RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 TRIM73Q86UV7 250 aa15.76■□□□□ 0.11
CLCN1-201ENST00000343257 DENND1AQ8TEH3 1009 aa15.76■□□□□ 0.11
CLCN1-201ENST00000343257 MKNK1Q9BUB5 465 aa15.76■□□□□ 0.11
CLCN1-201ENST00000343257 NHSL1Q5SYE7 1610 aa15.76■□□□□ 0.11
CLCN1-201ENST00000343257 ROBO3Q96MS0 1386 aa15.75■□□□□ 0.11
CLCN1-201ENST00000343257 FSCN2O14926 492 aa15.75■□□□□ 0.11
CLCN1-201ENST00000343257 LYNP07948 512 aa15.75■□□□□ 0.11
CLCN1-201ENST00000343257 PTK6Q13882 451 aa15.75■□□□□ 0.11
CLCN1-201ENST00000343257 ZRSR2Q15696 482 aaKnown RBP15.75■□□□□ 0.11
CLCN1-201ENST00000343257 SLFN12Q8IYM2 578 aa15.75■□□□□ 0.11
CLCN1-201ENST00000343257 ZBED8Q8IZ13 594 aa15.75■□□□□ 0.11
CLCN1-201ENST00000343257 EPS8L1Q8TE68 723 aa15.75■□□□□ 0.11
CLCN1-201ENST00000343257 SH3TC2Q8TF17 1288 aa15.75■□□□□ 0.11
CLCN1-201ENST00000343257 FHDC1Q9C0D6 1143 aaPredicted RBP15.75■□□□□ 0.11
CLCN1-201ENST00000343257 SRP68Q9UHB9 627 aaKnown RBP15.75■□□□□ 0.11
CLCN1-201ENST00000343257 LDHCP07864 332 aa15.75■□□□□ 0.11
CLCN1-201ENST00000343257 TROVE2P10155 538 aaKnown RBP eCLIP15.75■□□□□ 0.11
CLCN1-201ENST00000343257 NR1H3Q13133 447 aa15.75■□□□□ 0.11
CLCN1-201ENST00000343257 NFIXQ14938 502 aa15.75■□□□□ 0.11
CLCN1-201ENST00000343257 ATL2Q8NHH9 583 aa15.75■□□□□ 0.11
CLCN1-201ENST00000343257 FBXO27Q8NI29 283 aa15.75■□□□□ 0.11
CLCN1-201ENST00000343257 CCDC127Q96BQ5 260 aa15.75■□□□□ 0.11
CLCN1-201ENST00000343257 TMEM117Q9H0C3 514 aa15.75■□□□□ 0.11
CLCN1-201ENST00000343257 RHBDL2Q9NX52 303 aa15.75■□□□□ 0.11
CLCN1-201ENST00000343257 SLC17A7Q9P2U7 560 aa15.75■□□□□ 0.11
CLCN1-201ENST00000343257 ATF5Q9Y2D1 282 aaPredicted RBP15.75■□□□□ 0.11
CLCN1-201ENST00000343257 hCG_1984214I3L0E3 225 aa15.75■□□□□ 0.11
CLCN1-201ENST00000343257 OPHN1O60890 802 aa15.75■□□□□ 0.11
CLCN1-201ENST00000343257 PGM1P36871 562 aa15.75■□□□□ 0.11
CLCN1-201ENST00000343257 CTC1Q2NKJ3 1217 aa15.75■□□□□ 0.11
CLCN1-201ENST00000343257 NBPF5PQ86XG9 351 aaPredicted RBP15.75■□□□□ 0.11
CLCN1-201ENST00000343257 ZNF713Q8N859 430 aaPredicted RBP15.75■□□□□ 0.11
CLCN1-201ENST00000343257 CFAP61Q8NHU2 1237 aa15.75■□□□□ 0.11
CLCN1-201ENST00000343257 LMO3Q8TAP4 145 aa15.75■□□□□ 0.11
CLCN1-201ENST00000343257 ETNPPLQ8TBG4 499 aa15.75■□□□□ 0.11
CLCN1-201ENST00000343257 NSL1Q96IY1 281 aa15.75■□□□□ 0.11
CLCN1-201ENST00000343257 TRAPPC9Q96Q05 1148 aa15.75■□□□□ 0.11
CLCN1-201ENST00000343257 ZNF184Q99676 751 aaPredicted RBP15.75■□□□□ 0.11
CLCN1-201ENST00000343257 ANKRD2Q9GZV1 360 aa15.75■□□□□ 0.11
CLCN1-201ENST00000343257 PARVGQ9HBI0 331 aa15.75■□□□□ 0.11
CLCN1-201ENST00000343257 PICK1Q9NRD5 415 aa15.75■□□□□ 0.11
CLCN1-201ENST00000343257 TAS2R1Q9NYW7 299 aa15.75■□□□□ 0.11
CLCN1-201ENST00000343257 A6NJR5 290 aa15.74■□□□□ 0.11
CLCN1-201ENST00000343257 MSH4O15457 936 aa15.74■□□□□ 0.11
CLCN1-201ENST00000343257 CREB3O43889 395 aa15.74■□□□□ 0.11
CLCN1-201ENST00000343257 IFNB1P01574 187 aa15.74■□□□□ 0.11
CLCN1-201ENST00000343257 SMARCA1P28370 1054 aa15.74■□□□□ 0.11
CLCN1-201ENST00000343257 DEUP1Q05D60 604 aa15.74■□□□□ 0.11
CLCN1-201ENST00000343257 CPA5Q8WXQ8 436 aa15.74■□□□□ 0.11
CLCN1-201ENST00000343257 GATA6Q92908 595 aa15.74■□□□□ 0.11
CLCN1-201ENST00000343257 PTPRN2Q92932 1015 aa15.74■□□□□ 0.11
CLCN1-201ENST00000343257 PREBQ9HCU5 417 aa15.74■□□□□ 0.11
CLCN1-201ENST00000343257 PKD2L1Q9P0L9 805 aa15.74■□□□□ 0.11
CLCN1-201ENST00000343257 NEU2Q9Y3R4 380 aa15.74■□□□□ 0.11
CLCN1-201ENST00000343257 LAMB1P07942 1786 aa15.74■□□□□ 0.11
CLCN1-201ENST00000343257 KRT10P13645 584 aa15.74■□□□□ 0.11
CLCN1-201ENST00000343257 KRT5P13647 590 aa15.74■□□□□ 0.11
CLCN1-201ENST00000343257 ARFIP2P53365 341 aa15.74■□□□□ 0.11
CLCN1-201ENST00000343257 FMO1Q01740 532 aa15.74■□□□□ 0.11
CLCN1-201ENST00000343257 BMT2Q1RMZ1 405 aa15.74■□□□□ 0.11
CLCN1-201ENST00000343257 SLC45A4Q5BKX6 768 aa15.74■□□□□ 0.11
CLCN1-201ENST00000343257 CBWD1Q9BRT8 395 aa15.74■□□□□ 0.11
CLCN1-201ENST00000343257 SYNCQ9H7C4 482 aa15.74■□□□□ 0.11
CLCN1-201ENST00000343257 C10orf88Q9H8K7 445 aa15.74■□□□□ 0.11
CLCN1-201ENST00000343257 ATP8B3O60423 1300 aa15.74■□□□□ 0.11
CLCN1-201ENST00000343257 ENO1P06733 434 aaKnown RBP15.73■□□□□ 0.11
CLCN1-201ENST00000343257 AP1B1Q10567 949 aa15.73■□□□□ 0.11
CLCN1-201ENST00000343257 RASA3Q14644 834 aa15.73■□□□□ 0.11
CLCN1-201ENST00000343257 C12orf50Q8NA57 414 aaPredicted RBP15.73■□□□□ 0.11
CLCN1-201ENST00000343257 NMD3Q96D46 503 aaKnown RBP15.73■□□□□ 0.11
CLCN1-201ENST00000343257 ETNK2Q9NVF9 386 aa15.73■□□□□ 0.11
CLCN1-201ENST00000343257 ANKFY1Q9P2R3 1169 aa15.73■□□□□ 0.11
CLCN1-201ENST00000343257 H3BRJ5 948 aa15.73■□□□□ 0.11
CLCN1-201ENST00000343257 STK10O94804 968 aaKnown RBP15.73■□□□□ 0.11
CLCN1-201ENST00000343257 GSTA2P09210 222 aa15.73■□□□□ 0.11
CLCN1-201ENST00000343257 OCRLQ01968 901 aa15.73■□□□□ 0.11
CLCN1-201ENST00000343257 KDSRQ06136 332 aa15.73■□□□□ 0.11
CLCN1-201ENST00000343257 DYNC1I2Q13409 638 aaKnown RBP15.73■□□□□ 0.11
CLCN1-201ENST00000343257 ATP13A4Q4VNC1 1196 aa15.73■□□□□ 0.11
CLCN1-201ENST00000343257 ANKS1BQ7Z6G8 1248 aa15.73■□□□□ 0.11
CLCN1-201ENST00000343257 SHKBP1Q8TBC3 707 aa15.73■□□□□ 0.11
CLCN1-201ENST00000343257 PLVAPQ9BX97 442 aa15.73■□□□□ 0.11
CLCN1-201ENST00000343257 TMEM120AQ9BXJ8 343 aa15.73■□□□□ 0.11
CLCN1-201ENST00000343257 DDX39AO00148 427 aaKnown RBP15.73■□□□□ 0.11
CLCN1-201ENST00000343257 C2CD2LO14523 706 aa15.73■□□□□ 0.11
CLCN1-201ENST00000343257 MAGEB2O15479 319 aa15.73■□□□□ 0.11
CLCN1-201ENST00000343257 ECE2O60344 883 aa15.73■□□□□ 0.11
CLCN1-201ENST00000343257 SORBS3O60504 671 aa15.73■□□□□ 0.11
CLCN1-201ENST00000343257 PSMC4P43686 418 aa15.73■□□□□ 0.11
CLCN1-201ENST00000343257 ZNF720Q7Z2F6 126 aa15.73■□□□□ 0.11
CLCN1-201ENST00000343257 TCP10LQ8TDR4 215 aa15.73■□□□□ 0.11
CLCN1-201ENST00000343257 TTC17Q96AE7 1141 aa15.73■□□□□ 0.11
CLCN1-201ENST00000343257 ACSF2Q96CM8 615 aaPredicted RBP15.73■□□□□ 0.11
CLCN1-201ENST00000343257 CFAP57Q96MR6 1250 aa15.73■□□□□ 0.11
CLCN1-201ENST00000343257 KREMEN1Q96MU8 473 aa15.73■□□□□ 0.11
CLCN1-201ENST00000343257 ZNF148Q9UQR1 794 aa15.73■□□□□ 0.11
CLCN1-201ENST00000343257 B2RBV5 119 aa15.72■□□□□ 0.11
CLCN1-201ENST00000343257 PPP4CP60510 307 aa15.72■□□□□ 0.11
CLCN1-201ENST00000343257 GAD2Q05329 585 aa15.72■□□□□ 0.11
CLCN1-201ENST00000343257 MEX3CQ5U5Q3 659 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms