RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 PDLIM7Q9NR12 457 aa17.42■□□□□ 0.38
LITAF-201ENST00000339430 C1orf112Q9NSG2 853 aa17.42■□□□□ 0.38
LITAF-201ENST00000339430 UVRAGQ9P2Y5 699 aa17.42■□□□□ 0.38
LITAF-201ENST00000339430 PLXNA1Q9UIW2 1896 aa17.42■□□□□ 0.38
LITAF-201ENST00000339430 TLDC2A0PJX2 215 aa17.42■□□□□ 0.38
LITAF-201ENST00000339430 RWDD2BP57060 319 aa17.42■□□□□ 0.38
LITAF-201ENST00000339430 NLRP11P59045 1033 aaKnown RBP17.42■□□□□ 0.38
LITAF-201ENST00000339430 MCCD1P59942 119 aaPredicted RBP17.42■□□□□ 0.38
LITAF-201ENST00000339430 LY6KQ17RY6 165 aa17.42■□□□□ 0.38
LITAF-201ENST00000339430 BRDTQ58F21 947 aaPredicted RBP17.42■□□□□ 0.38
LITAF-201ENST00000339430 DAB2IPQ5VWQ8 1189 aa17.42■□□□□ 0.38
LITAF-201ENST00000339430 TMEM51Q9NW97 253 aa17.42■□□□□ 0.38
LITAF-201ENST00000339430 MTUS1Q9ULD2 1270 aa17.42■□□□□ 0.38
LITAF-201ENST00000339430 ARIH2O95376 493 aa17.41■□□□□ 0.38
LITAF-201ENST00000339430 GGPS1O95749 300 aa17.41■□□□□ 0.38
LITAF-201ENST00000339430 TGFB3P10600 412 aa17.41■□□□□ 0.38
LITAF-201ENST00000339430 GARTP22102 1010 aa17.41■□□□□ 0.38
LITAF-201ENST00000339430 FGFR4P22455 802 aa17.41■□□□□ 0.38
LITAF-201ENST00000339430 GTF2H1P32780 548 aa17.41■□□□□ 0.38
LITAF-201ENST00000339430 SNX1Q13596 522 aa17.41■□□□□ 0.38
LITAF-201ENST00000339430 SIX1Q15475 284 aaPredicted RBP17.41■□□□□ 0.38
LITAF-201ENST00000339430 DENND2CQ68D51 928 aa17.41■□□□□ 0.38
LITAF-201ENST00000339430 ABHD15Q6UXT9 468 aa17.41■□□□□ 0.38
LITAF-201ENST00000339430 B4GALNT4Q76KP1 1039 aa17.41■□□□□ 0.38
LITAF-201ENST00000339430 C1orf54Q8WWF1 131 aa17.41■□□□□ 0.38
LITAF-201ENST00000339430 PABPC3Q9H361 631 aaKnown RBP17.41■□□□□ 0.38
LITAF-201ENST00000339430 SEMA4AQ9H3S1 761 aa17.41■□□□□ 0.38
LITAF-201ENST00000339430 LOC102724159A0A0B4J2E5 919 aa17.4■□□□□ 0.38
LITAF-201ENST00000339430 AOC2O75106 756 aa17.4■□□□□ 0.38
LITAF-201ENST00000339430 POLGP54098 1239 aaPredicted RBP17.4■□□□□ 0.38
LITAF-201ENST00000339430 SLC29A2Q14542 456 aa17.4■□□□□ 0.38
LITAF-201ENST00000339430 PWP2Q15269 919 aaKnown RBP17.4■□□□□ 0.38
LITAF-201ENST00000339430 TADA2BQ86TJ2 420 aa17.4■□□□□ 0.38
LITAF-201ENST00000339430 MDM1Q8TC05 714 aa17.4■□□□□ 0.38
LITAF-201ENST00000339430 PPM1EQ8WY54 764 aa17.4■□□□□ 0.38
LITAF-201ENST00000339430 ZBTB45Q96K62 511 aaPredicted RBP17.4■□□□□ 0.38
LITAF-201ENST00000339430 FNBP1Q96RU3 617 aa17.4■□□□□ 0.38
LITAF-201ENST00000339430 PDGFCQ9NRA1 345 aa17.4■□□□□ 0.38
LITAF-201ENST00000339430 ARHGAP28Q9P2N2 729 aa17.4■□□□□ 0.38
LITAF-201ENST00000339430 PTPRJQ12913 1337 aa17.4■□□□□ 0.38
LITAF-201ENST00000339430 A0A087WUV0 522 aaPredicted RBP17.4■□□□□ 0.38
LITAF-201ENST00000339430 SLC15A5A6NIM6 579 aa17.4■□□□□ 0.38
LITAF-201ENST00000339430 PODXLO00592 558 aa17.4■□□□□ 0.38
LITAF-201ENST00000339430 DKC1O60832 514 aaKnown RBP eCLIP17.4■□□□□ 0.38
LITAF-201ENST00000339430 SCP2P22307 547 aa17.4■□□□□ 0.38
LITAF-201ENST00000339430 RRM1P23921 792 aa17.4■□□□□ 0.38
LITAF-201ENST00000339430 DRG2P55039 364 aaKnown RBP17.4■□□□□ 0.38
LITAF-201ENST00000339430 EMC2Q15006 297 aa17.4■□□□□ 0.38
LITAF-201ENST00000339430 DEFB115Q30KQ5 88 aa17.4■□□□□ 0.38
LITAF-201ENST00000339430 PACS2Q86VP3 889 aa17.4■□□□□ 0.38
LITAF-201ENST00000339430 CCDC25Q86WR0 208 aa17.4■□□□□ 0.38
LITAF-201ENST00000339430 PASD1Q8IV76 773 aa17.4■□□□□ 0.38
LITAF-201ENST00000339430 PSPC1Q8WXF1 523 aaKnown RBP17.4■□□□□ 0.38
LITAF-201ENST00000339430 FARP2O94887 1054 aaPredicted RBP17.39■□□□□ 0.38
LITAF-201ENST00000339430 FAM107AO95990 144 aa17.39■□□□□ 0.38
LITAF-201ENST00000339430 HLA-DRAP01903 254 aa17.39■□□□□ 0.38
LITAF-201ENST00000339430 CFHP08603 1231 aa17.39■□□□□ 0.38
LITAF-201ENST00000339430 UNGP13051 313 aaPredicted RBP17.39■□□□□ 0.38
LITAF-201ENST00000339430 PIK3CAP42336 1068 aa17.39■□□□□ 0.38
LITAF-201ENST00000339430 EIF3BP55884 814 aaKnown RBP17.39■□□□□ 0.38
LITAF-201ENST00000339430 GCNT1Q02742 428 aa17.39■□□□□ 0.38
LITAF-201ENST00000339430 NOGQ13253 232 aa17.39■□□□□ 0.38
LITAF-201ENST00000339430 NEDD9Q14511 834 aa17.39■□□□□ 0.38
LITAF-201ENST00000339430 TDRD10Q5VZ19 366 aaKnown RBP17.39■□□□□ 0.38
LITAF-201ENST00000339430 CAPNS2Q96L46 248 aa17.39■□□□□ 0.38
LITAF-201ENST00000339430 HAPLN2Q9GZV7 340 aa17.39■□□□□ 0.38
LITAF-201ENST00000339430 MROH7Q68CQ1 1323 aa17.39■□□□□ 0.37
LITAF-201ENST00000339430 LRRIQ4A6NIV6 560 aa17.39■□□□□ 0.37
LITAF-201ENST00000339430 EXTL3O43909 919 aa17.39■□□□□ 0.37
LITAF-201ENST00000339430 ATP4AP20648 1035 aa17.39■□□□□ 0.37
LITAF-201ENST00000339430 PPP1R7Q15435 360 aa17.39■□□□□ 0.37
LITAF-201ENST00000339430 CYP1B1Q16678 543 aa17.39■□□□□ 0.37
LITAF-201ENST00000339430 SEZ6Q53EL9 994 aa17.39■□□□□ 0.37
LITAF-201ENST00000339430 ZBTB41Q5SVQ8 909 aa17.39■□□□□ 0.37
LITAF-201ENST00000339430 TMEM63BQ5T3F8 832 aa17.39■□□□□ 0.37
LITAF-201ENST00000339430 MIS18BP1Q6P0N0 1132 aa17.39■□□□□ 0.37
LITAF-201ENST00000339430 C15orf39Q6ZRI6 1047 aa17.39■□□□□ 0.37
LITAF-201ENST00000339430 MCOLN2Q8IZK6 566 aa17.39■□□□□ 0.37
LITAF-201ENST00000339430 MAML3Q96JK9 1138 aa17.39■□□□□ 0.37
LITAF-201ENST00000339430 CREBZFQ9NS37 354 aa17.39■□□□□ 0.37
LITAF-201ENST00000339430 ANKFY1Q9P2R3 1169 aa17.39■□□□□ 0.37
LITAF-201ENST00000339430 MTRF1LQ9UGC7 380 aaKnown RBP17.39■□□□□ 0.37
LITAF-201ENST00000339430 AGO2Q9UKV8 859 aaKnown RBP17.39■□□□□ 0.37
LITAF-201ENST00000339430 GMNCA6NCL1 334 aa17.38■□□□□ 0.37
LITAF-201ENST00000339430 CA12O43570 354 aa17.38■□□□□ 0.37
LITAF-201ENST00000339430 SUPT20HL2P0C7V6 817 aa17.38■□□□□ 0.37
LITAF-201ENST00000339430 STRN3Q13033 797 aa17.38■□□□□ 0.37
LITAF-201ENST00000339430 WDR44Q5JSH3 913 aa17.38■□□□□ 0.37
LITAF-201ENST00000339430 KCNV1Q6PIU1 500 aa17.38■□□□□ 0.37
LITAF-201ENST00000339430 ZNF467Q7Z7K2 595 aaPredicted RBP17.38■□□□□ 0.37
LITAF-201ENST00000339430 HOOK3Q86VS8 718 aa17.38■□□□□ 0.37
LITAF-201ENST00000339430 NPLOC4Q8TAT6 608 aa17.38■□□□□ 0.37
LITAF-201ENST00000339430 ASAP3Q8TDY4 903 aa17.38■□□□□ 0.37
LITAF-201ENST00000339430 ATG4AQ8WYN0 398 aa17.38■□□□□ 0.37
LITAF-201ENST00000339430 RAPGEF5Q92565 580 aa17.38■□□□□ 0.37
LITAF-201ENST00000339430 CYFIP2Q96F07 1278 aa17.38■□□□□ 0.37
LITAF-201ENST00000339430 DOCK3Q8IZD9 2030 aa17.38■□□□□ 0.37
LITAF-201ENST00000339430 NUDT17P0C025 328 aa17.38■□□□□ 0.37
LITAF-201ENST00000339430 TXNP10599 105 aaKnown RBP17.38■□□□□ 0.37
LITAF-201ENST00000339430 HARSP12081 509 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms