RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 RALBP11234 206 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 AVPR1AP37288 418 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 RWDD2BP57060 319 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 ANKRD20A3Q5VUR7 823 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 GLIS3Q8NEA6 775 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 ZNF473Q8WTR7 871 aaKnown RBP11.48□□□□□ -0.57
CLCN6-202ENST00000346436 CASKIN2Q8WXE0 1202 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 EHD4Q9H223 541 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 H3BRJ5 948 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 ALDH1A2O94788 518 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 ATP6V1E1P36543 226 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 SLC26A2P50443 739 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 NAB2Q15742 525 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 LRRC8CQ8TDW0 803 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 CCT8L2Q96SF2 557 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 FAM118BQ9BPY3 351 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 SENP6Q9GZR1 1112 aaPredicted RBP11.48□□□□□ -0.57
CLCN6-202ENST00000346436 RBAKQ9NYW8 714 aaPredicted RBP11.48□□□□□ -0.57
CLCN6-202ENST00000346436 GOLGA8MH3BSY2 632 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 PEX19P40855 299 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 MDH1P40925 334 aaKnown RBP11.48□□□□□ -0.57
CLCN6-202ENST00000346436 GPC5P78333 572 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 CDR2Q01850 454 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 PAPD7Q5XG87 772 aaKnown RBP11.48□□□□□ -0.57
CLCN6-202ENST00000346436 WDR93Q6P2C0 686 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 MMGT1Q8N4V1 131 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 RILPQ96NA2 401 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 YIPF2Q9BWQ6 316 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 CNOT10Q9H9A5 744 aaKnown RBP11.48□□□□□ -0.57
CLCN6-202ENST00000346436 KLHL8Q9P2G9 620 aaPredicted RBP11.48□□□□□ -0.57
CLCN6-202ENST00000346436 CLCA2Q9UQC9 943 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 PPME1Q9Y570 386 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 HIP1RO75146 1068 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 APLP1P51693 650 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 PHEXP78562 749 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 PPIL2Q13356 520 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 RHOT2Q8IXI1 618 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 SLC30A5Q8TAD4 765 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 ACSF2Q96CM8 615 aaPredicted RBP11.48□□□□□ -0.57
CLCN6-202ENST00000346436 MTMR8Q96EF0 704 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 SLC28A3Q9HAS3 691 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 PSD3Q9NYI0 1048 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.48□□□□□ -0.57
CLCN6-202ENST00000346436 MST1RQ04912 1400 aa11.48□□□□□ -0.57
CLCN6-202ENST00000346436 EIF3DO15371 548 aaKnown RBP eCLIP11.47□□□□□ -0.57
CLCN6-202ENST00000346436 CYTH3O43739 400 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 INHBAP08476 426 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 PHKG1Q16816 387 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 THEMIS2Q5TEJ8 643 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 NXNQ6DKJ4 435 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 CCDC137Q6PK04 289 aaKnown RBP11.47□□□□□ -0.57
CLCN6-202ENST00000346436 SH3RF1Q7Z6J0 888 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 FRMD5Q7Z6J6 570 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 CATSPER3Q86XQ3 398 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 TMEM139Q8IV31 216 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 TNS4Q8IZW8 715 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 KCND1Q9NSA2 647 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 DSEQ9UL01 958 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 UBR1Q8IWV7 1749 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 LRRD1A4D1F6 860 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 RCCD1A6NED2 376 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 CFAP99D6REC4 459 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 CYP26A1O43174 497 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 GUCY2CP25092 1073 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 KLRC2P26717 231 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 YWHABP31946 246 aaKnown RBP11.47□□□□□ -0.57
CLCN6-202ENST00000346436 LSP1P33241 339 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 VAMP7P51809 220 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 LAMB3Q13751 1172 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 PAN2Q504Q3 1202 aaKnown RBP11.47□□□□□ -0.57
CLCN6-202ENST00000346436 ZNF564Q8TBZ8 553 aaPredicted RBP11.47□□□□□ -0.57
CLCN6-202ENST00000346436 HVCN1Q96D96 273 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 PRR12Q9ULL5 1215 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 SLC26A4O43511 780 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 CEP120Q8N960 986 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 MDM1Q8TC05 714 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 RNF217Q8TC41 542 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 SNX19Q92543 992 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 CALR3Q96L12 384 aaKnown RBP11.47□□□□□ -0.57
CLCN6-202ENST00000346436 HSD3B7Q9H2F3 369 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 FAM237AA0A1B0GTK4 181 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 C2CD2LO14523 706 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 MED24O75448 989 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 GLI1P08151 1106 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 HSPA6P17066 643 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 CASP4P49662 377 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 EIF3BP55884 814 aaKnown RBP11.47□□□□□ -0.57
CLCN6-202ENST00000346436 SLMAPQ14BN4 828 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 CDO1Q16878 200 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 TAF2Q6P1X5 1199 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 USP38Q8NB14 1042 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 ANKS1AQ92625 1134 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 RNF25Q96BH1 459 aaPredicted RBP11.47□□□□□ -0.57
CLCN6-202ENST00000346436 ABHD16BQ9H3Z7 469 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 SMYD2Q9NRG4 433 aa11.47□□□□□ -0.57
CLCN6-202ENST00000346436 RGPD8O14715 1765 aaPredicted RBP11.46□□□□□ -0.57
CLCN6-202ENST00000346436 EXOC1LA0A1B0GW35 172 aa11.46□□□□□ -0.57
CLCN6-202ENST00000346436 PDE2AO00408 941 aaPredicted RBP11.46□□□□□ -0.57
CLCN6-202ENST00000346436 ATICP31939 592 aa11.46□□□□□ -0.57
CLCN6-202ENST00000346436 FXR2P51116 673 aaKnown RBP eCLIP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms