RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 SLCO1B3Q9NPD5 702 aa15.5■□□□□ 0.07
SSBP3-201ENST00000326956 SPATS2LQ9NUQ6 558 aaKnown RBP15.5■□□□□ 0.07
SSBP3-201ENST00000326956 SENP1Q9P0U3 644 aa15.5■□□□□ 0.07
SSBP3-201ENST00000326956 CHKBQ9Y259 395 aa15.5■□□□□ 0.07
SSBP3-201ENST00000326956 NEU2Q9Y3R4 380 aa15.5■□□□□ 0.07
SSBP3-201ENST00000326956 ASMTLO95671 621 aa15.49■□□□□ 0.07
SSBP3-201ENST00000326956 TSNAXIP1Q2TAA8 658 aa15.49■□□□□ 0.07
SSBP3-201ENST00000326956 HP1BP3Q5SSJ5 553 aaPredicted RBP15.49■□□□□ 0.07
SSBP3-201ENST00000326956 MIS18BP1Q6P0N0 1132 aa15.49■□□□□ 0.07
SSBP3-201ENST00000326956 ZCCHC9Q8N567 271 aaKnown RBP15.49■□□□□ 0.07
SSBP3-201ENST00000326956 STK32AQ8WU08 396 aa15.49■□□□□ 0.07
SSBP3-201ENST00000326956 DDX1Q92499 740 aaKnown RBP15.49■□□□□ 0.07
SSBP3-201ENST00000326956 CSRNP1Q96S65 589 aa15.49■□□□□ 0.07
SSBP3-201ENST00000326956 KIAA1683Q9H0B3 1180 aa15.49■□□□□ 0.07
SSBP3-201ENST00000326956 GPRC5CQ9NQ84 441 aa15.49■□□□□ 0.07
SSBP3-201ENST00000326956 USP20Q9Y2K6 914 aa15.49■□□□□ 0.07
SSBP3-201ENST00000326956 MROH7Q68CQ1 1323 aa15.49■□□□□ 0.07
SSBP3-201ENST00000326956 BTAF1O14981 1849 aa15.49■□□□□ 0.07
SSBP3-201ENST00000326956 H0Y3Z8 333 aa15.49■□□□□ 0.07
SSBP3-201ENST00000326956 PROSCO94903 275 aa15.49■□□□□ 0.07
SSBP3-201ENST00000326956 CD58P19256 250 aa15.49■□□□□ 0.07
SSBP3-201ENST00000326956 CCNG1P51959 295 aa15.49■□□□□ 0.07
SSBP3-201ENST00000326956 VPS72Q15906 364 aa15.49■□□□□ 0.07
SSBP3-201ENST00000326956 ZYXQ15942 572 aaKnown RBP15.49■□□□□ 0.07
SSBP3-201ENST00000326956 AOC3Q16853 763 aa15.49■□□□□ 0.07
SSBP3-201ENST00000326956 DAB2IPQ5VWQ8 1189 aa15.49■□□□□ 0.07
SSBP3-201ENST00000326956 KAZNQ674X7 775 aa15.49■□□□□ 0.07
SSBP3-201ENST00000326956 ENOSF1Q7L5Y1 443 aa15.49■□□□□ 0.07
SSBP3-201ENST00000326956 PODNQ7Z5L7 613 aa15.49■□□□□ 0.07
SSBP3-201ENST00000326956 POMGNT1Q8WZA1 660 aa15.49■□□□□ 0.07
SSBP3-201ENST00000326956 SPOCK2Q92563 424 aa15.49■□□□□ 0.07
SSBP3-201ENST00000326956 MAML1Q92585 1016 aa15.49■□□□□ 0.07
SSBP3-201ENST00000326956 UTP4Q969X6 686 aaKnown RBP15.49■□□□□ 0.07
SSBP3-201ENST00000326956 PI4K2AQ9BTU6 479 aa15.49■□□□□ 0.07
SSBP3-201ENST00000326956 YIPF3Q9GZM5 350 aa15.49■□□□□ 0.07
SSBP3-201ENST00000326956 KCNH7Q9NS40 1196 aa15.49■□□□□ 0.07
SSBP3-201ENST00000326956 CYP39A1Q9NYL5 469 aa15.49■□□□□ 0.07
SSBP3-201ENST00000326956 CNGA1P29973 690 aa15.48■□□□□ 0.07
SSBP3-201ENST00000326956 YWHABP31946 246 aaKnown RBP15.48■□□□□ 0.07
SSBP3-201ENST00000326956 XKR9Q5GH70 373 aa15.48■□□□□ 0.07
SSBP3-201ENST00000326956 KIF9Q9HAQ2 790 aa15.48■□□□□ 0.07
SSBP3-201ENST00000326956 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.48■□□□□ 0.07
SSBP3-201ENST00000326956 ZFATQ9P243 1243 aa15.48■□□□□ 0.07
SSBP3-201ENST00000326956 NKX1-2Q9UD57 310 aaPredicted RBP15.48■□□□□ 0.07
SSBP3-201ENST00000326956 COQ4Q9Y3A0 265 aa15.48■□□□□ 0.07
SSBP3-201ENST00000326956 E7ENQ6 273 aa15.48■□□□□ 0.07
SSBP3-201ENST00000326956 PSTPIP1O43586 416 aa15.48■□□□□ 0.07
SSBP3-201ENST00000326956 BPIFB4P59827 614 aa15.48■□□□□ 0.07
SSBP3-201ENST00000326956 JAG1P78504 1218 aa15.48■□□□□ 0.07
SSBP3-201ENST00000326956 CCDC6Q16204 474 aa15.48■□□□□ 0.07
SSBP3-201ENST00000326956 WDR44Q5JSH3 913 aa15.48■□□□□ 0.07
SSBP3-201ENST00000326956 PCNX4Q63HM2 1172 aa15.48■□□□□ 0.07
SSBP3-201ENST00000326956 SV2AQ7L0J3 742 aa15.48■□□□□ 0.07
SSBP3-201ENST00000326956 RELL1Q8IUW5 271 aa15.48■□□□□ 0.07
SSBP3-201ENST00000326956 ANKLE1Q8NAG6 615 aa15.48■□□□□ 0.07
SSBP3-201ENST00000326956 FAM13CQ8NE31 585 aa15.48■□□□□ 0.07
SSBP3-201ENST00000326956 TMEM174Q8WUU8 243 aa15.48■□□□□ 0.07
SSBP3-201ENST00000326956 TBC1D10AQ9BXI6 508 aa15.48■□□□□ 0.07
SSBP3-201ENST00000326956 TDRD3Q9H7E2 651 aaKnown RBP15.48■□□□□ 0.07
SSBP3-201ENST00000326956 KIAA1586Q9HCI6 787 aa15.48■□□□□ 0.07
SSBP3-201ENST00000326956 MRPL47Q9HD33 250 aaKnown RBP15.48■□□□□ 0.07
SSBP3-201ENST00000326956 ZFP69BQ9UJL9 534 aa15.48■□□□□ 0.07
SSBP3-201ENST00000326956 MAGEB2O15479 319 aa15.47■□□□□ 0.07
SSBP3-201ENST00000326956 MYCNP04198 464 aaPredicted RBP15.47■□□□□ 0.07
SSBP3-201ENST00000326956 ATF7P17544 494 aaPredicted RBP15.47■□□□□ 0.07
SSBP3-201ENST00000326956 DMP1Q13316 513 aaPredicted RBP15.47■□□□□ 0.07
SSBP3-201ENST00000326956 PKN2Q16513 984 aaKnown RBP15.47■□□□□ 0.07
SSBP3-201ENST00000326956 PDK4Q16654 411 aa15.47■□□□□ 0.07
SSBP3-201ENST00000326956 TMEM63BQ5T3F8 832 aa15.47■□□□□ 0.07
SSBP3-201ENST00000326956 LLGL2Q6P1M3 1020 aa15.47■□□□□ 0.07
SSBP3-201ENST00000326956 B3GNT9Q6UX72 402 aa15.47■□□□□ 0.07
SSBP3-201ENST00000326956 FBXO41Q8TF61 875 aa15.47■□□□□ 0.07
SSBP3-201ENST00000326956 C11orf70Q9BRQ4 267 aa15.47■□□□□ 0.07
SSBP3-201ENST00000326956 TBX20Q9UMR3 447 aa15.47■□□□□ 0.07
SSBP3-201ENST00000326956 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.47■□□□□ 0.07
SSBP3-201ENST00000326956 PCDHB2Q9Y5E7 798 aa15.47■□□□□ 0.07
SSBP3-201ENST00000326956 PRPF4O43172 522 aaKnown RBP eCLIP15.47■□□□□ 0.07
SSBP3-201ENST00000326956 GRIN3BO60391 1043 aa15.47■□□□□ 0.07
SSBP3-201ENST00000326956 EDF1O60869 148 aaKnown RBP15.47■□□□□ 0.07
SSBP3-201ENST00000326956 TROVE2P10155 538 aaKnown RBP eCLIP15.47■□□□□ 0.07
SSBP3-201ENST00000326956 EPHB2P29323 1055 aa15.47■□□□□ 0.07
SSBP3-201ENST00000326956 ACER1Q8TDN7 264 aa15.47■□□□□ 0.07
SSBP3-201ENST00000326956 DENND3A2RUS2 1198 aa15.47■□□□□ 0.07
SSBP3-201ENST00000326956 CBX6O95503 412 aa15.47■□□□□ 0.07
SSBP3-201ENST00000326956 UNGP13051 313 aaPredicted RBP15.47■□□□□ 0.07
SSBP3-201ENST00000326956 ITGB5P18084 799 aa15.47■□□□□ 0.07
SSBP3-201ENST00000326956 RPA3P35244 121 aaPredicted RBP15.47■□□□□ 0.07
SSBP3-201ENST00000326956 PLCB3Q01970 1234 aa15.47■□□□□ 0.07
SSBP3-201ENST00000326956 RNASELQ05823 741 aaKnown RBP15.47■□□□□ 0.07
SSBP3-201ENST00000326956 LDHDQ86WU2 507 aa15.47■□□□□ 0.07
SSBP3-201ENST00000326956 TMC2Q8TDI7 906 aa15.47■□□□□ 0.07
SSBP3-201ENST00000326956 BICD1Q96G01 975 aa15.47■□□□□ 0.07
SSBP3-201ENST00000326956 TIPINQ9BVW5 301 aa15.47■□□□□ 0.07
SSBP3-201ENST00000326956 ST6GALNAC4Q9H4F1 302 aa15.47■□□□□ 0.07
SSBP3-201ENST00000326956 TMEM150BA6NC51 233 aa15.46■□□□□ 0.07
SSBP3-201ENST00000326956 KIF3CO14782 793 aa15.46■□□□□ 0.07
SSBP3-201ENST00000326956 PEX11AO75192 247 aa15.46■□□□□ 0.07
SSBP3-201ENST00000326956 ARSEP51690 589 aa15.46■□□□□ 0.07
SSBP3-201ENST00000326956 GCNT1Q02742 428 aa15.46■□□□□ 0.07
SSBP3-201ENST00000326956 PTP4A2Q12974 167 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms