RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 CHST7Q9NS84 486 aa8.42□□□□□ -1.06
RTL3-201ENST00000321110 NDUFA13Q9P0J0 144 aa8.42□□□□□ -1.06
RTL3-201ENST00000321110 BTBD7Q9P203 1132 aa8.42□□□□□ -1.06
RTL3-201ENST00000321110 SMG5Q9UPR3 1016 aaKnown RBP8.42□□□□□ -1.06
RTL3-201ENST00000321110 ZNF711Q9Y462 761 aa8.42□□□□□ -1.06
RTL3-201ENST00000321110 ARAP2Q8WZ64 1704 aa8.42□□□□□ -1.06
RTL3-201ENST00000321110 TNS2Q63HR2 1409 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 A0A1W2PPM1 405 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 TRIM43BA6NCK2 446 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 MAGEC1O60732 1142 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 DNAJC6O75061 913 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 STK10O94804 968 aaKnown RBP8.41□□□□□ -1.06
RTL3-201ENST00000321110 UQCRBP14927 111 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 ADRA1DP25100 572 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 MLH1P40692 756 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 AQP4P55087 323 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 ACTR3P61158 418 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 AP2B1P63010 937 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 DCTN2Q13561 401 aaKnown RBP8.41□□□□□ -1.06
RTL3-201ENST00000321110 PTK6Q13882 451 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 KRT72Q14CN4 511 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 UGT2A3Q6UWM9 527 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 ISLR2Q6UXK2 745 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 PPP4R3CPQ6ZMV5 832 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 NET1Q7Z628 596 aaPredicted RBP8.41□□□□□ -1.06
RTL3-201ENST00000321110 RHOT2Q8IXI1 618 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 CCDC65Q8IXS2 484 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 METTL25Q8N6Q8 603 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.41□□□□□ -1.06
RTL3-201ENST00000321110 ARL10Q8N8L6 244 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 CEP70Q8NHQ1 597 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 RIN3Q8TB24 985 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 TTC25Q96NG3 672 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 PFDN4Q9NQP4 134 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 ARMCX1Q9P291 453 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 ANAPC5Q9UJX4 755 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 FRMPD4Q14CM0 1322 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 SHANK3Q9BYB0 1731 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 EXOC1LA0A1B0GW35 172 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 B2RBV5 119 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 TPD52L2O43399 206 aaKnown RBP8.41□□□□□ -1.06
RTL3-201ENST00000321110 SORBS3O60504 671 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 VCLP18206 1134 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 TNFAIP3P21580 790 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 RRM1P23921 792 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 CDK16Q00536 496 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 PDK3Q15120 406 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 EAPPQ56P03 285 aaPredicted RBP8.41□□□□□ -1.06
RTL3-201ENST00000321110 LPCAT4Q643R3 524 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 SPTY2D1Q68D10 685 aaPredicted RBP8.41□□□□□ -1.06
RTL3-201ENST00000321110 LRRC8BQ6P9F7 803 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 FBXL19Q6PCT2 694 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 C1orf228Q6PIY5 440 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 TREML1Q86YW5 311 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 FNDC8Q8TC99 324 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 BTBD6Q96KE9 485 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 AGAP3Q96P47 875 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 TMEM120AQ9BXJ8 343 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 STK33Q9BYT3 514 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 OSBPL8Q9BZF1 889 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 C12orf65Q9H3J6 166 aaKnown RBP8.41□□□□□ -1.06
RTL3-201ENST00000321110 ZHX3Q9H4I2 956 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 DNAJB4Q9UDY4 337 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 SLC7A8Q9UHI5 535 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 DNAJC12Q9UKB3 198 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 PLA2G4CQ9UP65 541 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 TRAF3IP3Q9Y228 551 aa8.41□□□□□ -1.06
RTL3-201ENST00000321110 LRP5O75197 1615 aa8.4□□□□□ -1.06
RTL3-201ENST00000321110 LTBP4Q8N2S1 1624 aa8.4□□□□□ -1.06
RTL3-201ENST00000321110 POC1B-GALNT4F8VUJ3 575 aa8.4□□□□□ -1.06
RTL3-201ENST00000321110 H3BRJ5 948 aa8.4□□□□□ -1.06
RTL3-201ENST00000321110 IDO1P14902 403 aa8.4□□□□□ -1.06
RTL3-201ENST00000321110 ATF2P15336 505 aa8.4□□□□□ -1.06
RTL3-201ENST00000321110 KRT15P19012 456 aa8.4□□□□□ -1.06
RTL3-201ENST00000321110 HOXD12P35452 270 aa8.4□□□□□ -1.06
RTL3-201ENST00000321110 CHN2P52757 468 aa8.4□□□□□ -1.06
RTL3-201ENST00000321110 ARFIP2P53365 341 aa8.4□□□□□ -1.06
RTL3-201ENST00000321110 TFAP4Q01664 338 aa8.4□□□□□ -1.06
RTL3-201ENST00000321110 ZBTB16Q05516 673 aa8.4□□□□□ -1.06
RTL3-201ENST00000321110 ASPHQ12797 758 aa8.4□□□□□ -1.06
RTL3-201ENST00000321110 TRMT5Q32P41 509 aaKnown RBP8.4□□□□□ -1.06
RTL3-201ENST00000321110 KBTBD12Q3ZCT8 623 aa8.4□□□□□ -1.06
RTL3-201ENST00000321110 NADK2Q4G0N4 442 aa8.4□□□□□ -1.06
RTL3-201ENST00000321110 SGO2Q562F6 1265 aa8.4□□□□□ -1.06
RTL3-201ENST00000321110 CCDC62Q6P9F0 684 aa8.4□□□□□ -1.06
RTL3-201ENST00000321110 GPBP1Q86WP2 473 aa8.4□□□□□ -1.06
RTL3-201ENST00000321110 ULK2Q8IYT8 1036 aa8.4□□□□□ -1.06
RTL3-201ENST00000321110 ZBED8Q8IZ13 594 aa8.4□□□□□ -1.06
RTL3-201ENST00000321110 ARHGAP24Q8N264 748 aa8.4□□□□□ -1.06
RTL3-201ENST00000321110 RBM15BQ8NDT2 890 aaKnown RBP8.4□□□□□ -1.06
RTL3-201ENST00000321110 SLC20A1Q8WUM9 679 aa8.4□□□□□ -1.06
RTL3-201ENST00000321110 RSPH1Q8WYR4 309 aa8.4□□□□□ -1.06
RTL3-201ENST00000321110 HERPUD2Q9BSE4 406 aa8.4□□□□□ -1.06
RTL3-201ENST00000321110 TRAIPQ9BWF2 469 aa8.4□□□□□ -1.06
RTL3-201ENST00000321110 MAK16Q9BXY0 300 aaKnown RBP8.4□□□□□ -1.06
RTL3-201ENST00000321110 DCP1AQ9NPI6 582 aaPredicted RBP8.4□□□□□ -1.06
RTL3-201ENST00000321110 TIMMDC1Q9NPL8 285 aa8.4□□□□□ -1.06
RTL3-201ENST00000321110 BMP2KQ9NSY1 1161 aaPredicted RBP8.4□□□□□ -1.06
RTL3-201ENST00000321110 FAIMQ9NVQ4 179 aa8.4□□□□□ -1.06
RTL3-201ENST00000321110 ZNF180Q9UJW8 692 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms