RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 LRRC4CQ9HCJ2 640 aa14.81□□□□□ -0.04
TRIM4-201ENST00000349062 STXBP5LQ9Y2K9 1186 aa14.81□□□□□ -0.04
TRIM4-201ENST00000349062 ATP2A1O14983 1001 aa14.81□□□□□ -0.04
TRIM4-201ENST00000349062 ARL2P36404 184 aa14.81□□□□□ -0.04
TRIM4-201ENST00000349062 IFT88Q13099 833 aa14.81□□□□□ -0.04
TRIM4-201ENST00000349062 SH3D19Q5HYK7 790 aa14.81□□□□□ -0.04
TRIM4-201ENST00000349062 CELF3Q5SZQ8 465 aaKnown RBP14.81□□□□□ -0.04
TRIM4-201ENST00000349062 ACAD10Q6JQN1 1059 aa14.81□□□□□ -0.04
TRIM4-201ENST00000349062 SESTD1Q86VW0 696 aa14.81□□□□□ -0.04
TRIM4-201ENST00000349062 ATP8B4Q8TF62 1192 aa14.81□□□□□ -0.04
TRIM4-201ENST00000349062 SPDYE5A6NIY4 337 aa14.81□□□□□ -0.04
TRIM4-201ENST00000349062 KRT10P13645 584 aa14.81□□□□□ -0.04
TRIM4-201ENST00000349062 RPL7AP62424 266 aaKnown RBP14.81□□□□□ -0.04
TRIM4-201ENST00000349062 TTLL4Q14679 1199 aa14.81□□□□□ -0.04
TRIM4-201ENST00000349062 GLRA4Q5JXX5 417 aa14.81□□□□□ -0.04
TRIM4-201ENST00000349062 UBAP2Q5T6F2 1119 aaKnown RBP14.81□□□□□ -0.04
TRIM4-201ENST00000349062 SLFN12LQ6IEE8 588 aa14.81□□□□□ -0.04
TRIM4-201ENST00000349062 ISCUQ9H1K1 167 aa14.81□□□□□ -0.04
TRIM4-201ENST00000349062 GDF3Q9NR23 364 aa14.81□□□□□ -0.04
TRIM4-201ENST00000349062 A0A0B4J269 797 aa14.8□□□□□ -0.04
TRIM4-201ENST00000349062 C4BPAP04003 597 aaKnown RBP14.8□□□□□ -0.04
TRIM4-201ENST00000349062 HSD17B3P37058 310 aa14.8□□□□□ -0.04
TRIM4-201ENST00000349062 AARSP49588 968 aaKnown RBP eCLIP14.8□□□□□ -0.04
TRIM4-201ENST00000349062 KIZQ2M2Z5 673 aa14.8□□□□□ -0.04
TRIM4-201ENST00000349062 SMTNL2Q2TAL5 461 aa14.8□□□□□ -0.04
TRIM4-201ENST00000349062 ZNF699Q32M78 642 aa14.8□□□□□ -0.04
TRIM4-201ENST00000349062 SGO2Q562F6 1265 aa14.8□□□□□ -0.04
TRIM4-201ENST00000349062 ATF7IP2Q5U623 682 aa14.8□□□□□ -0.04
TRIM4-201ENST00000349062 GSTA5Q7RTV2 222 aa14.8□□□□□ -0.04
TRIM4-201ENST00000349062 ZDHHC14Q8IZN3 488 aa14.8□□□□□ -0.04
TRIM4-201ENST00000349062 FBXO25Q8TCJ0 367 aa14.8□□□□□ -0.04
TRIM4-201ENST00000349062 C10orf88Q9H8K7 445 aa14.8□□□□□ -0.04
TRIM4-201ENST00000349062 HES2Q9Y543 173 aa14.8□□□□□ -0.04
TRIM4-201ENST00000349062 A0A0A6YYK5 440 aaPredicted RBP14.8□□□□□ -0.04
TRIM4-201ENST00000349062 EIF3HO15372 352 aaKnown RBP eCLIP14.8□□□□□ -0.04
TRIM4-201ENST00000349062 TLR3O15455 904 aaKnown RBP14.8□□□□□ -0.04
TRIM4-201ENST00000349062 STAM2O75886 525 aa14.8□□□□□ -0.04
TRIM4-201ENST00000349062 TCF4P15884 667 aa14.8□□□□□ -0.04
TRIM4-201ENST00000349062 LACTBP83111 547 aaPredicted RBP14.8□□□□□ -0.04
TRIM4-201ENST00000349062 PSMD6Q15008 389 aa14.8□□□□□ -0.04
TRIM4-201ENST00000349062 AMHR2Q16671 573 aa14.8□□□□□ -0.04
TRIM4-201ENST00000349062 CLEC16AQ2KHT3 1053 aa14.8□□□□□ -0.04
TRIM4-201ENST00000349062 SYCP2LQ5T4T6 812 aa14.8□□□□□ -0.04
TRIM4-201ENST00000349062 SLFN11Q7Z7L1 901 aa14.8□□□□□ -0.04
TRIM4-201ENST00000349062 JAMLQ86YT9 394 aa14.8□□□□□ -0.04
TRIM4-201ENST00000349062 TEX2Q8IWB9 1127 aa14.8□□□□□ -0.04
TRIM4-201ENST00000349062 TJP2Q9UDY2 1190 aa14.8□□□□□ -0.04
TRIM4-201ENST00000349062 INTUQ9ULD6 942 aa14.8□□□□□ -0.04
TRIM4-201ENST00000349062 PCDHB2Q9Y5E7 798 aa14.8□□□□□ -0.04
TRIM4-201ENST00000349062 H0YCG3 227 aa14.79□□□□□ -0.04
TRIM4-201ENST00000349062 RFX1P22670 979 aa14.79□□□□□ -0.04
TRIM4-201ENST00000349062 ACTN3Q08043 901 aaPredicted RBP14.79□□□□□ -0.04
TRIM4-201ENST00000349062 GLE1Q53GS7 698 aaKnown RBP14.79□□□□□ -0.04
TRIM4-201ENST00000349062 FMO2Q99518 471 aa14.79□□□□□ -0.04
TRIM4-201ENST00000349062 CD248Q9HCU0 757 aa14.79□□□□□ -0.04
TRIM4-201ENST00000349062 CPA4Q9UI42 421 aa14.79□□□□□ -0.04
TRIM4-201ENST00000349062 MYPNQ86TC9 1320 aa14.79□□□□□ -0.04
TRIM4-201ENST00000349062 E7EVH7 732 aa14.79□□□□□ -0.04
TRIM4-201ENST00000349062 GRAP2O75791 330 aa14.79□□□□□ -0.04
TRIM4-201ENST00000349062 IQCF3P0C7M6 154 aa14.79□□□□□ -0.04
TRIM4-201ENST00000349062 RARAP10276 462 aa14.79□□□□□ -0.04
TRIM4-201ENST00000349062 RWDD2BP57060 319 aa14.79□□□□□ -0.04
TRIM4-201ENST00000349062 SNAPC2Q13487 334 aa14.79□□□□□ -0.04
TRIM4-201ENST00000349062 TTC27Q6P3X3 843 aa14.79□□□□□ -0.04
TRIM4-201ENST00000349062 MCEEQ96PE7 176 aa14.79□□□□□ -0.04
TRIM4-201ENST00000349062 TTC7AQ9ULT0 858 aaPredicted RBP14.79□□□□□ -0.04
TRIM4-201ENST00000349062 NCANO14594 1321 aa14.79□□□□□ -0.04
TRIM4-201ENST00000349062 MAFO75444 373 aaPredicted RBP14.79□□□□□ -0.04
TRIM4-201ENST00000349062 TOM1L1O75674 476 aa14.79□□□□□ -0.04
TRIM4-201ENST00000349062 KCNT1Q5JUK3 1230 aa14.79□□□□□ -0.04
TRIM4-201ENST00000349062 GPAT2Q6NUI2 795 aa14.79□□□□□ -0.04
TRIM4-201ENST00000349062 FMNL3Q8IVF7 1028 aa14.79□□□□□ -0.04
TRIM4-201ENST00000349062 MCOLN2Q8IZK6 566 aa14.79□□□□□ -0.04
TRIM4-201ENST00000349062 PRELID2Q8N945 189 aa14.79□□□□□ -0.04
TRIM4-201ENST00000349062 FBXL18Q96ME1 805 aa14.79□□□□□ -0.04
TRIM4-201ENST00000349062 ZWILCHQ9H900 591 aa14.79□□□□□ -0.04
TRIM4-201ENST00000349062 CHST7Q9NS84 486 aa14.79□□□□□ -0.04
TRIM4-201ENST00000349062 MTUS1Q9ULD2 1270 aa14.79□□□□□ -0.04
TRIM4-201ENST00000349062 NENFQ9UMX5 172 aa14.79□□□□□ -0.04
TRIM4-201ENST00000349062 DYNC1LI2O43237 492 aaPredicted RBP14.78□□□□□ -0.04
TRIM4-201ENST00000349062 IFNB1P01574 187 aa14.78□□□□□ -0.04
TRIM4-201ENST00000349062 CLTAP09496 248 aa14.78□□□□□ -0.04
TRIM4-201ENST00000349062 CCDC38Q502W7 563 aa14.78□□□□□ -0.04
TRIM4-201ENST00000349062 EP400NLQ6ZTU2 488 aa14.78□□□□□ -0.04
TRIM4-201ENST00000349062 FASTKD5Q7L8L6 764 aaKnown RBP14.78□□□□□ -0.04
TRIM4-201ENST00000349062 EMC1Q8N766 993 aa14.78□□□□□ -0.04
TRIM4-201ENST00000349062 GPRC5AQ8NFJ5 357 aa14.78□□□□□ -0.04
TRIM4-201ENST00000349062 ZNF606Q8WXB4 792 aa14.78□□□□□ -0.04
TRIM4-201ENST00000349062 CISHQ9NSE2 258 aa14.78□□□□□ -0.04
TRIM4-201ENST00000349062 PCSK1NQ9UHG2 260 aa14.78□□□□□ -0.04
TRIM4-201ENST00000349062 GTF3C4Q9UKN8 822 aa14.78□□□□□ -0.04
TRIM4-201ENST00000349062 BTNL10A8MVZ5 291 aa14.78□□□□□ -0.04
TRIM4-201ENST00000349062 SOCS7O14512 581 aa14.78□□□□□ -0.04
TRIM4-201ENST00000349062 ACSL3O95573 720 aa14.78□□□□□ -0.04
TRIM4-201ENST00000349062 ITGB3P05106 788 aa14.78□□□□□ -0.04
TRIM4-201ENST00000349062 NFICP08651 508 aa14.78□□□□□ -0.04
TRIM4-201ENST00000349062 DUOXA2Q1HG44 320 aa14.78□□□□□ -0.04
TRIM4-201ENST00000349062 LIN9Q5TKA1 542 aa14.78□□□□□ -0.04
TRIM4-201ENST00000349062 TAX1BP1Q86VP1 789 aa14.78□□□□□ -0.04
TRIM4-201ENST00000349062 DDX1Q92499 740 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms