RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 RTKN2Q8IZC4 609 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 RASGEF1CQ8N431 466 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 ATL2Q8NHH9 583 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 CHURC1Q8WUH1 139 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 ZFAND2BQ8WV99 257 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 C7orf43Q8WVR3 580 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 ATXN2LQ8WWM7 1075 aaKnown RBP9.95□□□□□ -0.82
SMG6-202ENST00000354901 ADAM33Q9BZ11 813 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 COL20A1Q9P218 1284 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 STK24Q9Y6E0 443 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 TCRBV7S2A1N4TA0A589 114 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 ANKRD62A6NC57 917 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 PIK3CDO00329 1044 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 CES2O00748 559 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 SPOPO43791 374 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 SERPINB3P29508 390 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 STX2P32856 288 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 PPATQ06203 517 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 SETDB1Q15047 1291 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 LONRF1Q17RB8 773 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 PIGWQ7Z7B1 504 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 JAMLQ86YT9 394 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 CEP70Q8NHQ1 597 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 NEK9Q8TD19 979 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 MKNK1Q9BUB5 465 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 ATXN10Q9UBB4 475 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 TMX2Q9Y320 296 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 ASB3Q9Y575 518 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 ZHX2Q9Y6X8 837 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 ACSL3O95573 720 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 GH1P01241 217 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 SKIP12755 728 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 ALADP13716 330 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 COMTP21964 271 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 CETN1Q12798 172 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 DLGAP5Q15398 846 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 LRRC36Q1X8D7 754 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 FAM102BQ5T8I3 360 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 SLC47A2Q86VL8 602 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 LCA5Q86VQ0 697 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 CBWD2Q8IUF1 395 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 FAM13CQ8NE31 585 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 TOPORSQ9NS56 1045 aaPredicted RBP9.95□□□□□ -0.82
SMG6-202ENST00000354901 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.95□□□□□ -0.82
SMG6-202ENST00000354901 USP20Q9Y2K6 914 aa9.95□□□□□ -0.82
SMG6-202ENST00000354901 SRRM3A6NNA2 597 aaPredicted RBP9.94□□□□□ -0.82
SMG6-202ENST00000354901 ENTPD3O75355 529 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 PAEPP09466 180 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 MXI1P50539 228 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 BNIP1Q12981 228 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 HAUS6Q7Z4H7 955 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 CCDC105Q8IYK2 499 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 PLEKHO2Q8TD55 490 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 ATP8B4Q8TF62 1192 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 SCG3Q8WXD2 468 aaKnown RBP9.94□□□□□ -0.82
SMG6-202ENST00000354901 DHX38Q92620 1227 aaKnown RBP9.94□□□□□ -0.82
SMG6-202ENST00000354901 PCDHB18PQ96TA0 734 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 ERP44Q9BS26 406 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 EHMT1Q9H9B1 1298 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 DMAC2Q9NW81 257 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 CYP39A1Q9NYL5 469 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 HSPBP1Q9NZL4 362 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 SEL1LQ9UBV2 794 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 ARL2BPQ9Y2Y0 163 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 SIPA1L1O43166 1804 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.94□□□□□ -0.82
SMG6-202ENST00000354901 A6NJR5 290 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 BAG2O95816 211 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 VIL1P09327 827 aaKnown RBP9.94□□□□□ -0.82
SMG6-202ENST00000354901 DLATP10515 647 aaKnown RBP9.94□□□□□ -0.82
SMG6-202ENST00000354901 SSTR3P32745 418 aaPredicted RBP9.94□□□□□ -0.82
SMG6-202ENST00000354901 INHBCP55103 352 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 PTENP60484 403 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 CNPY1Q3B7I2 92 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 EMC10Q5UCC4 262 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 SNX30Q5VWJ9 437 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 ARHGAP18Q8N392 663 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 PPFIBP2Q8ND30 876 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 DTNBP1Q96EV8 351 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 CLMNQ96JQ2 1002 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 TGS1Q96RS0 853 aaKnown RBP9.94□□□□□ -0.82
SMG6-202ENST00000354901 RAVER2Q9HCJ3 691 aaKnown RBP9.94□□□□□ -0.82
SMG6-202ENST00000354901 ARHGEF3Q9NR81 526 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 TDRKHQ9Y2W6 561 aaKnown RBP9.94□□□□□ -0.82
SMG6-202ENST00000354901 TMEM120BA0PK00 339 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 MAGEB3O15480 346 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 KRT36O76013 467 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 VPS41P49754 854 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 PMS2P54278 862 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 TRIP13Q15645 432 aaPredicted RBP9.94□□□□□ -0.82
SMG6-202ENST00000354901 XKR9Q5GH70 373 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 NOP9Q86U38 636 aaKnown RBP9.94□□□□□ -0.82
SMG6-202ENST00000354901 OGFOD1Q8N543 542 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 UTP4Q969X6 686 aaKnown RBP9.94□□□□□ -0.82
SMG6-202ENST00000354901 MXRA8Q9BRK3 442 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 ZNF341Q9BYN7 854 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 SEMA4AQ9H3S1 761 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 DDX18Q9NVP1 670 aaKnown RBP9.94□□□□□ -0.82
SMG6-202ENST00000354901 CTNNAL1Q9UBT7 734 aa9.94□□□□□ -0.82
SMG6-202ENST00000354901 GREB1LQ9C091 1923 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms