RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 HASPINQ8TF76 798 aa16.04■□□□□ 0.16
CCNE1-202ENST00000357943 ELMO3Q96BJ8 720 aa16.04■□□□□ 0.16
CCNE1-202ENST00000357943 UROC1Q96N76 676 aa16.04■□□□□ 0.16
CCNE1-202ENST00000357943 TMEM175Q9BSA9 504 aa16.04■□□□□ 0.16
CCNE1-202ENST00000357943 NDST4Q9H3R1 872 aa16.04■□□□□ 0.16
CCNE1-202ENST00000357943 AGAP1Q9UPQ3 857 aa16.04■□□□□ 0.16
CCNE1-202ENST00000357943 FAN1Q9Y2M0 1017 aa16.04■□□□□ 0.16
CCNE1-202ENST00000357943 PES1O00541 588 aaKnown RBP16.03■□□□□ 0.16
CCNE1-202ENST00000357943 PHACTR2O75167 634 aa16.03■□□□□ 0.16
CCNE1-202ENST00000357943 B3GAT3O94766 335 aa16.03■□□□□ 0.16
CCNE1-202ENST00000357943 KIF4AO95239 1232 aa16.03■□□□□ 0.16
CCNE1-202ENST00000357943 LAG3P18627 525 aa16.03■□□□□ 0.16
CCNE1-202ENST00000357943 DNAJB2P25686 324 aa16.03■□□□□ 0.16
CCNE1-202ENST00000357943 RPL9P32969 192 aaKnown RBP16.03■□□□□ 0.16
CCNE1-202ENST00000357943 COPB1P53618 953 aaKnown RBP16.03■□□□□ 0.16
CCNE1-202ENST00000357943 CD300LGQ6UXG3 332 aa16.03■□□□□ 0.16
CCNE1-202ENST00000357943 COLGALT1Q8NBJ5 622 aa16.03■□□□□ 0.16
CCNE1-202ENST00000357943 ANKRD20A12PQ8NF67 263 aa16.03■□□□□ 0.16
CCNE1-202ENST00000357943 DDX27Q96GQ7 796 aaKnown RBP16.03■□□□□ 0.16
CCNE1-202ENST00000357943 C17orf80Q9BSJ5 609 aa16.03■□□□□ 0.16
CCNE1-202ENST00000357943 NKX2-4Q9H2Z4 354 aa16.03■□□□□ 0.16
CCNE1-202ENST00000357943 MARCH5Q9NX47 278 aa16.03■□□□□ 0.16
CCNE1-202ENST00000357943 MSRAQ9UJ68 235 aa16.03■□□□□ 0.16
CCNE1-202ENST00000357943 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.03■□□□□ 0.16
CCNE1-202ENST00000357943 FSD2A1L4K1 749 aa16.02■□□□□ 0.16
CCNE1-202ENST00000357943 RBP5P82980 135 aa16.02■□□□□ 0.16
CCNE1-202ENST00000357943 SMAD3P84022 425 aaKnown RBP16.02■□□□□ 0.16
CCNE1-202ENST00000357943 MYL7Q01449 175 aa16.02■□□□□ 0.16
CCNE1-202ENST00000357943 TAP1Q03518 808 aa16.02■□□□□ 0.16
CCNE1-202ENST00000357943 NCOA4Q13772 614 aa16.02■□□□□ 0.16
CCNE1-202ENST00000357943 RAB30Q15771 203 aa16.02■□□□□ 0.16
CCNE1-202ENST00000357943 LRIT3Q3SXY7 679 aa16.02■□□□□ 0.16
CCNE1-202ENST00000357943 BCL7CQ8WUZ0 217 aaPredicted RBP16.02■□□□□ 0.16
CCNE1-202ENST00000357943 SEMA4DQ92854 862 aa16.02■□□□□ 0.16
CCNE1-202ENST00000357943 ZNF558Q96NG5 402 aa16.02■□□□□ 0.16
CCNE1-202ENST00000357943 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.02■□□□□ 0.16
CCNE1-202ENST00000357943 MTUS1Q9ULD2 1270 aa16.02■□□□□ 0.16
CCNE1-202ENST00000357943 GBF1Q92538 1859 aa16.02■□□□□ 0.15
CCNE1-202ENST00000357943 SPTLC1O15269 473 aa16.01■□□□□ 0.15
CCNE1-202ENST00000357943 PMM2O15305 246 aa16.01■□□□□ 0.15
CCNE1-202ENST00000357943 HLA-DRAP01903 254 aa16.01■□□□□ 0.15
CCNE1-202ENST00000357943 PIK3CAP42336 1068 aa16.01■□□□□ 0.15
CCNE1-202ENST00000357943 MYL6P60660 151 aa16.01■□□□□ 0.15
CCNE1-202ENST00000357943 FANCCQ00597 558 aa16.01■□□□□ 0.15
CCNE1-202ENST00000357943 TRPC3Q13507 836 aa16.01■□□□□ 0.15
CCNE1-202ENST00000357943 DCLRE1AQ6PJP8 1040 aa16.01■□□□□ 0.15
CCNE1-202ENST00000357943 FBXL13Q8NEE6 735 aa16.01■□□□□ 0.15
CCNE1-202ENST00000357943 NAP1L5Q96NT1 182 aaPredicted RBP16.01■□□□□ 0.15
CCNE1-202ENST00000357943 PI4K2AQ9BTU6 479 aa16.01■□□□□ 0.15
CCNE1-202ENST00000357943 XYLT2Q9H1B5 865 aa16.01■□□□□ 0.15
CCNE1-202ENST00000357943 RAB20Q9NX57 234 aa16.01■□□□□ 0.15
CCNE1-202ENST00000357943 COQ4Q9Y3A0 265 aa16.01■□□□□ 0.15
CCNE1-202ENST00000357943 R3HCC1Q9Y3T6 440 aaKnown RBP16.01■□□□□ 0.15
CCNE1-202ENST00000357943 P4HA2O15460 535 aa16.01■□□□□ 0.15
CCNE1-202ENST00000357943 N4BP1O75113 896 aaKnown RBP16.01■□□□□ 0.15
CCNE1-202ENST00000357943 SERPINC1P01008 464 aa16.01■□□□□ 0.15
CCNE1-202ENST00000357943 TPM2P07951 284 aa16.01■□□□□ 0.15
CCNE1-202ENST00000357943 BMPR1AP36894 532 aa16.01■□□□□ 0.15
CCNE1-202ENST00000357943 LILRA4P59901 499 aa16.01■□□□□ 0.15
CCNE1-202ENST00000357943 EPC2Q52LR7 807 aa16.01■□□□□ 0.15
CCNE1-202ENST00000357943 PPP2R2DQ66LE6 453 aa16.01■□□□□ 0.15
CCNE1-202ENST00000357943 SLC39A11Q8N1S5 342 aa16.01■□□□□ 0.15
CCNE1-202ENST00000357943 LRRC52Q8N7C0 313 aa16.01■□□□□ 0.15
CCNE1-202ENST00000357943 TIFAQ96CG3 184 aa16.01■□□□□ 0.15
CCNE1-202ENST00000357943 IGSF21Q96ID5 467 aa16.01■□□□□ 0.15
CCNE1-202ENST00000357943 HPDLQ96IR7 371 aa16.01■□□□□ 0.15
CCNE1-202ENST00000357943 CRACR2AQ9BSW2 395 aa16.01■□□□□ 0.15
CCNE1-202ENST00000357943 COLEC11Q9BWP8 271 aa16.01■□□□□ 0.15
CCNE1-202ENST00000357943 SLC28A3Q9HAS3 691 aa16.01■□□□□ 0.15
CCNE1-202ENST00000357943 AAASQ9NRG9 546 aa16.01■□□□□ 0.15
CCNE1-202ENST00000357943 ADAM28Q9UKQ2 775 aa16.01■□□□□ 0.15
CCNE1-202ENST00000357943 NUB1Q9Y5A7 615 aa16.01■□□□□ 0.15
CCNE1-202ENST00000357943 PCDHB12Q9Y5F1 795 aa16.01■□□□□ 0.15
CCNE1-202ENST00000357943 TRIOBPQ9H2D6 2365 aa16■□□□□ 0.15
CCNE1-202ENST00000357943 TMEM189-UBE2V1I3L0A0 370 aa16■□□□□ 0.15
CCNE1-202ENST00000357943 I3L4J1 428 aa16■□□□□ 0.15
CCNE1-202ENST00000357943 TADA2AO75478 443 aa16■□□□□ 0.15
CCNE1-202ENST00000357943 CTNNB1P35222 781 aa16■□□□□ 0.15
CCNE1-202ENST00000357943 BRCC3P46736 316 aa16■□□□□ 0.15
CCNE1-202ENST00000357943 TAF6P49848 677 aa16■□□□□ 0.15
CCNE1-202ENST00000357943 SPOPLQ6IQ16 392 aa16■□□□□ 0.15
CCNE1-202ENST00000357943 KLHL23Q8NBE8 558 aa16■□□□□ 0.15
CCNE1-202ENST00000357943 LMO3Q8TAP4 145 aa16■□□□□ 0.15
CCNE1-202ENST00000357943 ZNF560Q96MR9 790 aa16■□□□□ 0.15
CCNE1-202ENST00000357943 TGS1Q96RS0 853 aaKnown RBP16■□□□□ 0.15
CCNE1-202ENST00000357943 CERS4Q9HA82 394 aa16■□□□□ 0.15
CCNE1-202ENST00000357943 A0A1B0GTH6 734 aa15.99■□□□□ 0.15
CCNE1-202ENST00000357943 GOLGA6L3A6NEY3 463 aa15.99■□□□□ 0.15
CCNE1-202ENST00000357943 LGALS16A8MUM7 142 aa15.99■□□□□ 0.15
CCNE1-202ENST00000357943 TEX33O43247 280 aa15.99■□□□□ 0.15
CCNE1-202ENST00000357943 ASS1P00966 412 aaKnown RBP15.99■□□□□ 0.15
CCNE1-202ENST00000357943 PNPLA4P41247 253 aa15.99■□□□□ 0.15
CCNE1-202ENST00000357943 AARSP49588 968 aaKnown RBP eCLIP15.99■□□□□ 0.15
CCNE1-202ENST00000357943 ERVK-21P61565 698 aa15.99■□□□□ 0.15
CCNE1-202ENST00000357943 CETN1Q12798 172 aa15.99■□□□□ 0.15
CCNE1-202ENST00000357943 PTPN21Q16825 1174 aa15.99■□□□□ 0.15
CCNE1-202ENST00000357943 ZNF699Q32M78 642 aa15.99■□□□□ 0.15
CCNE1-202ENST00000357943 TIGD5Q53EQ6 642 aa15.99■□□□□ 0.15
CCNE1-202ENST00000357943 GPR62Q9BZJ7 368 aa15.99■□□□□ 0.15
CCNE1-202ENST00000357943 APOBEC3GQ9HC16 384 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms