGMS1-202ENST00000361781 C7orf31Q8N865 590 aa14.42□□□□□ -0.1
SGMS1-202ENST00000361781 ZSWIM2Q8NEG5 633 aa14.42□□□□□ -0.1
SGMS1-202ENST00000361781 MORC4Q8TE76 937 aa14.42□□□□□ -0.1
SGMS1-202ENST00000361781 C5P01031 1676 aa14.42□□□□□ -0.1
SGMS1-202ENST00000361781 GTPBP10A4D1E9 387 aaKnown RBP14.42□□□□□ -0.1
SGMS1-202ENST00000361781 CST8O60676 142 aa14.42□□□□□ -0.1
SGMS1-202ENST00000361781 UBAP2Q5T6F2 1119 aaKnown RBP14.42□□□□□ -0.1
SGMS1-202ENST00000361781 THEMIS2Q5TEJ8 643 aa14.42□□□□□ -0.1
SGMS1-202ENST00000361781 ATP11CQ8NB49 1132 aa14.42□□□□□ -0.1
SGMS1-202ENST00000361781 PPP4R1Q8TF05 950 aa14.42□□□□□ -0.1
SGMS1-202ENST00000361781 MAGEB18Q96M61 343 aa14.42□□□□□ -0.1
SGMS1-202ENST00000361781 ACAP3Q96P50 834 aa14.42□□□□□ -0.1
SGMS1-202ENST00000361781 PCDHB18PQ96TA0 734 aa14.42□□□□□ -0.1
SGMS1-202ENST00000361781 AGO2Q9UKV8 859 aaKnown RBP14.42□□□□□ -0.1
SGMS1-202ENST00000361781 ARFGEF2Q9Y6D5 1785 aa14.42□□□□□ -0.1
SGMS1-202ENST00000361781 IQANK1A0A1B0GTG1 560 aa14.42□□□□□ -0.1
SGMS1-202ENST00000361781 NFX1Q12986 1120 aaKnown RBP14.42□□□□□ -0.1
SGMS1-202ENST00000361781 TTLL12Q14166 644 aaPredicted RBP14.42□□□□□ -0.1
SGMS1-202ENST00000361781 SLC27A3Q5K4L6 730 aa14.42□□□□□ -0.1
SGMS1-202ENST00000361781 DCAF12L1Q5VU92 463 aa14.42□□□□□ -0.1
SGMS1-202ENST00000361781 ZNF572Q7Z3I7 529 aaPredicted RBP14.42□□□□□ -0.1
SGMS1-202ENST00000361781 TMEM35BQ8NCS4 154 aa14.42□□□□□ -0.1
SGMS1-202ENST00000361781 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.42□□□□□ -0.1
SGMS1-202ENST00000361781 KIAA1683Q9H0B3 1180 aa14.42□□□□□ -0.1
SGMS1-202ENST00000361781 CNOT7Q9UIV1 285 aaKnown RBP14.42□□□□□ -0.1
SGMS1-202ENST00000361781 DKC1O60832 514 aaKnown RBP eCLIP14.41□□□□□ -0.1
SGMS1-202ENST00000361781 STAMBPO95630 424 aa14.41□□□□□ -0.1
SGMS1-202ENST00000361781 PECAM1P16284 738 aaPredicted RBP14.41□□□□□ -0.1
SGMS1-202ENST00000361781 VCAM1P19320 739 aa14.41□□□□□ -0.1
SGMS1-202ENST00000361781 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.41□□□□□ -0.1
SGMS1-202ENST00000361781 ARID3BQ8IVW6 561 aaPredicted RBP14.41□□□□□ -0.1
SGMS1-202ENST00000361781 GPD1LQ8N335 351 aa14.41□□□□□ -0.1
SGMS1-202ENST00000361781 RBBP8NLQ8NC74 664 aaPredicted RBP14.41□□□□□ -0.1
SGMS1-202ENST00000361781 ATP2A3Q93084 1043 aa14.41□□□□□ -0.1
SGMS1-202ENST00000361781 NLRP4Q96MN2 994 aa14.41□□□□□ -0.1
SGMS1-202ENST00000361781 TTC25Q96NG3 672 aa14.41□□□□□ -0.1
SGMS1-202ENST00000361781 FERMT1Q9BQL6 677 aa14.41□□□□□ -0.1
SGMS1-202ENST00000361781 ZFATQ9P243 1243 aa14.41□□□□□ -0.1
SGMS1-202ENST00000361781 R3HDM2Q9Y2K5 976 aaKnown RBP14.41□□□□□ -0.1
SGMS1-202ENST00000361781 C21orf2O43822 256 aa14.41□□□□□ -0.1
SGMS1-202ENST00000361781 NUDT17P0C025 328 aa14.41□□□□□ -0.1
SGMS1-202ENST00000361781 ADRA1DP25100 572 aa14.41□□□□□ -0.1
SGMS1-202ENST00000361781 ARL1P40616 181 aaPredicted RBP14.41□□□□□ -0.1
SGMS1-202ENST00000361781 PSMC1P62191 440 aaKnown RBP14.41□□□□□ -0.1
SGMS1-202ENST00000361781 NR1H3Q13133 447 aa14.41□□□□□ -0.1
SGMS1-202ENST00000361781 COBLL1Q53SF7 1204 aa14.41□□□□□ -0.1
SGMS1-202ENST00000361781 C1orf186Q6ZWK4 172 aa14.41□□□□□ -0.1
SGMS1-202ENST00000361781 BZW1Q7L1Q6 419 aaKnown RBP14.41□□□□□ -0.1
SGMS1-202ENST00000361781 GSDMBQ8TAX9 411 aa14.41□□□□□ -0.1
SGMS1-202ENST00000361781 POLR3FQ9H1D9 316 aaPredicted RBP14.41□□□□□ -0.1
SGMS1-202ENST00000361781 PSMC3IPQ9P2W1 217 aaPredicted RBP14.41□□□□□ -0.1
SGMS1-202ENST00000361781 DNPEPQ9ULA0 475 aa14.41□□□□□ -0.1
SGMS1-202ENST00000361781 PCDHB2Q9Y5E7 798 aa14.41□□□□□ -0.1
SGMS1-202ENST00000361781 ZBED1O96006 694 aa14.41□□□□□ -0.1
SGMS1-202ENST00000361781 APRTP07741 180 aa14.41□□□□□ -0.1
SGMS1-202ENST00000361781 GNAT1P11488 350 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms