RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 PRPF39Q86UA1 669 aaKnown RBP11.05□□□□□ -0.64
FXR1-202ENST00000357559 PRPF18Q99633 342 aaKnown RBP11.05□□□□□ -0.64
FXR1-202ENST00000357559 SCUBE2Q9NQ36 999 aa11.05□□□□□ -0.64
FXR1-202ENST00000357559 ZBTB1Q9Y2K1 713 aa11.05□□□□□ -0.64
FXR1-202ENST00000357559 CYP26A1O43174 497 aa11.05□□□□□ -0.64
FXR1-202ENST00000357559 SRP72O76094 671 aaKnown RBP11.05□□□□□ -0.64
FXR1-202ENST00000357559 DYNC1I2Q13409 638 aaKnown RBP11.05□□□□□ -0.64
FXR1-202ENST00000357559 CAPRIN2Q6IMN6 1127 aaKnown RBP11.05□□□□□ -0.64
FXR1-202ENST00000357559 PPP4R3CPQ6ZMV5 832 aa11.05□□□□□ -0.64
FXR1-202ENST00000357559 GOLPH3LQ9H4A5 285 aa11.05□□□□□ -0.64
FXR1-202ENST00000357559 SPATA2Q9UM82 520 aa11.05□□□□□ -0.64
FXR1-202ENST00000357559 HOXD10P28358 340 aa11.05□□□□□ -0.64
FXR1-202ENST00000357559 GAS2L3Q86XJ1 694 aa11.05□□□□□ -0.64
FXR1-202ENST00000357559 LSM7Q9UK45 103 aaKnown RBP11.05□□□□□ -0.64
FXR1-202ENST00000357559 SNX8Q9Y5X2 465 aa11.05□□□□□ -0.64
FXR1-202ENST00000357559 TRIM13O60858 407 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 TBXAS1P24557 533 aaPredicted RBP11.04□□□□□ -0.64
FXR1-202ENST00000357559 ACOT2P49753 483 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 ABCE1P61221 599 aaKnown RBP11.04□□□□□ -0.64
FXR1-202ENST00000357559 PSMC6P62333 389 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 TP53BP2Q13625 1128 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 CNGA2Q16280 664 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 C4orf33Q8N1A6 199 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 SLC7A14Q8TBB6 771 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 GLMNQ92990 594 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 DHX36Q9H2U1 1008 aaKnown RBP11.04□□□□□ -0.64
FXR1-202ENST00000357559 OR1G1P47890 313 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 TADA1Q96BN2 335 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 IMPAD1Q9NX62 359 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 DDX56Q9NY93 547 aaKnown RBP11.04□□□□□ -0.64
FXR1-202ENST00000357559 UHRF1BP1Q6BDS2 1440 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 CCDC22O60826 627 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 PTPN7P35236 360 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 CPA2P48052 419 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 TLK2Q86UE8 772 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 RAD54LQ92698 747 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 EXOC4Q96A65 974 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 CNDP1Q96KN2 507 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 DIABLOQ9NR28 239 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 OLFML3Q9NRN5 406 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 RNF14Q9UBS8 474 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 POU1F1P28069 291 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 SERPINB1P30740 379 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 RNF149Q8NC42 400 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 LINC00301Q8NCQ3 95 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 HOXC10Q9NYD6 342 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 RNF181Q9P0P0 153 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 KCNH4Q9UQ05 1017 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 DIS3Q9Y2L1 958 aaKnown RBP11.04□□□□□ -0.64
FXR1-202ENST00000357559 ECE2O60344 883 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 MYBL1P10243 752 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 KCNA3P22001 575 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 GUCY1A2P33402 732 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 TMED10P49755 219 aaKnown RBP11.04□□□□□ -0.64
FXR1-202ENST00000357559 ACTR2P61160 394 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 SLC44A5Q8NCS7 719 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 TRIM62Q9BVG3 475 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 AMACRQ9UHK6 382 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 PRR12Q9ULL5 1215 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.04□□□□□ -0.64
FXR1-202ENST00000357559 RARBP10826 455 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 HDHD2Q9H0R4 259 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 RAB6BQ9NRW1 208 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 PCDHB7Q9Y5E2 793 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 NEDD4P46934 1319 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 ZMYM3Q14202 1370 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.04□□□□□ -0.64
FXR1-202ENST00000357559 PP2D1A8MPX8 630 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 F8W810 466 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 TPST1O60507 370 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 HOXB7P09629 217 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 HPGDP15428 266 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 MAGEA9P43362 315 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 OOSP2Q86WS3 158 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 NMRK2Q9NPI5 230 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 AGO2Q9UKV8 859 aaKnown RBP11.04□□□□□ -0.64
FXR1-202ENST00000357559 ITIH6Q6UXX5 1313 aa11.04□□□□□ -0.64
FXR1-202ENST00000357559 PRPF3O43395 683 aaKnown RBP11.03□□□□□ -0.64
FXR1-202ENST00000357559 GPR1P46091 355 aa11.03□□□□□ -0.64
FXR1-202ENST00000357559 PLCL1Q15111 1095 aa11.03□□□□□ -0.64
FXR1-202ENST00000357559 EXD1Q8NHP7 514 aa11.03□□□□□ -0.64
FXR1-202ENST00000357559 FEM1BQ9UK73 627 aa11.03□□□□□ -0.64
FXR1-202ENST00000357559 SLC30A1Q9Y6M5 507 aa11.03□□□□□ -0.64
FXR1-202ENST00000357559 A0A087X0T9 212 aa11.03□□□□□ -0.64
FXR1-202ENST00000357559 ALOX15P16050 662 aaPredicted RBP11.03□□□□□ -0.64
FXR1-202ENST00000357559 ST13P50502 369 aaKnown RBP11.03□□□□□ -0.64
FXR1-202ENST00000357559 CAV1Q03135 178 aa11.03□□□□□ -0.64
FXR1-202ENST00000357559 HPS3Q969F9 1004 aa11.03□□□□□ -0.64
FXR1-202ENST00000357559 OSBP2Q969R2 916 aa11.03□□□□□ -0.64
FXR1-202ENST00000357559 ACSF2Q96CM8 615 aaPredicted RBP11.03□□□□□ -0.64
FXR1-202ENST00000357559 TRABDQ9H4I3 376 aa11.03□□□□□ -0.64
FXR1-202ENST00000357559 SCN3BQ9NY72 215 aa11.03□□□□□ -0.64
FXR1-202ENST00000357559 BLMP54132 1417 aaPredicted RBP11.03□□□□□ -0.64
FXR1-202ENST00000357559 HSPA9P38646 679 aaKnown RBP11.03□□□□□ -0.64
FXR1-202ENST00000357559 TTLL6Q8N841 843 aa11.03□□□□□ -0.64
FXR1-202ENST00000357559 TMEM143Q96AN5 459 aa11.03□□□□□ -0.64
FXR1-202ENST00000357559 FAM96AQ9H5X1 160 aa11.03□□□□□ -0.64
FXR1-202ENST00000357559 RPS6KB2Q9UBS0 482 aa11.03□□□□□ -0.64
FXR1-202ENST00000357559 AATKQ6ZMQ8 1374 aa11.03□□□□□ -0.64
FXR1-202ENST00000357559 C3orf70A6NLC5 250 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms