RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 PALB2Q86YC2 1186 aa16.59■□□□□ 0.25
PRKN-201ENST00000338468 POMGNT1Q8WZA1 660 aa16.59■□□□□ 0.25
PRKN-201ENST00000338468 PAGE5Q96GU1 130 aa16.59■□□□□ 0.25
PRKN-201ENST00000338468 CBWD1Q9BRT8 395 aa16.59■□□□□ 0.25
PRKN-201ENST00000338468 PHF7Q9BWX1 381 aaPredicted RBP16.59■□□□□ 0.25
PRKN-201ENST00000338468 GOLPH3LQ9H4A5 285 aa16.59■□□□□ 0.25
PRKN-201ENST00000338468 UBQLN1Q9UMX0 589 aaKnown RBP16.59■□□□□ 0.25
PRKN-201ENST00000338468 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.58■□□□□ 0.24
PRKN-201ENST00000338468 PPEF2O14830 753 aa16.58■□□□□ 0.24
PRKN-201ENST00000338468 KLRC4O43908 158 aa16.58■□□□□ 0.24
PRKN-201ENST00000338468 PAPLNO95428 1278 aa16.58■□□□□ 0.24
PRKN-201ENST00000338468 C1RP00736 705 aa16.58■□□□□ 0.24
PRKN-201ENST00000338468 CREMQ03060 361 aa16.58■□□□□ 0.24
PRKN-201ENST00000338468 TCF15Q12870 199 aa16.58■□□□□ 0.24
PRKN-201ENST00000338468 POSTNQ15063 836 aa16.58■□□□□ 0.24
PRKN-201ENST00000338468 FAM26FQ5R3K3 315 aa16.58■□□□□ 0.24
PRKN-201ENST00000338468 SPATA1Q5VX52 437 aa16.58■□□□□ 0.24
PRKN-201ENST00000338468 TMC5Q6UXY8 1006 aa16.58■□□□□ 0.24
PRKN-201ENST00000338468 CD302Q8IX05 232 aa16.58■□□□□ 0.24
PRKN-201ENST00000338468 ZNF507Q8TCN5 953 aa16.58■□□□□ 0.24
PRKN-201ENST00000338468 FAM212AQ96EL1 285 aa16.58■□□□□ 0.24
PRKN-201ENST00000338468 TSPAN18Q96SJ8 248 aa16.58■□□□□ 0.24
PRKN-201ENST00000338468 PYM1Q9BRP8 204 aaKnown RBP16.58■□□□□ 0.24
PRKN-201ENST00000338468 POMKQ9H5K3 350 aa16.58■□□□□ 0.24
PRKN-201ENST00000338468 SFXN1Q9H9B4 322 aa16.58■□□□□ 0.24
PRKN-201ENST00000338468 MTRRQ9UBK8 725 aa16.58■□□□□ 0.24
PRKN-201ENST00000338468 KMT2EQ8IZD2 1858 aa16.57■□□□□ 0.24
PRKN-201ENST00000338468 PVALEFA0A1B0GWK0 134 aa16.57■□□□□ 0.24
PRKN-201ENST00000338468 A0A1W2PQ27 194 aa16.57■□□□□ 0.24
PRKN-201ENST00000338468 A0A1W2PQ64 194 aa16.57■□□□□ 0.24
PRKN-201ENST00000338468 A0A1W2PQD8 194 aa16.57■□□□□ 0.24
PRKN-201ENST00000338468 EIF3DO15371 548 aaKnown RBP eCLIP16.57■□□□□ 0.24
PRKN-201ENST00000338468 TRAPPC3O43617 180 aa16.57■□□□□ 0.24
PRKN-201ENST00000338468 TBC1D4O60343 1298 aa16.57■□□□□ 0.24
PRKN-201ENST00000338468 GARTP22102 1010 aa16.57■□□□□ 0.24
PRKN-201ENST00000338468 AARSP49588 968 aaKnown RBP eCLIP16.57■□□□□ 0.24
PRKN-201ENST00000338468 NUCB2P80303 420 aa16.57■□□□□ 0.24
PRKN-201ENST00000338468 POU5F1Q01860 360 aaKnown RBP16.57■□□□□ 0.24
PRKN-201ENST00000338468 SIGLEC14Q08ET2 396 aa16.57■□□□□ 0.24
PRKN-201ENST00000338468 CES5AQ6NT32 575 aa16.57■□□□□ 0.24
PRKN-201ENST00000338468 GPR149Q86SP6 731 aa16.57■□□□□ 0.24
PRKN-201ENST00000338468 EFCAB13Q8IY85 973 aa16.57■□□□□ 0.24
PRKN-201ENST00000338468 CEP57L1Q8IYX8 460 aa16.57■□□□□ 0.24
PRKN-201ENST00000338468 SYCP3Q8IZU3 236 aa16.57■□□□□ 0.24
PRKN-201ENST00000338468 CMASQ8NFW8 434 aaPredicted RBP16.57■□□□□ 0.24
PRKN-201ENST00000338468 SCFD1Q8WVM8 642 aa16.57■□□□□ 0.24
PRKN-201ENST00000338468 SAAL1Q96ER3 474 aa16.57■□□□□ 0.24
PRKN-201ENST00000338468 SUSD3Q96L08 255 aa16.57■□□□□ 0.24
PRKN-201ENST00000338468 FAM213AQ9BRX8 229 aa16.57■□□□□ 0.24
PRKN-201ENST00000338468 ASB7Q9H672 318 aa16.57■□□□□ 0.24
PRKN-201ENST00000338468 TMEM206Q9H813 350 aa16.57■□□□□ 0.24
PRKN-201ENST00000338468 CFAP54Q96N23 3096 aa16.57■□□□□ 0.24
PRKN-201ENST00000338468 MTCL1Q9Y4B5 1905 aaKnown RBP16.57■□□□□ 0.24
PRKN-201ENST00000338468 SYN3O14994 580 aa16.56■□□□□ 0.24
PRKN-201ENST00000338468 TGFB1I1O43294 461 aa16.56■□□□□ 0.24
PRKN-201ENST00000338468 GFRA3O60609 400 aa16.56■□□□□ 0.24
PRKN-201ENST00000338468 RFPL2O75678 378 aa16.56■□□□□ 0.24
PRKN-201ENST00000338468 SYKP43405 635 aa16.56■□□□□ 0.24
PRKN-201ENST00000338468 RAB33AQ14088 237 aa16.56■□□□□ 0.24
PRKN-201ENST00000338468 MRPL58Q14197 206 aaKnown RBP16.56■□□□□ 0.24
PRKN-201ENST00000338468 TMEM132DQ14C87 1099 aa16.56■□□□□ 0.24
PRKN-201ENST00000338468 VARS2Q5ST30 1063 aaKnown RBP16.56■□□□□ 0.24
PRKN-201ENST00000338468 PDXDC1Q6P996 788 aa16.56■□□□□ 0.24
PRKN-201ENST00000338468 KREMEN2Q8NCW0 462 aa16.56■□□□□ 0.24
PRKN-201ENST00000338468 HDAC7Q8WUI4 952 aa16.56■□□□□ 0.24
PRKN-201ENST00000338468 ZNF707Q96C28 371 aaPredicted RBP16.56■□□□□ 0.24
PRKN-201ENST00000338468 RPGRIP1Q96KN7 1286 aa16.56■□□□□ 0.24
PRKN-201ENST00000338468 IRF2BPLQ9H1B7 796 aa16.56■□□□□ 0.24
PRKN-201ENST00000338468 PCIF1Q9H4Z3 704 aa16.56■□□□□ 0.24
PRKN-201ENST00000338468 USP25Q9UHP3 1055 aa16.56■□□□□ 0.24
PRKN-201ENST00000338468 FBXW11Q9UKB1 542 aa16.56■□□□□ 0.24
PRKN-201ENST00000338468 DERAQ9Y315 318 aa16.56■□□□□ 0.24
PRKN-201ENST00000338468 C2CD2Q9Y426 696 aa16.56■□□□□ 0.24
PRKN-201ENST00000338468 NUB1Q9Y5A7 615 aa16.56■□□□□ 0.24
PRKN-201ENST00000338468 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.56■□□□□ 0.24
PRKN-201ENST00000338468 BACE2Q9Y5Z0 518 aa16.56■□□□□ 0.24
PRKN-201ENST00000338468 C2orf16Q68DN1 1984 aa16.56■□□□□ 0.24
PRKN-201ENST00000338468 DENND4AQ7Z401 1863 aa16.56■□□□□ 0.24
PRKN-201ENST00000338468 CACNA1HO95180 2353 aa16.55■□□□□ 0.24
PRKN-201ENST00000338468 ANO9A1A5B4 782 aa16.55■□□□□ 0.24
PRKN-201ENST00000338468 GOLGA8IPA6NC78 632 aa16.55■□□□□ 0.24
PRKN-201ENST00000338468 GOLGA8JA6NMD2 632 aa16.55■□□□□ 0.24
PRKN-201ENST00000338468 EXTL3O43909 919 aa16.55■□□□□ 0.24
PRKN-201ENST00000338468 OR1D2P34982 312 aa16.55■□□□□ 0.24
PRKN-201ENST00000338468 MTHFRP42898 656 aa16.55■□□□□ 0.24
PRKN-201ENST00000338468 BMT2Q1RMZ1 405 aa16.55■□□□□ 0.24
PRKN-201ENST00000338468 C9orf57Q5W0N0 161 aa16.55■□□□□ 0.24
PRKN-201ENST00000338468 ANKS3Q6ZW76 656 aa16.55■□□□□ 0.24
PRKN-201ENST00000338468 BRSK2Q8IWQ3 736 aa16.55■□□□□ 0.24
PRKN-201ENST00000338468 FSIP1Q8NA03 581 aa16.55■□□□□ 0.24
PRKN-201ENST00000338468 RIPOR3Q96MK2 946 aa16.55■□□□□ 0.24
PRKN-201ENST00000338468 NECTIN4Q96NY8 510 aa16.55■□□□□ 0.24
PRKN-201ENST00000338468 PLEKHA4Q9H4M7 779 aa16.55■□□□□ 0.24
PRKN-201ENST00000338468 SLC39A2Q9NP94 309 aa16.55■□□□□ 0.24
PRKN-201ENST00000338468 CDY1Q9Y6F8 540 aa16.55■□□□□ 0.24
PRKN-201ENST00000338468 CCDC195A0A1B0GUA6 201 aa16.54■□□□□ 0.24
PRKN-201ENST00000338468 M0QZQ0 153 aa16.54■□□□□ 0.24
PRKN-201ENST00000338468 PIRO00625 290 aa16.54■□□□□ 0.24
PRKN-201ENST00000338468 SPTLC1O15269 473 aa16.54■□□□□ 0.24
PRKN-201ENST00000338468 XPOTO43592 962 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms