RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 LCA5LO95447 670 aa15.84■□□□□ 0.13
CDK5RAP3-201ENST00000338399 ITGA4P13612 1032 aa15.84■□□□□ 0.13
CDK5RAP3-201ENST00000338399 KRT5P13647 590 aa15.84■□□□□ 0.13
CDK5RAP3-201ENST00000338399 IBSPP21815 317 aaPredicted RBP15.84■□□□□ 0.13
CDK5RAP3-201ENST00000338399 TBXAS1P24557 533 aaPredicted RBP15.84■□□□□ 0.13
CDK5RAP3-201ENST00000338399 CLCN1P35523 988 aa15.84■□□□□ 0.13
CDK5RAP3-201ENST00000338399 KRT83P78385 493 aa15.84■□□□□ 0.13
CDK5RAP3-201ENST00000338399 SPA17Q15506 151 aa15.84■□□□□ 0.13
CDK5RAP3-201ENST00000338399 HACE1Q8IYU2 909 aa15.84■□□□□ 0.13
CDK5RAP3-201ENST00000338399 LPPQ93052 612 aa15.84■□□□□ 0.13
CDK5RAP3-201ENST00000338399 C18orf25Q96B23 403 aaPredicted RBP15.84■□□□□ 0.13
CDK5RAP3-201ENST00000338399 C16orf45Q96MC5 204 aaPredicted RBP15.84■□□□□ 0.13
CDK5RAP3-201ENST00000338399 TUBGCP4Q9UGJ1 667 aa15.84■□□□□ 0.13
CDK5RAP3-201ENST00000338399 R3HCC1Q9Y3T6 440 aaKnown RBP15.84■□□□□ 0.13
CDK5RAP3-201ENST00000338399 A0A087X0T9 212 aa15.83■□□□□ 0.12
CDK5RAP3-201ENST00000338399 FAM228BP0C875 321 aa15.83■□□□□ 0.12
CDK5RAP3-201ENST00000338399 KCNE1P15382 129 aa15.83■□□□□ 0.12
CDK5RAP3-201ENST00000338399 RBP5P82980 135 aa15.83■□□□□ 0.12
CDK5RAP3-201ENST00000338399 BEST2Q8NFU1 509 aa15.83■□□□□ 0.12
CDK5RAP3-201ENST00000338399 TAF4BQ92750 862 aa15.83■□□□□ 0.12
CDK5RAP3-201ENST00000338399 IFIH1Q9BYX4 1025 aaKnown RBP15.83■□□□□ 0.12
CDK5RAP3-201ENST00000338399 NIF3L1Q9GZT8 377 aa15.83■□□□□ 0.12
CDK5RAP3-201ENST00000338399 LZTFL1Q9NQ48 299 aa15.83■□□□□ 0.12
CDK5RAP3-201ENST00000338399 NXF1Q9UBU9 619 aaKnown RBP15.83■□□□□ 0.12
CDK5RAP3-201ENST00000338399 POLIQ9UNA4 740 aa15.83■□□□□ 0.12
CDK5RAP3-201ENST00000338399 SCN1AP35498 2009 aa15.83■□□□□ 0.12
CDK5RAP3-201ENST00000338399 COL6A1P12109 1028 aa15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 RAB27AP51159 221 aa15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 SLC18A3Q16572 532 aa15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 WDR72Q3MJ13 1102 aa15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 TRIM60Q495X7 471 aa15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 ZNF667Q5HYK9 610 aa15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 ANKRD33Q7Z3H0 272 aa15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 MRPL10Q7Z7H8 261 aaKnown RBP15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 KIAA1328Q86T90 577 aa15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 SLC47A2Q86VL8 602 aa15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 ZFP42Q96MM3 310 aa15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 TRAIPQ9BWF2 469 aa15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 ACP6Q9NPH0 428 aa15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 UBQLN1Q9UMX0 589 aaKnown RBP15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 TFR2Q9UP52 801 aa15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 PCDHA13Q9Y5I0 950 aa15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 A0A0U1RQF3 1178 aa15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 GOLGA6L9A6NEM1 432 aa15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 DCDC2CA8MYV0 355 aa15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 ZNF623O75123 536 aa15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 ACO1P21399 889 aaKnown RBP15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 ATICP31939 592 aa15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 TLE2Q04725 743 aa15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 PTPN14Q15678 1187 aa15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 SCARA5Q6ZMJ2 495 aa15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 AGMOQ6ZNB7 445 aa15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 VPS36Q86VN1 386 aa15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 RNF169Q8NCN4 708 aa15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 SLC20A1Q8WUM9 679 aa15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 JAKMIP2Q96AA8 810 aa15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 HPDLQ96IR7 371 aa15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 GAD1Q99259 594 aa15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 AGPAT1Q99943 283 aa15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 PCDHB4Q9Y5E5 795 aa15.82■□□□□ 0.12
CDK5RAP3-201ENST00000338399 PITPNM1O00562 1244 aa15.81■□□□□ 0.12
CDK5RAP3-201ENST00000338399 DDX3XO00571 662 aaKnown RBP eCLIP15.81■□□□□ 0.121e-8■■■□□ 15.4
CDK5RAP3-201ENST00000338399 PTGESO14684 152 aa15.81■□□□□ 0.12
CDK5RAP3-201ENST00000338399 XPOTO43592 962 aaKnown RBP15.81■□□□□ 0.12
CDK5RAP3-201ENST00000338399 NBNO60934 754 aa15.81■□□□□ 0.12
CDK5RAP3-201ENST00000338399 ABL1P00519 1130 aa15.81■□□□□ 0.12
CDK5RAP3-201ENST00000338399 WEE2P0C1S8 567 aa15.81■□□□□ 0.12
CDK5RAP3-201ENST00000338399 MLH1P40692 756 aa15.81■□□□□ 0.12
CDK5RAP3-201ENST00000338399 MAGEA1P43355 309 aa15.81■□□□□ 0.12
CDK5RAP3-201ENST00000338399 ASPAP45381 313 aa15.81■□□□□ 0.12
CDK5RAP3-201ENST00000338399 FAAP100Q0VG06 881 aa15.81■□□□□ 0.12
CDK5RAP3-201ENST00000338399 BMS1Q14692 1282 aaKnown RBP15.81■□□□□ 0.12
CDK5RAP3-201ENST00000338399 GPNMBQ14956 572 aa15.81■□□□□ 0.12
CDK5RAP3-201ENST00000338399 TMEM270Q6UE05 265 aa15.81■□□□□ 0.12
CDK5RAP3-201ENST00000338399 NYAP1Q6ZVC0 841 aa15.81■□□□□ 0.12
CDK5RAP3-201ENST00000338399 RTN4RL1Q86UN2 441 aaPredicted RBP15.81■□□□□ 0.12
CDK5RAP3-201ENST00000338399 ANKLE1Q8NAG6 615 aa15.81■□□□□ 0.12
CDK5RAP3-201ENST00000338399 LNX1Q8TBB1 728 aaPredicted RBP15.81■□□□□ 0.12
CDK5RAP3-201ENST00000338399 TSPAN18Q96SJ8 248 aa15.81■□□□□ 0.12
CDK5RAP3-201ENST00000338399 SYT11Q9BT88 431 aa15.81■□□□□ 0.12
CDK5RAP3-201ENST00000338399 SCN5AQ14524 2016 aa15.81■□□□□ 0.12
CDK5RAP3-201ENST00000338399 KIAA0100Q14667 2235 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 RCCD1A6NED2 376 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 PPEF2O14830 753 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 CALCAP01258 141 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 ATF7P17544 494 aaPredicted RBP15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 CD58P19256 250 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 TNFAIP3P21580 790 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 ANXA13P27216 316 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 SOX4Q06945 474 aaPredicted RBP15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 ARHGAP29Q52LW3 1261 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 DNTTIP2Q5QJE6 756 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 NOP9Q86U38 636 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 GLYCTKQ8IVS8 523 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 UBR7Q8N806 425 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 OLIG1Q8TAK6 271 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 EPS8L1Q8TE68 723 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 PAWRQ96IZ0 340 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 TOX2Q96NM4 488 aa15.8■□□□□ 0.12
CDK5RAP3-201ENST00000338399 VRTNQ9H8Y1 702 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms