RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 FAM13AO94988 1023 aa13.46□□□□□ -0.25
TPM3-204ENST00000323144 LRG1P02750 347 aa13.46□□□□□ -0.25
TPM3-204ENST00000323144 NFICP08651 508 aa13.46□□□□□ -0.25
TPM3-204ENST00000323144 OR4Q2P0C623 313 aa13.46□□□□□ -0.25
TPM3-204ENST00000323144 FCARP24071 287 aa13.46□□□□□ -0.25
TPM3-204ENST00000323144 NMT1P30419 496 aaKnown RBP13.46□□□□□ -0.25
TPM3-204ENST00000323144 CCR2P41597 374 aa13.46□□□□□ -0.25
TPM3-204ENST00000323144 MCM2P49736 904 aa13.46□□□□□ -0.25
TPM3-204ENST00000323144 SMTNP53814 917 aa13.46□□□□□ -0.25
TPM3-204ENST00000323144 GPC5P78333 572 aa13.46□□□□□ -0.25
TPM3-204ENST00000323144 PPP2R3AQ06190 1150 aa13.46□□□□□ -0.25
TPM3-204ENST00000323144 MRPL58Q14197 206 aaKnown RBP13.46□□□□□ -0.25
TPM3-204ENST00000323144 PRSS36Q5K4E3 855 aa13.46□□□□□ -0.25
TPM3-204ENST00000323144 LARP1BQ659C4 914 aaKnown RBP13.46□□□□□ -0.25
TPM3-204ENST00000323144 FAM173BQ6P4H8 233 aa13.46□□□□□ -0.25
TPM3-204ENST00000323144 USP49Q70CQ1 688 aa13.46□□□□□ -0.25
TPM3-204ENST00000323144 MTSS1LQ765P7 747 aa13.46□□□□□ -0.25
TPM3-204ENST00000323144 BRAPQ7Z569 592 aa13.46□□□□□ -0.25
TPM3-204ENST00000323144 PJA1Q8NG27 643 aa13.46□□□□□ -0.25
TPM3-204ENST00000323144 RASSF8Q8NHQ8 419 aa13.46□□□□□ -0.25
TPM3-204ENST00000323144 DDX12PQ92771 950 aa13.46□□□□□ -0.25
TPM3-204ENST00000323144 NXPE3Q969Y0 559 aa13.46□□□□□ -0.25
TPM3-204ENST00000323144 CALML4Q96GE6 196 aa13.46□□□□□ -0.25
TPM3-204ENST00000323144 RTP3Q9BQQ7 232 aa13.46□□□□□ -0.25
TPM3-204ENST00000323144 CYP4F11Q9HBI6 524 aa13.46□□□□□ -0.25
TPM3-204ENST00000323144 DLGAP2Q9P1A6 1054 aa13.46□□□□□ -0.25
TPM3-204ENST00000323144 LARSQ9P2J5 1176 aaKnown RBP13.46□□□□□ -0.25
TPM3-204ENST00000323144 TBX20Q9UMR3 447 aa13.46□□□□□ -0.25
TPM3-204ENST00000323144 PCDHB8Q9UN66 801 aa13.46□□□□□ -0.25
TPM3-204ENST00000323144 MRPS23Q9Y3D9 190 aaKnown RBP13.46□□□□□ -0.25
TPM3-204ENST00000323144 YIPF1Q9Y548 306 aa13.46□□□□□ -0.25
TPM3-204ENST00000323144 TIMM13Q9Y5L4 95 aaPredicted RBP13.46□□□□□ -0.25
TPM3-204ENST00000323144 CLIC4Q9Y696 253 aa13.46□□□□□ -0.25
TPM3-204ENST00000323144 ZFP37Q9Y6Q3 630 aaPredicted RBP13.46□□□□□ -0.25
TPM3-204ENST00000323144 DENND4CQ5VZ89 1909 aa13.46□□□□□ -0.25
TPM3-204ENST00000323144 ZFHX2Q9C0A1 2572 aaPredicted RBP13.46□□□□□ -0.26
TPM3-204ENST00000323144 TBCAO75347 108 aaKnown RBP13.45□□□□□ -0.26
TPM3-204ENST00000323144 ABLIM3O94929 683 aa13.45□□□□□ -0.26
TPM3-204ENST00000323144 PIGRP01833 764 aa13.45□□□□□ -0.26
TPM3-204ENST00000323144 CLTAP09496 248 aa13.45□□□□□ -0.26
TPM3-204ENST00000323144 CPB1P15086 417 aa13.45□□□□□ -0.26
TPM3-204ENST00000323144 RPL9P32969 192 aaKnown RBP13.45□□□□□ -0.26
TPM3-204ENST00000323144 UBA7P41226 1012 aa13.45□□□□□ -0.26
TPM3-204ENST00000323144 RESTQ13127 1097 aa13.45□□□□□ -0.26
TPM3-204ENST00000323144 CUL4AQ13619 759 aa13.45□□□□□ -0.26
TPM3-204ENST00000323144 RNF19BQ6ZMZ0 732 aa13.45□□□□□ -0.26
TPM3-204ENST00000323144 SFR1Q86XK3 245 aa13.45□□□□□ -0.26
TPM3-204ENST00000323144 MAP4K3Q8IVH8 894 aa13.45□□□□□ -0.26
TPM3-204ENST00000323144 HS6ST3Q8IZP7 471 aa13.45□□□□□ -0.26
TPM3-204ENST00000323144 TTC9BQ8N6N2 239 aa13.45□□□□□ -0.26
TPM3-204ENST00000323144 ZNF461Q8TAF7 563 aa13.45□□□□□ -0.26
TPM3-204ENST00000323144 LARP4BQ92615 738 aaKnown RBP13.45□□□□□ -0.26
TPM3-204ENST00000323144 KCNN1Q92952 543 aa13.45□□□□□ -0.26
TPM3-204ENST00000323144 MCRS1Q96EZ8 462 aa13.45□□□□□ -0.26
TPM3-204ENST00000323144 CORO1BQ9BR76 489 aa13.45□□□□□ -0.26
TPM3-204ENST00000323144 PLA2G2FQ9BZM2 168 aa13.45□□□□□ -0.26
TPM3-204ENST00000323144 IRF2BPLQ9H1B7 796 aa13.45□□□□□ -0.26
TPM3-204ENST00000323144 CRISPLD1Q9H336 500 aa13.45□□□□□ -0.26
TPM3-204ENST00000323144 ZHX3Q9H4I2 956 aa13.45□□□□□ -0.26
TPM3-204ENST00000323144 PARVGQ9HBI0 331 aa13.45□□□□□ -0.26
TPM3-204ENST00000323144 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.45□□□□□ -0.26
TPM3-204ENST00000323144 LACTBL1A8MY62 500 aa13.44□□□□□ -0.26
TPM3-204ENST00000323144 H7C4K7 107 aa13.44□□□□□ -0.26
TPM3-204ENST00000323144 OGTO15294 1046 aa13.44□□□□□ -0.26
TPM3-204ENST00000323144 SLC26A4O43511 780 aa13.44□□□□□ -0.26
TPM3-204ENST00000323144 KRT18P05783 430 aaKnown RBP13.44□□□□□ -0.26
TPM3-204ENST00000323144 ATF2P15336 505 aa13.44□□□□□ -0.26
TPM3-204ENST00000323144 GJA1P17302 382 aa13.44□□□□□ -0.26
TPM3-204ENST00000323144 LRPAP1P30533 357 aa13.44□□□□□ -0.26
TPM3-204ENST00000323144 LONP1P36776 959 aaKnown RBP13.44□□□□□ -0.26
TPM3-204ENST00000323144 AARSP49588 968 aaKnown RBP eCLIP13.44□□□□□ -0.26
TPM3-204ENST00000323144 ADCY1Q08828 1119 aa13.44□□□□□ -0.26
TPM3-204ENST00000323144 TWF1Q12792 350 aa13.44□□□□□ -0.26
TPM3-204ENST00000323144 SNW1Q13573 536 aaKnown RBP13.44□□□□□ -0.26
TPM3-204ENST00000323144 GRM2Q14416 872 aa13.44□□□□□ -0.26
TPM3-204ENST00000323144 PTPAQ15257 358 aa13.44□□□□□ -0.26
TPM3-204ENST00000323144 MLF2Q15773 248 aaPredicted RBP13.44□□□□□ -0.26
TPM3-204ENST00000323144 UVSSAQ2YD98 709 aa13.44□□□□□ -0.26
TPM3-204ENST00000323144 ZC2HC1CQ53FD0 456 aaPredicted RBP13.44□□□□□ -0.26
TPM3-204ENST00000323144 JADE1Q6IE81 842 aa13.44□□□□□ -0.26
TPM3-204ENST00000323144 TCEAL8Q8IYN2 117 aa13.44□□□□□ -0.26
TPM3-204ENST00000323144 MYCT1Q8N699 235 aa13.44□□□□□ -0.26
TPM3-204ENST00000323144 EPSTI1Q96J88 318 aa13.44□□□□□ -0.26
TPM3-204ENST00000323144 PGLYRP2Q96PD5 576 aa13.44□□□□□ -0.26
TPM3-204ENST00000323144 TMEM209Q96SK2 561 aa13.44□□□□□ -0.26
TPM3-204ENST00000323144 MSTO1Q9BUK6 570 aa13.44□□□□□ -0.26
TPM3-204ENST00000323144 CEP72Q9P209 647 aa13.44□□□□□ -0.26
TPM3-204ENST00000323144 FBXO2Q9UK22 296 aaPredicted RBP13.44□□□□□ -0.26
TPM3-204ENST00000323144 KCNH3Q9ULD8 1083 aa13.44□□□□□ -0.26
TPM3-204ENST00000323144 UBQLN1Q9UMX0 589 aaKnown RBP13.44□□□□□ -0.26
TPM3-204ENST00000323144 R4GN57 208 aa13.44□□□□□ -0.26
TPM3-204ENST00000323144 HELZP42694 1942 aaKnown RBP13.43□□□□□ -0.26
TPM3-204ENST00000323144 A0A0B4J269 797 aa13.43□□□□□ -0.26
TPM3-204ENST00000323144 ANKRD63C9JTQ0 380 aa13.43□□□□□ -0.26
TPM3-204ENST00000323144 H0YCG3 227 aa13.43□□□□□ -0.26
TPM3-204ENST00000323144 M0QZQ0 153 aa13.43□□□□□ -0.26
TPM3-204ENST00000323144 TRAK2O60296 914 aa13.43□□□□□ -0.26
TPM3-204ENST00000323144 MOSPD3O75425 235 aa13.43□□□□□ -0.26
TPM3-204ENST00000323144 CD72P21854 359 aa13.43□□□□□ -0.26
TPM3-204ENST00000323144 MARCKSP29966 332 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms