RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 BCAR1P56945 870 aa17.81■□□□□ 0.44
SHOX-201ENST00000334060 TPM4P67936 248 aa17.81■□□□□ 0.44
SHOX-201ENST00000334060 DUOXA2Q1HG44 320 aa17.81■□□□□ 0.44
SHOX-201ENST00000334060 KRT39Q6A163 491 aa17.81■□□□□ 0.44
SHOX-201ENST00000334060 PHLDB3Q6NSJ2 640 aa17.81■□□□□ 0.44
SHOX-201ENST00000334060 APBB1IPQ7Z5R6 666 aaPredicted RBP17.81■□□□□ 0.44
SHOX-201ENST00000334060 CWH43Q9H720 699 aa17.81■□□□□ 0.44
SHOX-201ENST00000334060 NUB1Q9Y5A7 615 aa17.81■□□□□ 0.44
SHOX-201ENST00000334060 MRPL42Q9Y6G3 142 aaKnown RBP17.81■□□□□ 0.44
SHOX-201ENST00000334060 GBF1Q92538 1859 aa17.81■□□□□ 0.44
SHOX-201ENST00000334060 BAIAP3O94812 1187 aa17.8■□□□□ 0.44
SHOX-201ENST00000334060 KIF4AO95239 1232 aa17.8■□□□□ 0.44
SHOX-201ENST00000334060 GJB5O95377 273 aa17.8■□□□□ 0.44
SHOX-201ENST00000334060 PIK3CAP42336 1068 aa17.8■□□□□ 0.44
SHOX-201ENST00000334060 BRCC3P46736 316 aa17.8■□□□□ 0.44
SHOX-201ENST00000334060 RAP1GAPP47736 663 aa17.8■□□□□ 0.44
SHOX-201ENST00000334060 DSC1Q08554 894 aa17.8■□□□□ 0.44
SHOX-201ENST00000334060 NCOA4Q13772 614 aa17.8■□□□□ 0.44
SHOX-201ENST00000334060 C9orf57Q5W0N0 161 aa17.8■□□□□ 0.44
SHOX-201ENST00000334060 SCARA5Q6ZMJ2 495 aa17.8■□□□□ 0.44
SHOX-201ENST00000334060 RRAGAQ7L523 313 aa17.8■□□□□ 0.44
SHOX-201ENST00000334060 COLGALT2Q8IYK4 626 aa17.8■□□□□ 0.44
SHOX-201ENST00000334060 B3GALT6Q96L58 329 aa17.8■□□□□ 0.44
SHOX-201ENST00000334060 RNPC3Q96LT9 517 aaKnown RBP17.8■□□□□ 0.44
SHOX-201ENST00000334060 LSM14BQ9BX40 385 aaKnown RBP17.8■□□□□ 0.44
SHOX-201ENST00000334060 UBE2OQ9C0C9 1292 aaKnown RBP17.8■□□□□ 0.44
SHOX-201ENST00000334060 INTS2Q9H0H0 1204 aaKnown RBP17.8■□□□□ 0.44
SHOX-201ENST00000334060 SLC4A7Q9Y6M7 1214 aa17.8■□□□□ 0.44
SHOX-201ENST00000334060 INPPL1O15357 1258 aa17.8■□□□□ 0.44
SHOX-201ENST00000334060 ATP2A2P16615 1042 aaKnown RBP17.8■□□□□ 0.44
SHOX-201ENST00000334060 SLC11A1P49279 550 aa17.8■□□□□ 0.44
SHOX-201ENST00000334060 TRIM65Q6PJ69 517 aa17.8■□□□□ 0.44
SHOX-201ENST00000334060 HERC6Q8IVU3 1022 aa17.8■□□□□ 0.44
SHOX-201ENST00000334060 ANKRD36BP1Q96IX9 119 aa17.8■□□□□ 0.44
SHOX-201ENST00000334060 KIAA1671Q9BY89 1806 aa17.8■□□□□ 0.44
SHOX-201ENST00000334060 FAM170AA1A519 330 aa17.79■□□□□ 0.44
SHOX-201ENST00000334060 PHACTR2O75167 634 aa17.79■□□□□ 0.44
SHOX-201ENST00000334060 CSPG5O95196 566 aa17.79■□□□□ 0.44
SHOX-201ENST00000334060 SKIP12755 728 aa17.79■□□□□ 0.44
SHOX-201ENST00000334060 GRIK3Q13003 919 aa17.79■□□□□ 0.44
SHOX-201ENST00000334060 ARID5BQ14865 1188 aa17.79■□□□□ 0.44
SHOX-201ENST00000334060 KYAT1Q16773 422 aa17.79■□□□□ 0.44
SHOX-201ENST00000334060 CCDC142Q17RM4 750 aa17.79■□□□□ 0.44
SHOX-201ENST00000334060 UVSSAQ2YD98 709 aa17.79■□□□□ 0.44
SHOX-201ENST00000334060 ABI1Q8IZP0 508 aa17.79■□□□□ 0.44
SHOX-201ENST00000334060 SPC24Q8NBT2 197 aa17.79■□□□□ 0.44
SHOX-201ENST00000334060 FBXL13Q8NEE6 735 aa17.79■□□□□ 0.44
SHOX-201ENST00000334060 SDCBP2Q9H190 292 aa17.79■□□□□ 0.44
SHOX-201ENST00000334060 RAB20Q9NX57 234 aa17.79■□□□□ 0.44
SHOX-201ENST00000334060 UBQLN1Q9UMX0 589 aaKnown RBP17.79■□□□□ 0.44
SHOX-201ENST00000334060 NME7Q9Y5B8 376 aa17.79■□□□□ 0.44
SHOX-201ENST00000334060 FHOD1Q9Y613 1164 aa17.79■□□□□ 0.44
SHOX-201ENST00000334060 ANO9A1A5B4 782 aa17.79■□□□□ 0.44
SHOX-201ENST00000334060 PODXLO00592 558 aa17.79■□□□□ 0.44
SHOX-201ENST00000334060 PIRO00625 290 aa17.79■□□□□ 0.44
SHOX-201ENST00000334060 TNNC2P02585 160 aa17.79■□□□□ 0.44
SHOX-201ENST00000334060 OR1G1P47890 313 aa17.79■□□□□ 0.44
SHOX-201ENST00000334060 CDH8P55286 799 aa17.79■□□□□ 0.44
SHOX-201ENST00000334060 RNASELQ05823 741 aaKnown RBP17.79■□□□□ 0.44
SHOX-201ENST00000334060 UPP1Q16831 310 aa17.79■□□□□ 0.44
SHOX-201ENST00000334060 CHRDL2Q6WN34 429 aa17.79■□□□□ 0.44
SHOX-201ENST00000334060 HACE1Q8IYU2 909 aa17.79■□□□□ 0.44
SHOX-201ENST00000334060 YME1L1Q96TA2 773 aa17.79■□□□□ 0.44
SHOX-201ENST00000334060 MARCH5Q9NX47 278 aa17.79■□□□□ 0.44
SHOX-201ENST00000334060 YBX2Q9Y2T7 364 aaKnown RBP17.79■□□□□ 0.44
SHOX-201ENST00000334060 COQ4Q9Y3A0 265 aa17.79■□□□□ 0.44
SHOX-201ENST00000334060 TIMM13Q9Y5L4 95 aaPredicted RBP17.79■□□□□ 0.44
SHOX-201ENST00000334060 CLSTN1O94985 981 aa17.78■□□□□ 0.44
SHOX-201ENST00000334060 ORC1Q13415 861 aa17.78■□□□□ 0.44
SHOX-201ENST00000334060 TUSC3Q13454 348 aa17.78■□□□□ 0.44
SHOX-201ENST00000334060 EXOC3L4Q17RC7 722 aa17.78■□□□□ 0.44
SHOX-201ENST00000334060 E4F1Q66K89 784 aaPredicted RBP17.78■□□□□ 0.44
SHOX-201ENST00000334060 CPLX3Q8WVH0 158 aa17.78■□□□□ 0.44
SHOX-201ENST00000334060 GANQ9H2C0 597 aa17.78■□□□□ 0.44
SHOX-201ENST00000334060 SMYD3Q9H7B4 428 aa17.78■□□□□ 0.44
SHOX-201ENST00000334060 ACP6Q9NPH0 428 aa17.78■□□□□ 0.44
SHOX-201ENST00000334060 NXF1Q9UBU9 619 aaKnown RBP17.78■□□□□ 0.44
SHOX-201ENST00000334060 MSNP26038 577 aaKnown RBP17.77■□□□□ 0.44
SHOX-201ENST00000334060 BTG3Q14201 252 aaPredicted RBP17.77■□□□□ 0.44
SHOX-201ENST00000334060 CD302Q8IX05 232 aa17.77■□□□□ 0.44
SHOX-201ENST00000334060 EHBP1Q8NDI1 1231 aa17.77■□□□□ 0.44
SHOX-201ENST00000334060 ANKRD20A12PQ8NF67 263 aa17.77■□□□□ 0.44
SHOX-201ENST00000334060 BEST2Q8NFU1 509 aa17.77■□□□□ 0.44
SHOX-201ENST00000334060 KREMEN1Q96MU8 473 aa17.77■□□□□ 0.44
SHOX-201ENST00000334060 LPIN3Q9BQK8 851 aa17.77■□□□□ 0.44
SHOX-201ENST00000334060 VN1R3Q9BXE9 311 aa17.77■□□□□ 0.44
SHOX-201ENST00000334060 HMGXB4Q9UGU5 601 aa17.77■□□□□ 0.44
SHOX-201ENST00000334060 MTUS1Q9ULD2 1270 aa17.77■□□□□ 0.44
SHOX-201ENST00000334060 NRP1O14786 923 aa17.77■□□□□ 0.43
SHOX-201ENST00000334060 ASS1P00966 412 aaKnown RBP17.77■□□□□ 0.43
SHOX-201ENST00000334060 NOP14P78316 857 aaKnown RBP17.77■□□□□ 0.43
SHOX-201ENST00000334060 HTRA4P83105 476 aaPredicted RBP17.77■□□□□ 0.43
SHOX-201ENST00000334060 TAS1R1Q7RTX1 841 aa17.77■□□□□ 0.43
SHOX-201ENST00000334060 TMC6Q7Z403 805 aa17.77■□□□□ 0.43
SHOX-201ENST00000334060 VSTM4Q8IW00 320 aa17.77■□□□□ 0.43
SHOX-201ENST00000334060 ERGIC2Q96RQ1 377 aa17.77■□□□□ 0.43
SHOX-201ENST00000334060 ZBED2Q9BTP6 218 aa17.77■□□□□ 0.43
SHOX-201ENST00000334060 NLRC4Q9NPP4 1024 aa17.77■□□□□ 0.43
SHOX-201ENST00000334060 DERAQ9Y315 318 aa17.77■□□□□ 0.43
SHOX-201ENST00000334060 GYPCP04921 128 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms