RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 ZNF623O75123 536 aa19.4■□□□□ 0.7
SYNE4-201ENST00000324444 IPO7O95373 1038 aaKnown RBP19.4■□□□□ 0.7
SYNE4-201ENST00000324444 HLA-DRAP01903 254 aa19.4■□□□□ 0.7
SYNE4-201ENST00000324444 CXCL10P02778 98 aa19.4■□□□□ 0.7
SYNE4-201ENST00000324444 ANXA13P27216 316 aa19.4■□□□□ 0.7
SYNE4-201ENST00000324444 ATICP31939 592 aa19.4■□□□□ 0.7
SYNE4-201ENST00000324444 CYLC1P35663 651 aaPredicted RBP19.4■□□□□ 0.7
SYNE4-201ENST00000324444 GCNT1Q02742 428 aa19.4■□□□□ 0.7
SYNE4-201ENST00000324444 LRMPQ12912 555 aa19.4■□□□□ 0.7
SYNE4-201ENST00000324444 NCOA4Q13772 614 aa19.4■□□□□ 0.7
SYNE4-201ENST00000324444 UBXN11Q5T124 520 aa19.4■□□□□ 0.7
SYNE4-201ENST00000324444 TDRD10Q5VZ19 366 aaKnown RBP19.4■□□□□ 0.7
SYNE4-201ENST00000324444 BEST2Q8NFU1 509 aa19.4■□□□□ 0.7
SYNE4-201ENST00000324444 TAS1R2Q8TE23 839 aa19.4■□□□□ 0.7
SYNE4-201ENST00000324444 SNX27Q96L92 541 aa19.4■□□□□ 0.7
SYNE4-201ENST00000324444 SLC9A7Q96T83 725 aa19.4■□□□□ 0.7
SYNE4-201ENST00000324444 EIF2AQ9BY44 585 aaKnown RBP19.4■□□□□ 0.7
SYNE4-201ENST00000324444 FAM105AQ9NUU6 356 aa19.4■□□□□ 0.7
SYNE4-201ENST00000324444 SNTG2Q9NY99 539 aa19.4■□□□□ 0.7
SYNE4-201ENST00000324444 ITGA11Q9UKX5 1188 aa19.4■□□□□ 0.7
SYNE4-201ENST00000324444 RALGAPA2Q2PPJ7 1873 aa19.4■□□□□ 0.7
SYNE4-201ENST00000324444 RBAK-RBAKDNI3L0D1 243 aa19.39■□□□□ 0.69
SYNE4-201ENST00000324444 EPHB6O15197 1021 aa19.39■□□□□ 0.69
SYNE4-201ENST00000324444 SERPING1P05155 500 aa19.39■□□□□ 0.69
SYNE4-201ENST00000324444 CD52P31358 61 aa19.39■□□□□ 0.69
SYNE4-201ENST00000324444 RAPGEF1Q13905 1077 aa19.39■□□□□ 0.69
SYNE4-201ENST00000324444 ASIC2Q16515 512 aa19.39■□□□□ 0.69
SYNE4-201ENST00000324444 PPP2R2DQ66LE6 453 aa19.39■□□□□ 0.69
SYNE4-201ENST00000324444 IQCEQ6IPM2 695 aa19.39■□□□□ 0.69
SYNE4-201ENST00000324444 DPY19L2P1Q6NXN4 242 aa19.39■□□□□ 0.69
SYNE4-201ENST00000324444 CNKSR3Q6P9H4 555 aa19.39■□□□□ 0.69
SYNE4-201ENST00000324444 VPS36Q86VN1 386 aa19.39■□□□□ 0.69
SYNE4-201ENST00000324444 TXLNBQ8N3L3 684 aa19.39■□□□□ 0.69
SYNE4-201ENST00000324444 APBB2Q92870 758 aa19.39■□□□□ 0.69
SYNE4-201ENST00000324444 FAM124BQ9H5Z6 455 aaPredicted RBP19.39■□□□□ 0.69
SYNE4-201ENST00000324444 UBE2TQ9NPD8 197 aaPredicted RBP19.39■□□□□ 0.69
SYNE4-201ENST00000324444 CNTN3Q9P232 1028 aa19.39■□□□□ 0.69
SYNE4-201ENST00000324444 IPPQ9Y573 584 aa19.39■□□□□ 0.69
SYNE4-201ENST00000324444 PCDHB2Q9Y5E7 798 aa19.39■□□□□ 0.69
SYNE4-201ENST00000324444 FHOD1Q9Y613 1164 aa19.39■□□□□ 0.69
SYNE4-201ENST00000324444 SSU72P8A0A1W2PR75 194 aa19.38■□□□□ 0.69
SYNE4-201ENST00000324444 ESPNB1AK53 854 aa19.38■□□□□ 0.69
SYNE4-201ENST00000324444 ZSCAN12O43309 604 aa19.38■□□□□ 0.69
SYNE4-201ENST00000324444 ITGA4P13612 1032 aa19.38■□□□□ 0.69
SYNE4-201ENST00000324444 P4HA1P13674 534 aa19.38■□□□□ 0.69
SYNE4-201ENST00000324444 KCNE1P15382 129 aa19.38■□□□□ 0.69
SYNE4-201ENST00000324444 JAM2P57087 298 aa19.38■□□□□ 0.69
SYNE4-201ENST00000324444 YWHAEP62258 255 aaKnown RBP19.38■□□□□ 0.69
SYNE4-201ENST00000324444 DSC3Q14574 896 aa19.38■□□□□ 0.69
SYNE4-201ENST00000324444 XKR4Q5GH76 650 aa19.38■□□□□ 0.69
SYNE4-201ENST00000324444 JADE1Q6IE81 842 aa19.38■□□□□ 0.69
SYNE4-201ENST00000324444 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.38■□□□□ 0.69
SYNE4-201ENST00000324444 PPM1KQ8N3J5 372 aa19.38■□□□□ 0.69
SYNE4-201ENST00000324444 OR5B17Q8NGF7 314 aa19.38■□□□□ 0.69
SYNE4-201ENST00000324444 PHOSPHO2Q8TCD6 241 aa19.38■□□□□ 0.69
SYNE4-201ENST00000324444 KIF12Q96FN5 646 aa19.38■□□□□ 0.69
SYNE4-201ENST00000324444 CCDC42Q96M95 316 aa19.38■□□□□ 0.69
SYNE4-201ENST00000324444 GAS2L1Q99501 681 aaPredicted RBP19.38■□□□□ 0.69
SYNE4-201ENST00000324444 MTMR12Q9C0I1 747 aa19.38■□□□□ 0.69
SYNE4-201ENST00000324444 SLC38A7Q9NVC3 462 aa19.38■□□□□ 0.69
SYNE4-201ENST00000324444 PARP2Q9UGN5 583 aa19.38■□□□□ 0.69
SYNE4-201ENST00000324444 UBQLN1Q9UMX0 589 aaKnown RBP19.38■□□□□ 0.69
SYNE4-201ENST00000324444 GIT1Q9Y2X7 761 aa19.38■□□□□ 0.69
SYNE4-201ENST00000324444 CUL9Q8IWT3 2517 aa19.38■□□□□ 0.69
SYNE4-201ENST00000324444 CITO14578 2027 aa19.38■□□□□ 0.69
SYNE4-201ENST00000324444 A0A0U1RQF3 1178 aa19.37■□□□□ 0.69
SYNE4-201ENST00000324444 RNF225M0QZC1 329 aaPredicted RBP19.37■□□□□ 0.69
SYNE4-201ENST00000324444 EFCAB14O75071 495 aa19.37■□□□□ 0.69
SYNE4-201ENST00000324444 RECQL4O94761 1208 aa19.37■□□□□ 0.69
SYNE4-201ENST00000324444 STAU1O95793 577 aaKnown RBP19.37■□□□□ 0.69
SYNE4-201ENST00000324444 CA3P07451 260 aa19.37■□□□□ 0.69
SYNE4-201ENST00000324444 CYP3A5P20815 502 aa19.37■□□□□ 0.69
SYNE4-201ENST00000324444 SOX5P35711 763 aa19.37■□□□□ 0.69
SYNE4-201ENST00000324444 WDR5P61964 334 aaKnown RBP19.37■□□□□ 0.69
SYNE4-201ENST00000324444 RBP5P82980 135 aa19.37■□□□□ 0.69
SYNE4-201ENST00000324444 DRAP1Q14919 205 aaPredicted RBP19.37■□□□□ 0.69
SYNE4-201ENST00000324444 TCTN1Q2MV58 587 aa19.37■□□□□ 0.69
SYNE4-201ENST00000324444 LMBRD2Q68DH5 695 aaPredicted RBP19.37■□□□□ 0.69
SYNE4-201ENST00000324444 PHLDB3Q6NSJ2 640 aa19.37■□□□□ 0.69
SYNE4-201ENST00000324444 ALKAL1Q6UXT8 129 aa19.37■□□□□ 0.69
SYNE4-201ENST00000324444 MRPL10Q7Z7H8 261 aaKnown RBP19.37■□□□□ 0.69
SYNE4-201ENST00000324444 TMEM139Q8IV31 216 aa19.37■□□□□ 0.69
SYNE4-201ENST00000324444 HERC6Q8IVU3 1022 aa19.37■□□□□ 0.69
SYNE4-201ENST00000324444 TMEM192Q8IY95 271 aa19.37■□□□□ 0.69
SYNE4-201ENST00000324444 KIAA1524Q8TCG1 905 aa19.37■□□□□ 0.69
SYNE4-201ENST00000324444 SEMA4DQ92854 862 aa19.37■□□□□ 0.69
SYNE4-201ENST00000324444 IFIH1Q9BYX4 1025 aaKnown RBP19.37■□□□□ 0.69
SYNE4-201ENST00000324444 NXF3Q9H4D5 531 aaKnown RBP19.37■□□□□ 0.69
SYNE4-201ENST00000324444 DEF6Q9H4E7 631 aa19.37■□□□□ 0.69
SYNE4-201ENST00000324444 LUC7LQ9NQ29 371 aaKnown RBP19.37■□□□□ 0.69
SYNE4-201ENST00000324444 PTPRJQ12913 1337 aa19.36■□□□□ 0.69
SYNE4-201ENST00000324444 GOLGA6L9A6NEM1 432 aa19.36■□□□□ 0.69
SYNE4-201ENST00000324444 F8VZ95 297 aa19.36■□□□□ 0.69
SYNE4-201ENST00000324444 GFPT2O94808 682 aa19.36■□□□□ 0.69
SYNE4-201ENST00000324444 ASS1P00966 412 aaKnown RBP19.36■□□□□ 0.69
SYNE4-201ENST00000324444 ATF7P17544 494 aaPredicted RBP19.36■□□□□ 0.69
SYNE4-201ENST00000324444 PRKCIP41743 596 aa19.36■□□□□ 0.69
SYNE4-201ENST00000324444 WNT7BP56706 349 aa19.36■□□□□ 0.69
SYNE4-201ENST00000324444 KRT83P78385 493 aa19.36■□□□□ 0.69
SYNE4-201ENST00000324444 GOLGA8FQ08AF8 430 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms