RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 SAFBQ15424 915 aaKnown RBP eCLIP12.59□□□□□ -0.39
CSMD2-202ENST00000338325 CTXN3Q4LDR2 81 aa12.59□□□□□ -0.39
CSMD2-202ENST00000338325 ZNF280DQ6N043 979 aa12.59□□□□□ -0.39
CSMD2-202ENST00000338325 HS6ST3Q8IZP7 471 aa12.59□□□□□ -0.39
CSMD2-202ENST00000338325 CELF5Q8N6W0 485 aaKnown RBP12.59□□□□□ -0.39
CSMD2-202ENST00000338325 ZMAT2Q96NC0 199 aaKnown RBP12.59□□□□□ -0.39
CSMD2-202ENST00000338325 MRPL4Q9BYD3 311 aaKnown RBP12.59□□□□□ -0.39
CSMD2-202ENST00000338325 LMAN1LQ9HAT1 526 aa12.59□□□□□ -0.39
CSMD2-202ENST00000338325 NUB1Q9Y5A7 615 aa12.59□□□□□ -0.39
CSMD2-202ENST00000338325 F5P12259 2224 aa12.59□□□□□ -0.39
CSMD2-202ENST00000338325 KRT37O76014 449 aa12.58□□□□□ -0.4
CSMD2-202ENST00000338325 RPL9P32969 192 aaKnown RBP12.58□□□□□ -0.4
CSMD2-202ENST00000338325 EPHA5P54756 1037 aa12.58□□□□□ -0.4
CSMD2-202ENST00000338325 SPEM2Q0P670 501 aa12.58□□□□□ -0.4
CSMD2-202ENST00000338325 ZNF174Q15697 407 aa12.58□□□□□ -0.4
CSMD2-202ENST00000338325 LPAL2Q16609 132 aa12.58□□□□□ -0.4
CSMD2-202ENST00000338325 ECM1Q16610 540 aa12.58□□□□□ -0.4
CSMD2-202ENST00000338325 LEMD2Q8NC56 503 aa12.58□□□□□ -0.4
CSMD2-202ENST00000338325 SUSD3Q96L08 255 aa12.58□□□□□ -0.4
CSMD2-202ENST00000338325 ZNF512Q96ME7 567 aaPredicted RBP12.58□□□□□ -0.4
CSMD2-202ENST00000338325 ZSWIM3Q96MP5 696 aa12.58□□□□□ -0.4
CSMD2-202ENST00000338325 ACAP3Q96P50 834 aa12.58□□□□□ -0.4
CSMD2-202ENST00000338325 TMEM134Q9H6X4 195 aa12.58□□□□□ -0.4
CSMD2-202ENST00000338325 TRPV4Q9HBA0 871 aa12.58□□□□□ -0.4
CSMD2-202ENST00000338325 PTPRHQ9HD43 1115 aa12.58□□□□□ -0.4
CSMD2-202ENST00000338325 ASAH2Q9NR71 780 aa12.58□□□□□ -0.4
CSMD2-202ENST00000338325 CEP72Q9P209 647 aa12.58□□□□□ -0.4
CSMD2-202ENST00000338325 CNTN3Q9P232 1028 aa12.58□□□□□ -0.4
CSMD2-202ENST00000338325 AFF4Q9UHB7 1163 aaKnown RBP12.58□□□□□ -0.4
CSMD2-202ENST00000338325 MAFFQ9ULX9 164 aa12.58□□□□□ -0.4
CSMD2-202ENST00000338325 EPG5Q9HCE0 2579 aa12.58□□□□□ -0.4
CSMD2-202ENST00000338325 SPTBN2O15020 2390 aa12.58□□□□□ -0.4
CSMD2-202ENST00000338325 NCANO14594 1321 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 CCDC169A6NNP5 214 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 ZNF263O14978 683 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 LRP3O75074 770 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 MOSPD3O75425 235 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 RETP07949 1114 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 MCF2P10911 925 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 MYL4P12829 197 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 CPB1P15086 417 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 MCM4P33991 863 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 VIPR2P41587 438 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 NPTX2P47972 431 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 PEX3P56589 373 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 SATB1Q01826 763 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 GUCY1B3Q02153 619 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 TWF1Q12792 350 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 DMP1Q13316 513 aaPredicted RBP12.57□□□□□ -0.4
CSMD2-202ENST00000338325 PRR23BQ6ZRT6 265 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 MFSD6LQ8IWD5 586 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 APPL2Q8NEU8 664 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 ZSCAN18Q8TBC5 510 aaPredicted RBP12.57□□□□□ -0.4
CSMD2-202ENST00000338325 NETO1Q8TDF5 533 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 C18orf25Q96B23 403 aaPredicted RBP12.57□□□□□ -0.4
CSMD2-202ENST00000338325 MSANTD3Q96H12 275 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 TARS2Q9BW92 718 aaKnown RBP12.57□□□□□ -0.4
CSMD2-202ENST00000338325 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.57□□□□□ -0.4
CSMD2-202ENST00000338325 KIF26AQ9ULI4 1882 aaPredicted RBP12.57□□□□□ -0.4
CSMD2-202ENST00000338325 TPRP12270 2363 aaKnown RBP12.57□□□□□ -0.4
CSMD2-202ENST00000338325 ARNTLO00327 626 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 ADRB1P08588 477 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 CHRNB1P11230 501 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 PROZP22891 400 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 CCNE1P24864 410 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 CXCL12P48061 93 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 FXR2P51116 673 aaKnown RBP eCLIP12.57□□□□□ -0.4
CSMD2-202ENST00000338325 MLLT6P55198 1093 aaPredicted RBP12.57□□□□□ -0.4
CSMD2-202ENST00000338325 TEAD2Q15562 447 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 MPZL3Q6UWV2 235 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 TAS1R3Q7RTX0 852 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 DDX12PQ92771 950 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 E2F7Q96AV8 911 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 TBC1D32Q96NH3 1257 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 DDX19AQ9NUU7 478 aaKnown RBP12.57□□□□□ -0.4
CSMD2-202ENST00000338325 ARHGAP28Q9P2N2 729 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 KIAA1024Q9UPX6 916 aa12.57□□□□□ -0.4
CSMD2-202ENST00000338325 ACACBO00763 2458 aa12.56□□□□□ -0.4
CSMD2-202ENST00000338325 GREB1Q4ZG55 1949 aa12.56□□□□□ -0.4
CSMD2-202ENST00000338325 HEPACAM2A8MVW5 462 aa12.56□□□□□ -0.4
CSMD2-202ENST00000338325 ABLIM1O14639 778 aa12.56□□□□□ -0.4
CSMD2-202ENST00000338325 SLC30A4O14863 429 aa12.56□□□□□ -0.4
CSMD2-202ENST00000338325 HARSP12081 509 aaKnown RBP12.56□□□□□ -0.4
CSMD2-202ENST00000338325 GJA1P17302 382 aa12.56□□□□□ -0.4
CSMD2-202ENST00000338325 ST3GAL1Q11201 340 aa12.56□□□□□ -0.4
CSMD2-202ENST00000338325 PTGDRQ13258 359 aa12.56□□□□□ -0.4
CSMD2-202ENST00000338325 SIM2Q14190 667 aaPredicted RBP12.56□□□□□ -0.4
CSMD2-202ENST00000338325 LRRC32Q14392 662 aa12.56□□□□□ -0.4
CSMD2-202ENST00000338325 GAS6Q14393 721 aa12.56□□□□□ -0.4
CSMD2-202ENST00000338325 TTC38Q5R3I4 469 aa12.56□□□□□ -0.4
CSMD2-202ENST00000338325 C1orf228Q6PIY5 440 aa12.56□□□□□ -0.4
CSMD2-202ENST00000338325 RNF19BQ6ZMZ0 732 aa12.56□□□□□ -0.4
CSMD2-202ENST00000338325 YAF2Q8IY57 180 aa12.56□□□□□ -0.4
CSMD2-202ENST00000338325 DAW1Q8N136 415 aa12.56□□□□□ -0.4
CSMD2-202ENST00000338325 SPEM1Q8N4L4 309 aa12.56□□□□□ -0.4
CSMD2-202ENST00000338325 CSGALNACT1Q8TDX6 532 aa12.56□□□□□ -0.4
CSMD2-202ENST00000338325 DRC1Q96MC2 740 aa12.56□□□□□ -0.4
CSMD2-202ENST00000338325 TCHPQ9BT92 498 aa12.56□□□□□ -0.4
CSMD2-202ENST00000338325 GPR88Q9GZN0 384 aa12.56□□□□□ -0.4
CSMD2-202ENST00000338325 FOXP1Q9H334 677 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms