RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 TUBGCP4Q9UGJ1 667 aa25■■□□□ 1.59
TSEN54-201ENST00000333213 SMIM28A0A1B0GU29 152 aa24.99■■□□□ 1.59
TSEN54-201ENST00000333213 KRT19P08727 400 aa24.99■■□□□ 1.59
TSEN54-201ENST00000333213 FERP16591 822 aa24.99■■□□□ 1.59
TSEN54-201ENST00000333213 AFF1P51825 1210 aaKnown RBP24.99■■□□□ 1.59
TSEN54-201ENST00000333213 KIF11P52732 1056 aa24.99■■□□□ 1.59
TSEN54-201ENST00000333213 FAAP100Q0VG06 881 aa24.99■■□□□ 1.59
TSEN54-201ENST00000333213 TRPC3Q13507 836 aa24.99■■□□□ 1.59
TSEN54-201ENST00000333213 TRIM60Q495X7 471 aa24.99■■□□□ 1.59
TSEN54-201ENST00000333213 RTN4RL1Q86UN2 441 aaPredicted RBP24.99■■□□□ 1.59
TSEN54-201ENST00000333213 GSTCDQ8NEC7 633 aa24.99■■□□□ 1.59
TSEN54-201ENST00000333213 LPPQ93052 612 aa24.99■■□□□ 1.59
TSEN54-201ENST00000333213 ZFP42Q96MM3 310 aa24.99■■□□□ 1.59
TSEN54-201ENST00000333213 ADAM2Q99965 735 aa24.99■■□□□ 1.59
TSEN54-201ENST00000333213 DPP3Q9NY33 737 aa24.99■■□□□ 1.59
TSEN54-201ENST00000333213 DERAQ9Y315 318 aa24.99■■□□□ 1.59
TSEN54-201ENST00000333213 NBNO60934 754 aa24.98■■□□□ 1.59
TSEN54-201ENST00000333213 ATF7P17544 494 aaPredicted RBP24.98■■□□□ 1.59
TSEN54-201ENST00000333213 CYP27A1Q02318 531 aa24.98■■□□□ 1.59
TSEN54-201ENST00000333213 CUL2Q13617 745 aa24.98■■□□□ 1.59
TSEN54-201ENST00000333213 KIF18AQ8NI77 898 aa24.98■■□□□ 1.59
TSEN54-201ENST00000333213 SYT11Q9BT88 431 aa24.98■■□□□ 1.59
TSEN54-201ENST00000333213 IFIH1Q9BYX4 1025 aaKnown RBP24.98■■□□□ 1.59
TSEN54-201ENST00000333213 EIF3CLB5ME19 914 aaKnown RBP24.98■■□□□ 1.59
TSEN54-201ENST00000333213 PTGESO14684 152 aa24.98■■□□□ 1.59
TSEN54-201ENST00000333213 KCNE1P15382 129 aa24.98■■□□□ 1.59
TSEN54-201ENST00000333213 ACO1P21399 889 aaKnown RBP24.98■■□□□ 1.59
TSEN54-201ENST00000333213 POLR2BP30876 1174 aaKnown RBP24.98■■□□□ 1.59
TSEN54-201ENST00000333213 GFPT1Q06210 699 aaPredicted RBP24.98■■□□□ 1.59
TSEN54-201ENST00000333213 DMTNQ08495 405 aa24.98■■□□□ 1.59
TSEN54-201ENST00000333213 AGMOQ6ZNB7 445 aa24.98■■□□□ 1.59
TSEN54-201ENST00000333213 EIF3CQ99613 913 aaKnown RBP24.98■■□□□ 1.59
TSEN54-201ENST00000333213 TFR2Q9UP52 801 aa24.98■■□□□ 1.59
TSEN54-201ENST00000333213 A0A0U1RQF3 1178 aa24.97■■□□□ 1.59
TSEN54-201ENST00000333213 ZNF623O75123 536 aa24.97■■□□□ 1.59
TSEN54-201ENST00000333213 LCA5LO95447 670 aa24.97■■□□□ 1.59
TSEN54-201ENST00000333213 ABL1P00519 1130 aa24.97■■□□□ 1.59
TSEN54-201ENST00000333213 CCDC175P0C221 793 aa24.97■■□□□ 1.59
TSEN54-201ENST00000333213 CYLC1P35663 651 aaPredicted RBP24.97■■□□□ 1.59
TSEN54-201ENST00000333213 TLE2Q04725 743 aa24.97■■□□□ 1.59
TSEN54-201ENST00000333213 BFSP2Q13515 415 aa24.97■■□□□ 1.59
TSEN54-201ENST00000333213 C1orf53Q5VUE5 145 aa24.97■■□□□ 1.59
TSEN54-201ENST00000333213 ENOSF1Q7L5Y1 443 aa24.97■■□□□ 1.59
TSEN54-201ENST00000333213 MRPL10Q7Z7H8 261 aaKnown RBP24.97■■□□□ 1.59
TSEN54-201ENST00000333213 LINC01599Q8WXQ3 324 aa24.97■■□□□ 1.59
TSEN54-201ENST00000333213 IMPG2Q9BZV3 1241 aa24.97■■□□□ 1.59
TSEN54-201ENST00000333213 OGFRQ9NZT2 677 aa24.97■■□□□ 1.59
TSEN54-201ENST00000333213 ADAMTS1Q9UHI8 967 aa24.97■■□□□ 1.59
TSEN54-201ENST00000333213 PRDM4Q9UKN5 801 aa24.97■■□□□ 1.59
TSEN54-201ENST00000333213 KIAA0100Q14667 2235 aaKnown RBP24.97■■□□□ 1.59
TSEN54-201ENST00000333213 PDCD11Q14690 1871 aaKnown RBP24.97■■□□□ 1.59
TSEN54-201ENST00000333213 A0A087X0T9 212 aa24.96■■□□□ 1.59
TSEN54-201ENST00000333213 PITPNM1O00562 1244 aa24.96■■□□□ 1.59
TSEN54-201ENST00000333213 CYP26A1O43174 497 aa24.96■■□□□ 1.59
TSEN54-201ENST00000333213 CCP110O43303 1012 aa24.96■■□□□ 1.59
TSEN54-201ENST00000333213 FAM228BP0C875 321 aa24.96■■□□□ 1.59
TSEN54-201ENST00000333213 USP8P40818 1118 aa24.96■■□□□ 1.59
TSEN54-201ENST00000333213 ZNF699Q32M78 642 aa24.96■■□□□ 1.59
TSEN54-201ENST00000333213 DEF6Q9H4E7 631 aa24.96■■□□□ 1.59
TSEN54-201ENST00000333213 ITGA11Q9UKX5 1188 aa24.96■■□□□ 1.59
TSEN54-201ENST00000333213 AGAP1Q9UPQ3 857 aa24.96■■□□□ 1.59
TSEN54-201ENST00000333213 BZW2Q9Y6E2 419 aaKnown RBP24.96■■□□□ 1.59
TSEN54-201ENST00000333213 PPEF2O14830 753 aa24.96■■□□□ 1.59
TSEN54-201ENST00000333213 AKR1B10O60218 316 aa24.96■■□□□ 1.59
TSEN54-201ENST00000333213 ASPAP45381 313 aa24.96■■□□□ 1.59
TSEN54-201ENST00000333213 SOX4Q06945 474 aaPredicted RBP24.96■■□□□ 1.59
TSEN54-201ENST00000333213 PAWRQ96IZ0 340 aaKnown RBP24.96■■□□□ 1.59
TSEN54-201ENST00000333213 POLIQ9UNA4 740 aa24.96■■□□□ 1.59
TSEN54-201ENST00000333213 ITGA4P13612 1032 aa24.95■■□□□ 1.58
TSEN54-201ENST00000333213 SLC47A2Q86VL8 602 aa24.95■■□□□ 1.58
TSEN54-201ENST00000333213 UBR7Q8N806 425 aa24.95■■□□□ 1.58
TSEN54-201ENST00000333213 TOX2Q96NM4 488 aa24.95■■□□□ 1.58
TSEN54-201ENST00000333213 MIOSQ9NXC5 875 aa24.95■■□□□ 1.58
TSEN54-201ENST00000333213 RCCD1A6NED2 376 aa24.94■■□□□ 1.58
TSEN54-201ENST00000333213 CALCAP01258 141 aa24.94■■□□□ 1.58
TSEN54-201ENST00000333213 MLH1P40692 756 aa24.94■■□□□ 1.58
TSEN54-201ENST00000333213 ANKLE1Q8NAG6 615 aa24.94■■□□□ 1.58
TSEN54-201ENST00000333213 FAM81BQ96LP2 452 aa24.94■■□□□ 1.58
TSEN54-201ENST00000333213 GAD1Q99259 594 aa24.94■■□□□ 1.58
TSEN54-201ENST00000333213 NIF3L1Q9GZT8 377 aa24.94■■□□□ 1.58
TSEN54-201ENST00000333213 VRTNQ9H8Y1 702 aa24.94■■□□□ 1.58
TSEN54-201ENST00000333213 GOLGA2P5Q9HBQ8 144 aa24.94■■□□□ 1.58
TSEN54-201ENST00000333213 TLR3O15455 904 aaKnown RBP24.94■■□□□ 1.58
TSEN54-201ENST00000333213 ZSCAN12O43309 604 aa24.94■■□□□ 1.58
TSEN54-201ENST00000333213 CLSTN1O94985 981 aa24.94■■□□□ 1.58
TSEN54-201ENST00000333213 TBXAS1P24557 533 aaPredicted RBP24.94■■□□□ 1.58
TSEN54-201ENST00000333213 SLC18A3Q16572 532 aa24.94■■□□□ 1.58
TSEN54-201ENST00000333213 WDR72Q3MJ13 1102 aa24.94■■□□□ 1.58
TSEN54-201ENST00000333213 LNX1Q8TBB1 728 aaPredicted RBP24.94■■□□□ 1.58
TSEN54-201ENST00000333213 EPS8L1Q8TE68 723 aa24.94■■□□□ 1.58
TSEN54-201ENST00000333213 SLC20A1Q8WUM9 679 aa24.94■■□□□ 1.58
TSEN54-201ENST00000333213 WNT8AQ9H1J5 351 aa24.94■■□□□ 1.58
TSEN54-201ENST00000333213 RGS18Q9NS28 235 aa24.94■■□□□ 1.58
TSEN54-201ENST00000333213 NXF1Q9UBU9 619 aaKnown RBP24.94■■□□□ 1.58
TSEN54-201ENST00000333213 UBQLN1Q9UMX0 589 aaKnown RBP24.94■■□□□ 1.58
TSEN54-201ENST00000333213 DDX3XO00571 662 aaKnown RBP eCLIP24.93■■□□□ 1.582e-7■■■■■ 38.7
TSEN54-201ENST00000333213 RBP5P82980 135 aa24.93■■□□□ 1.58
TSEN54-201ENST00000333213 NOP9Q86U38 636 aaKnown RBP24.93■■□□□ 1.58
TSEN54-201ENST00000333213 TAF4BQ92750 862 aa24.93■■□□□ 1.58
TSEN54-201ENST00000333213 JAKMIP2Q96AA8 810 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms