RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 GEMIN8Q9NWZ8 242 aaKnown RBP21.15■□□□□ 0.98
SOX2-201ENST00000325404 USP15Q9Y4E8 981 aaPredicted RBP21.15■□□□□ 0.98
SOX2-201ENST00000325404 EXTL3O43909 919 aa21.14■□□□□ 0.98
SOX2-201ENST00000325404 RRM1P23921 792 aa21.14■□□□□ 0.98
SOX2-201ENST00000325404 CHKAP35790 457 aa21.14■□□□□ 0.98
SOX2-201ENST00000325404 NSFP46459 744 aaKnown RBP21.14■□□□□ 0.98
SOX2-201ENST00000325404 RIPK1Q13546 671 aa21.14■□□□□ 0.98
SOX2-201ENST00000325404 WDR44Q5JSH3 913 aa21.14■□□□□ 0.98
SOX2-201ENST00000325404 LIN9Q5TKA1 542 aa21.14■□□□□ 0.98
SOX2-201ENST00000325404 NLRX1Q86UT6 975 aa21.14■□□□□ 0.98
SOX2-201ENST00000325404 VSIG10LQ86VR7 867 aa21.14■□□□□ 0.98
SOX2-201ENST00000325404 RHOT1Q8IXI2 618 aa21.14■□□□□ 0.98
SOX2-201ENST00000325404 CKAP2Q8WWK9 683 aa21.14■□□□□ 0.98
SOX2-201ENST00000325404 C12orf42Q96LP6 360 aa21.14■□□□□ 0.98
SOX2-201ENST00000325404 SYT17Q9BSW7 474 aa21.14■□□□□ 0.98
SOX2-201ENST00000325404 KIFC3Q9BVG8 833 aa21.14■□□□□ 0.98
SOX2-201ENST00000325404 MRPL47Q9HD33 250 aaKnown RBP21.14■□□□□ 0.98
SOX2-201ENST00000325404 ARHGAP28Q9P2N2 729 aa21.14■□□□□ 0.98
SOX2-201ENST00000325404 SSC5DA1L4H1 1573 aa21.14■□□□□ 0.97
SOX2-201ENST00000325404 TMEM120BA0PK00 339 aa21.14■□□□□ 0.97
SOX2-201ENST00000325404 C19orf81C9J6K1 198 aa21.14■□□□□ 0.97
SOX2-201ENST00000325404 O00370 1275 aa21.14■□□□□ 0.97
SOX2-201ENST00000325404 ACSL3O95573 720 aa21.14■□□□□ 0.97
SOX2-201ENST00000325404 HMGCS2P54868 508 aa21.14■□□□□ 0.97
SOX2-201ENST00000325404 ZACNQ401N2 412 aa21.14■□□□□ 0.97
SOX2-201ENST00000325404 NOL9Q5SY16 702 aaKnown RBP21.14■□□□□ 0.97
SOX2-201ENST00000325404 CEP170P1Q96L14 293 aa21.14■□□□□ 0.97
SOX2-201ENST00000325404 CD248Q9HCU0 757 aa21.14■□□□□ 0.97
SOX2-201ENST00000325404 HOMER2Q9NSB8 354 aa21.14■□□□□ 0.97
SOX2-201ENST00000325404 STYXL1Q9Y6J8 313 aa21.14■□□□□ 0.97
SOX2-201ENST00000325404 HNRNPDLO14979 420 aaKnown RBP21.13■□□□□ 0.97
SOX2-201ENST00000325404 CCND2P30279 289 aa21.13■□□□□ 0.97
SOX2-201ENST00000325404 ELF3P78545 371 aaPredicted RBP21.13■□□□□ 0.97
SOX2-201ENST00000325404 SNX1Q13596 522 aa21.13■□□□□ 0.97
SOX2-201ENST00000325404 ARHGEF16Q5VV41 709 aa21.13■□□□□ 0.97
SOX2-201ENST00000325404 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.13■□□□□ 0.97
SOX2-201ENST00000325404 SCLT1Q96NL6 688 aa21.13■□□□□ 0.97
SOX2-201ENST00000325404 CCDC77Q9BR77 488 aa21.13■□□□□ 0.97
SOX2-201ENST00000325404 CCDC113Q9H0I3 377 aa21.13■□□□□ 0.97
SOX2-201ENST00000325404 TPX2Q9ULW0 747 aaKnown RBP21.13■□□□□ 0.97
SOX2-201ENST00000325404 SUN1O94901 812 aa21.13■□□□□ 0.97
SOX2-201ENST00000325404 ABHD2P08910 425 aa21.13■□□□□ 0.97
SOX2-201ENST00000325404 LMNB2Q03252 620 aa21.13■□□□□ 0.97
SOX2-201ENST00000325404 STAT4Q14765 748 aa21.13■□□□□ 0.97
SOX2-201ENST00000325404 RIBC1Q8N443 379 aaPredicted RBP21.13■□□□□ 0.97
SOX2-201ENST00000325404 EXD1Q8NHP7 514 aa21.13■□□□□ 0.97
SOX2-201ENST00000325404 DYDC1Q8WWB3 177 aa21.13■□□□□ 0.97
SOX2-201ENST00000325404 NINJ2Q9NZG7 142 aa21.13■□□□□ 0.97
SOX2-201ENST00000325404 UMODL1Q5DID0 1318 aa21.13■□□□□ 0.97
SOX2-201ENST00000325404 VWA5AO00534 786 aa21.12■□□□□ 0.97
SOX2-201ENST00000325404 THAP12O43422 761 aa21.12■□□□□ 0.97
SOX2-201ENST00000325404 CDH16O75309 829 aa21.12■□□□□ 0.97
SOX2-201ENST00000325404 ADCY8P40145 1251 aa21.12■□□□□ 0.97
SOX2-201ENST00000325404 SMYD5Q6GMV2 418 aa21.12■□□□□ 0.97
SOX2-201ENST00000325404 CCDC63Q8NA47 563 aa21.12■□□□□ 0.97
SOX2-201ENST00000325404 CCHCR1Q8TD31 782 aa21.12■□□□□ 0.97
SOX2-201ENST00000325404 ZNF516Q92618 1163 aa21.12■□□□□ 0.97
SOX2-201ENST00000325404 ATG4CQ96DT6 458 aa21.12■□□□□ 0.97
SOX2-201ENST00000325404 FAM212AQ96EL1 285 aa21.12■□□□□ 0.97
SOX2-201ENST00000325404 IFT74Q96LB3 600 aa21.12■□□□□ 0.97
SOX2-201ENST00000325404 CNTN6Q9UQ52 1028 aa21.12■□□□□ 0.97
SOX2-201ENST00000325404 ADGRA3Q8IWK6 1321 aa21.12■□□□□ 0.97
SOX2-201ENST00000325404 NFASCO94856 1347 aa21.12■□□□□ 0.97
SOX2-201ENST00000325404 C4BPAP04003 597 aaKnown RBP21.12■□□□□ 0.97
SOX2-201ENST00000325404 IFNAR2P48551 515 aa21.12■□□□□ 0.97
SOX2-201ENST00000325404 GALNTL6Q49A17 601 aa21.12■□□□□ 0.97
SOX2-201ENST00000325404 PHF13Q86YI8 300 aaPredicted RBP21.12■□□□□ 0.97
SOX2-201ENST00000325404 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.12■□□□□ 0.97
SOX2-201ENST00000325404 HERPUD2Q9BSE4 406 aa21.12■□□□□ 0.97
SOX2-201ENST00000325404 SCINQ9Y6U3 715 aa21.12■□□□□ 0.97
SOX2-201ENST00000325404 ZNF862O60290 1169 aa21.11■□□□□ 0.97
SOX2-201ENST00000325404 PSAPP07602 524 aa21.11■□□□□ 0.97
SOX2-201ENST00000325404 PRKG1Q13976 671 aa21.11■□□□□ 0.97
SOX2-201ENST00000325404 KYNUQ16719 465 aa21.11■□□□□ 0.97
SOX2-201ENST00000325404 CCDC38Q502W7 563 aa21.11■□□□□ 0.97
SOX2-201ENST00000325404 PLEKHA7Q6IQ23 1121 aa21.11■□□□□ 0.97
SOX2-201ENST00000325404 CHADLQ6NUI6 762 aa21.11■□□□□ 0.97
SOX2-201ENST00000325404 CRELD2Q6UXH1 353 aaPredicted RBP21.11■□□□□ 0.97
SOX2-201ENST00000325404 FAM228AQ86W67 206 aa21.11■□□□□ 0.97
SOX2-201ENST00000325404 CPA5Q8WXQ8 436 aa21.11■□□□□ 0.97
SOX2-201ENST00000325404 ATG4AQ8WYN0 398 aa21.11■□□□□ 0.97
SOX2-201ENST00000325404 MYCBPQ99417 103 aaPredicted RBP21.11■□□□□ 0.97
SOX2-201ENST00000325404 FAM213AQ9BRX8 229 aa21.11■□□□□ 0.97
SOX2-201ENST00000325404 GABBR1Q9UBS5 961 aa21.11■□□□□ 0.97
SOX2-201ENST00000325404 TESPA1A2RU30 521 aaPredicted RBP21.11■□□□□ 0.97
SOX2-201ENST00000325404 GJB6O95452 261 aa21.11■□□□□ 0.97
SOX2-201ENST00000325404 ACO1P21399 889 aaKnown RBP21.11■□□□□ 0.97
SOX2-201ENST00000325404 ZNF365Q70YC5 407 aa21.11■□□□□ 0.97
SOX2-201ENST00000325404 ILDR2Q71H61 639 aa21.11■□□□□ 0.97
SOX2-201ENST00000325404 TAS1R3Q7RTX0 852 aa21.11■□□□□ 0.97
SOX2-201ENST00000325404 DCPSQ96C86 337 aaKnown RBP21.11■□□□□ 0.97
SOX2-201ENST00000325404 PI4K2AQ9BTU6 479 aa21.11■□□□□ 0.97
SOX2-201ENST00000325404 TRIM7Q9C029 511 aa21.11■□□□□ 0.97
SOX2-201ENST00000325404 ATP6V0A4Q9HBG4 840 aa21.11■□□□□ 0.97
SOX2-201ENST00000325404 ATP2C2O75185 946 aa21.1■□□□□ 0.97
SOX2-201ENST00000325404 HLA-DRAP01903 254 aa21.1■□□□□ 0.97
SOX2-201ENST00000325404 RALAP11233 206 aa21.1■□□□□ 0.97
SOX2-201ENST00000325404 MAP2K2P36507 400 aa21.1■□□□□ 0.97
SOX2-201ENST00000325404 C1QBPQ07021 282 aaKnown RBP21.1■□□□□ 0.97
SOX2-201ENST00000325404 DRICH1Q6PGQ1 229 aaPredicted RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms