RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 RNF25Q96BH1 459 aaPredicted RBP6.38□□□□□ -1.39
VPS13B-203ENST00000358544 TMA16Q96EY4 203 aaKnown RBP6.38□□□□□ -1.39
VPS13B-203ENST00000358544 IP6K2Q9UHH9 426 aa6.38□□□□□ -1.39
VPS13B-203ENST00000358544 RTCBQ9Y3I0 505 aaKnown RBP6.38□□□□□ -1.39
VPS13B-203ENST00000358544 CDK12Q9NYV4 1490 aaPredicted RBP6.37□□□□□ -1.39
VPS13B-203ENST00000358544 LOC100653049A0A140TA62 436 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 KRT34O76011 436 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 DNAJC3Q13217 504 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 PTPAQ15257 358 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 DEPDC1Q5TB30 811 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 CLVS1Q8IUQ0 354 aaPredicted RBP6.37□□□□□ -1.39
VPS13B-203ENST00000358544 EXT2Q93063 718 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 NLRP3Q96P20 1036 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 MKNK1Q9BUB5 465 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 UVRAGQ9P2Y5 699 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 ASXL2Q76L83 1435 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 MEI4A8MW99 385 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 ANGPT2O15123 496 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 UNC5CO95185 931 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 SLC1A1P43005 524 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 CENPCQ03188 943 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 MCRS1Q96EZ8 462 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 ASPSCR1Q9BZE9 553 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 MYRFQ9Y2G1 1151 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 PDE8AO60658 829 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 CD58P19256 250 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 RAB27AP51159 221 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 TCIRG1Q13488 830 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 SLC45A4Q5BKX6 768 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 CYP26B1Q9NR63 512 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 NIP7Q9Y221 180 aaKnown RBP eCLIP6.37□□□□□ -1.39
VPS13B-203ENST00000358544 CDY2AQ9Y6F7 541 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 CDY1Q9Y6F8 540 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 POTEMA6NI47 508 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 BRDTQ58F21 947 aaPredicted RBP6.37□□□□□ -1.39
VPS13B-203ENST00000358544 DRAXINQ8NBI3 349 aaPredicted RBP6.37□□□□□ -1.39
VPS13B-203ENST00000358544 ATP6V1E2Q96A05 226 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 DGCR14Q96DF8 476 aaKnown RBP6.37□□□□□ -1.39
VPS13B-203ENST00000358544 WDR37Q9Y2I8 494 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 HLA-DPA1P20036 260 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 KLRC1P26715 233 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 GEMIN4P57678 1058 aaKnown RBP6.37□□□□□ -1.39
VPS13B-203ENST00000358544 ITGA9Q13797 1035 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 CTTNQ14247 550 aaKnown RBP6.37□□□□□ -1.39
VPS13B-203ENST00000358544 RNF43Q68DV7 783 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 SH3TC2Q8TF17 1288 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 C1orf50Q9BV19 199 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 GUCY1A2P33402 732 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 ARHGAP27Q6ZUM4 889 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 TTC8Q8TAM2 541 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 ACTRT1Q8TDG2 376 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 COPG1Q9Y678 874 aaKnown RBP6.37□□□□□ -1.39
VPS13B-203ENST00000358544 CDH2P19022 906 aaPredicted RBP6.37□□□□□ -1.39
VPS13B-203ENST00000358544 PDK3Q15120 406 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 FASTKD1Q53R41 847 aaKnown RBP6.37□□□□□ -1.39
VPS13B-203ENST00000358544 MEI1Q5TIA1 1274 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 TRIM69Q86WT6 500 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 DNAAF2Q9NVR5 837 aaKnown RBP6.37□□□□□ -1.39
VPS13B-203ENST00000358544 CLIC5Q9NZA1 410 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 PFDN6O15212 129 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 A1BGP04217 495 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 LIG4P49917 911 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 RAB14P61106 215 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 PFKFB3Q16875 520 aaPredicted RBP6.37□□□□□ -1.39
VPS13B-203ENST00000358544 TCAIMQ8N3R3 496 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 RBM46Q8TBY0 533 aaKnown RBP6.37□□□□□ -1.39
VPS13B-203ENST00000358544 DHX38Q92620 1227 aaKnown RBP6.37□□□□□ -1.39
VPS13B-203ENST00000358544 DDX56Q9NY93 547 aaKnown RBP6.37□□□□□ -1.39
VPS13B-203ENST00000358544 DUSP10Q9Y6W6 482 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 SMAPO00193 183 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 FCGR1AP12314 374 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 GYS1P13807 737 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 TXNRD1Q16881 649 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 KNOP1Q1ED39 458 aaKnown RBP6.37□□□□□ -1.39
VPS13B-203ENST00000358544 TMEM63BQ5T3F8 832 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 RNF220Q5VTB9 566 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 CCDC60Q8IWA6 550 aaPredicted RBP6.37□□□□□ -1.39
VPS13B-203ENST00000358544 RCOR2Q8IZ40 523 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 QKIQ96PU8 341 aaKnown RBP eCLIP6.37□□□□□ -1.394e-7■■■■□ 24.9
VPS13B-203ENST00000358544 DEPDC7Q96QD5 511 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 HBS1LQ9Y450 684 aaKnown RBP6.37□□□□□ -1.39
VPS13B-203ENST00000358544 ABCC10Q5T3U5 1492 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 WDR17Q8IZU2 1322 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 TTC37Q6PGP7 1564 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 PCCAP05165 728 aaPredicted RBP6.37□□□□□ -1.39
VPS13B-203ENST00000358544 TCN1P20061 433 aaPredicted RBP6.37□□□□□ -1.39
VPS13B-203ENST00000358544 ATXN3P54252 364 aaPredicted RBP6.37□□□□□ -1.39
VPS13B-203ENST00000358544 RUNX1T1Q06455 604 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 SPDYCQ5MJ68 293 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 ANKMY2Q8IV38 441 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 KYQ8NBH2 561 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 HPS3Q969F9 1004 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 ZNF496Q96IT1 587 aaPredicted RBP6.37□□□□□ -1.39
VPS13B-203ENST00000358544 C11orf70Q9BRQ4 267 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 KDM6BO15054 1643 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 DNALI1O14645 258 aaPredicted RBP6.37□□□□□ -1.39
VPS13B-203ENST00000358544 PYGLP06737 847 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 ALADP13716 330 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 COMTP21964 271 aa6.37□□□□□ -1.39
VPS13B-203ENST00000358544 NEDD8Q15843 81 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms