RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 FLNCQ14315 2725 aa7.44□□□□□ -1.22
CSTF3-201ENST00000323959 WDFY3Q8IZQ1 3526 aa7.44□□□□□ -1.22
CSTF3-201ENST00000323959 ANO9A1A5B4 782 aa7.43□□□□□ -1.22
CSTF3-201ENST00000323959 SLC27A2O14975 620 aa7.43□□□□□ -1.22
CSTF3-201ENST00000323959 DDHD2O94830 711 aa7.43□□□□□ -1.22
CSTF3-201ENST00000323959 GNAT2P19087 354 aa7.43□□□□□ -1.22
CSTF3-201ENST00000323959 KLRC1P26715 233 aa7.43□□□□□ -1.22
CSTF3-201ENST00000323959 WEE1P30291 646 aa7.43□□□□□ -1.22
CSTF3-201ENST00000323959 CDC37Q16543 378 aaPredicted RBP7.43□□□□□ -1.22
CSTF3-201ENST00000323959 CREB3L3Q68CJ9 461 aa7.43□□□□□ -1.22
CSTF3-201ENST00000323959 RUFY3Q7L099 469 aa7.43□□□□□ -1.22
CSTF3-201ENST00000323959 ARMCX6Q7L4S7 300 aa7.43□□□□□ -1.22
CSTF3-201ENST00000323959 FNBP1Q96RU3 617 aa7.43□□□□□ -1.22
CSTF3-201ENST00000323959 UBN1Q9NPG3 1134 aa7.43□□□□□ -1.22
CSTF3-201ENST00000323959 INPP5FQ9Y2H2 1132 aa7.43□□□□□ -1.22
CSTF3-201ENST00000323959 MYO16Q9Y6X6 1858 aa7.43□□□□□ -1.22
CSTF3-201ENST00000323959 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.43□□□□□ -1.22
CSTF3-201ENST00000323959 WIPF3A6NGB9 483 aa7.43□□□□□ -1.22
CSTF3-201ENST00000323959 HBP1O60381 514 aa7.43□□□□□ -1.22
CSTF3-201ENST00000323959 RECQL4O94761 1208 aa7.43□□□□□ -1.22
CSTF3-201ENST00000323959 SNHG28P0DPA3 235 aa7.43□□□□□ -1.22
CSTF3-201ENST00000323959 GNSP15586 552 aa7.43□□□□□ -1.22
CSTF3-201ENST00000323959 CASRP41180 1078 aa7.43□□□□□ -1.22
CSTF3-201ENST00000323959 PI4KAP42356 2102 aa7.43□□□□□ -1.22
CSTF3-201ENST00000323959 TRAF1Q13077 416 aa7.43□□□□□ -1.22
CSTF3-201ENST00000323959 NAA30Q147X3 362 aaPredicted RBP7.43□□□□□ -1.22
CSTF3-201ENST00000323959 CWC27Q6UX04 472 aaKnown RBP7.43□□□□□ -1.22
CSTF3-201ENST00000323959 DHRS13Q6UX07 377 aa7.43□□□□□ -1.22
CSTF3-201ENST00000323959 MAMDC2Q7Z304 686 aaPredicted RBP7.43□□□□□ -1.22
CSTF3-201ENST00000323959 RHBDD1Q8TEB9 315 aa7.43□□□□□ -1.22
CSTF3-201ENST00000323959 ZBTB10Q96DT7 871 aa7.43□□□□□ -1.22
CSTF3-201ENST00000323959 CCDC97Q96F63 343 aaPredicted RBP7.43□□□□□ -1.22
CSTF3-201ENST00000323959 PHTF1Q9UMS5 762 aa7.43□□□□□ -1.22
CSTF3-201ENST00000323959 RBM8AQ9Y5S9 174 aaKnown RBP7.43□□□□□ -1.22
CSTF3-201ENST00000323959 HELZP42694 1942 aaKnown RBP7.43□□□□□ -1.22
CSTF3-201ENST00000323959 ITPR2Q14571 2701 aa7.43□□□□□ -1.22
CSTF3-201ENST00000323959 A0A087X0B3 334 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 LUC7L3O95232 432 aaKnown RBP7.42□□□□□ -1.22
CSTF3-201ENST00000323959 PCP11498 1178 aaKnown RBP7.42□□□□□ -1.22
CSTF3-201ENST00000323959 EIF4BP23588 611 aaKnown RBP7.42□□□□□ -1.22
CSTF3-201ENST00000323959 MAP7D1Q3KQU3 841 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 KIAA1614Q5VZ46 1190 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 COLGALT2Q8IYK4 626 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 ZNF564Q8TBZ8 553 aaPredicted RBP7.42□□□□□ -1.22
CSTF3-201ENST00000323959 PKNOX2Q96KN3 472 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 FAM227BQ96M60 508 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 TPSD1Q9BZJ3 242 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 F8P00451 2351 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 CEP192Q8TEP8 1941 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 SETD2Q9BYW2 2564 aaPredicted RBP7.42□□□□□ -1.22
CSTF3-201ENST00000323959 EGFP01133 1207 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 PDHBP11177 359 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 ITGB5P18084 799 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 VASPP50552 380 aaPredicted RBP7.42□□□□□ -1.22
CSTF3-201ENST00000323959 NUCB2P80303 420 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 GRIK2Q13002 908 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 PLEKHG6Q3KR16 790 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 FUT10Q6P4F1 479 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 PDZD4Q76G19 769 aaPredicted RBP7.42□□□□□ -1.22
CSTF3-201ENST00000323959 MRPL10Q7Z7H8 261 aaKnown RBP7.42□□□□□ -1.22
CSTF3-201ENST00000323959 RPLP0P6Q8NHW5 317 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 SPATA3Q8NHX4 192 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 ZSCAN18Q8TBC5 510 aaPredicted RBP7.42□□□□□ -1.22
CSTF3-201ENST00000323959 EPN3Q9H201 632 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 ADNPQ9H2P0 1102 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 ANAPC2Q9UJX6 822 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 CACNA1DQ01668 2161 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 NBPF19A0A087WUL8 3843 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 GOLGA8CPA6NN73 597 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 PRDM1O75626 825 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 CD2BP2O95400 341 aaKnown RBP7.42□□□□□ -1.22
CSTF3-201ENST00000323959 VIPR2P41587 438 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 GRK6P43250 576 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 RCAN1P53805 252 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 EPHA5P54756 1037 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 HSF5Q4G112 596 aaPredicted RBP7.42□□□□□ -1.22
CSTF3-201ENST00000323959 FHL5Q5TD97 284 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 MMP21Q8N119 569 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 TRAPPC12Q8WVT3 735 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 GPRASP2Q96D09 838 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 ARHGAP9Q9BRR9 750 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 KDM4CQ9H3R0 1056 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 ANAPC4Q9UJX5 808 aa7.42□□□□□ -1.22
CSTF3-201ENST00000323959 ABCA7Q8IZY2 2146 aa7.41□□□□□ -1.22
CSTF3-201ENST00000323959 GSG1L2A8MUP6 293 aa7.41□□□□□ -1.22
CSTF3-201ENST00000323959 FOXP2O15409 715 aa7.41□□□□□ -1.22
CSTF3-201ENST00000323959 AGFG2O95081 481 aa7.41□□□□□ -1.22
CSTF3-201ENST00000323959 KRT10P13645 584 aa7.41□□□□□ -1.22
CSTF3-201ENST00000323959 DARSP14868 501 aaKnown RBP7.41□□□□□ -1.22
CSTF3-201ENST00000323959 RPS6KB1P23443 525 aa7.41□□□□□ -1.22
CSTF3-201ENST00000323959 SREBF1P36956 1147 aa7.41□□□□□ -1.22
CSTF3-201ENST00000323959 MATKP42679 507 aa7.41□□□□□ -1.22
CSTF3-201ENST00000323959 DSC1Q08554 894 aa7.41□□□□□ -1.22
CSTF3-201ENST00000323959 TARDBPQ13148 414 aaKnown RBP eCLIP7.41□□□□□ -1.224e-19■■■■■ 36.8
CSTF3-201ENST00000323959 CYP4A22Q5TCH4 519 aa7.41□□□□□ -1.22
CSTF3-201ENST00000323959 ZNF589Q86UQ0 364 aaPredicted RBP7.41□□□□□ -1.22
CSTF3-201ENST00000323959 TM7SF3Q9NS93 570 aa7.41□□□□□ -1.22
CSTF3-201ENST00000323959 NCANO14594 1321 aa7.41□□□□□ -1.22
CSTF3-201ENST00000323959 GOLIM4O00461 696 aa7.41□□□□□ -1.22
CSTF3-201ENST00000323959 KLK10O43240 276 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms