RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 SLC5A4Q9NY91 659 aa17.41■□□□□ 0.38
CLIP4-201ENST00000320081 IL1RL1Q01638 556 aa17.41■□□□□ 0.38
CLIP4-201ENST00000320081 PTGISQ16647 500 aa17.41■□□□□ 0.38
CLIP4-201ENST00000320081 C3orf62Q6ZUJ4 267 aa17.41■□□□□ 0.38
CLIP4-201ENST00000320081 ARHGEF19Q8IW93 802 aa17.41■□□□□ 0.38
CLIP4-201ENST00000320081 ABI1Q8IZP0 508 aa17.41■□□□□ 0.38
CLIP4-201ENST00000320081 DYNC1LI2O43237 492 aaPredicted RBP17.41■□□□□ 0.38
CLIP4-201ENST00000320081 CYP11B1P15538 503 aa17.41■□□□□ 0.38
CLIP4-201ENST00000320081 JADE1Q6IE81 842 aa17.41■□□□□ 0.38
CLIP4-201ENST00000320081 MYCBPAPQ8TBZ2 947 aa17.41■□□□□ 0.38
CLIP4-201ENST00000320081 SPATA18Q8TC71 538 aa17.41■□□□□ 0.38
CLIP4-201ENST00000320081 CD248Q9HCU0 757 aa17.41■□□□□ 0.38
CLIP4-201ENST00000320081 GPATCH2LQ9NWQ4 482 aa17.41■□□□□ 0.38
CLIP4-201ENST00000320081 KLK14Q9P0G3 267 aa17.41■□□□□ 0.38
CLIP4-201ENST00000320081 CXCL9Q07325 125 aa17.4■□□□□ 0.38
CLIP4-201ENST00000320081 HEATR6Q6AI08 1181 aaKnown RBP17.4■□□□□ 0.38
CLIP4-201ENST00000320081 LRRC10BA6NIK2 292 aa17.4■□□□□ 0.38
CLIP4-201ENST00000320081 HUS1O60921 280 aa17.4■□□□□ 0.38
CLIP4-201ENST00000320081 COILP38432 576 aaPredicted RBP17.4■□□□□ 0.38
CLIP4-201ENST00000320081 GARSP41250 739 aaKnown RBP17.4■□□□□ 0.38
CLIP4-201ENST00000320081 SPATA21Q7Z572 469 aa17.4■□□□□ 0.38
CLIP4-201ENST00000320081 POLR3CQ9BUI4 534 aaPredicted RBP17.4■□□□□ 0.38
CLIP4-201ENST00000320081 BCAS3Q9H6U6 928 aa17.4■□□□□ 0.38
CLIP4-201ENST00000320081 SRGAP2BP0DMP2 458 aa17.4■□□□□ 0.38
CLIP4-201ENST00000320081 MIIPQ5JXC2 388 aa17.4■□□□□ 0.38
CLIP4-201ENST00000320081 PRUNE1Q86TP1 453 aa17.4■□□□□ 0.38
CLIP4-201ENST00000320081 TRAPPC12Q8WVT3 735 aa17.4■□□□□ 0.38
CLIP4-201ENST00000320081 YIPF3Q9GZM5 350 aa17.4■□□□□ 0.38
CLIP4-201ENST00000320081 CARD9Q9H257 536 aa17.4■□□□□ 0.38
CLIP4-201ENST00000320081 TMEM8AQ9HCN3 771 aa17.4■□□□□ 0.38
CLIP4-201ENST00000320081 UBN1Q9NPG3 1134 aa17.4■□□□□ 0.38
CLIP4-201ENST00000320081 PIH1D1Q9NWS0 290 aaKnown RBP17.4■□□□□ 0.38
CLIP4-201ENST00000320081 SPDYE2BA6NHP3 402 aa17.39■□□□□ 0.38
CLIP4-201ENST00000320081 HSPA4LO95757 839 aa17.39■□□□□ 0.38
CLIP4-201ENST00000320081 SPDYE6P0CI01 402 aa17.39■□□□□ 0.38
CLIP4-201ENST00000320081 ARFIP2P53365 341 aa17.39■□□□□ 0.38
CLIP4-201ENST00000320081 ROR1Q01973 937 aa17.39■□□□□ 0.38
CLIP4-201ENST00000320081 TTLL4Q14679 1199 aa17.39■□□□□ 0.38
CLIP4-201ENST00000320081 SEPT1Q8WYJ6 367 aa17.39■□□□□ 0.38
CLIP4-201ENST00000320081 UVRAGQ9P2Y5 699 aa17.39■□□□□ 0.38
CLIP4-201ENST00000320081 PIN4Q9Y237 131 aaKnown RBP17.39■□□□□ 0.38
CLIP4-201ENST00000320081 XPOTO43592 962 aaKnown RBP17.39■□□□□ 0.37
CLIP4-201ENST00000320081 CDH16O75309 829 aa17.39■□□□□ 0.37
CLIP4-201ENST00000320081 OATP04181 439 aa17.39■□□□□ 0.37
CLIP4-201ENST00000320081 KRT7P08729 469 aa17.39■□□□□ 0.37
CLIP4-201ENST00000320081 HSPA9P38646 679 aaKnown RBP17.39■□□□□ 0.37
CLIP4-201ENST00000320081 MAGEA4P43358 317 aa17.39■□□□□ 0.37
CLIP4-201ENST00000320081 CRLF3Q8IUI8 442 aa17.39■□□□□ 0.37
CLIP4-201ENST00000320081 NUDCD3Q8IVD9 361 aa17.39■□□□□ 0.37
CLIP4-201ENST00000320081 PARP9Q8IXQ6 854 aa17.39■□□□□ 0.37
CLIP4-201ENST00000320081 MIPOL1Q8TD10 442 aa17.39■□□□□ 0.37
CLIP4-201ENST00000320081 CCHCR1Q8TD31 782 aa17.39■□□□□ 0.37
CLIP4-201ENST00000320081 MMP19Q99542 508 aa17.39■□□□□ 0.37
CLIP4-201ENST00000320081 ZSWIM1Q9BR11 485 aa17.39■□□□□ 0.37
CLIP4-201ENST00000320081 TMEM121Q9BTD3 319 aa17.39■□□□□ 0.37
CLIP4-201ENST00000320081 TRAIPQ9BWF2 469 aa17.39■□□□□ 0.37
CLIP4-201ENST00000320081 HAUS5O94927 633 aa17.39■□□□□ 0.37
CLIP4-201ENST00000320081 SMARCA1P28370 1054 aa17.39■□□□□ 0.37
CLIP4-201ENST00000320081 RAP1GAPP47736 663 aa17.39■□□□□ 0.37
CLIP4-201ENST00000320081 KCNMA1Q12791 1236 aa17.39■□□□□ 0.37
CLIP4-201ENST00000320081 SEMA3FQ13275 785 aa17.39■□□□□ 0.37
CLIP4-201ENST00000320081 DBN1Q16643 649 aa17.39■□□□□ 0.37
CLIP4-201ENST00000320081 TMEM139Q8IV31 216 aa17.39■□□□□ 0.37
CLIP4-201ENST00000320081 RAPGEF5Q92565 580 aa17.39■□□□□ 0.37
CLIP4-201ENST00000320081 MED15Q96RN5 788 aa17.39■□□□□ 0.37
CLIP4-201ENST00000320081 IL1R1P14778 569 aa17.38■□□□□ 0.37
CLIP4-201ENST00000320081 COG7P83436 770 aa17.38■□□□□ 0.37
CLIP4-201ENST00000320081 THOC5Q13769 683 aaKnown RBP17.38■□□□□ 0.37
CLIP4-201ENST00000320081 FIGNQ5HY92 759 aa17.38■□□□□ 0.37
CLIP4-201ENST00000320081 ATP11CQ8NB49 1132 aa17.38■□□□□ 0.37
CLIP4-201ENST00000320081 ATP6V1E2Q96A05 226 aa17.38■□□□□ 0.37
CLIP4-201ENST00000320081 SENP7Q9BQF6 1050 aa17.38■□□□□ 0.37
CLIP4-201ENST00000320081 SIK3Q9Y2K2 1263 aa17.38■□□□□ 0.37
CLIP4-201ENST00000320081 LOC100653049A0A140TA62 436 aa17.38■□□□□ 0.37
CLIP4-201ENST00000320081 KRT34O76011 436 aa17.38■□□□□ 0.37
CLIP4-201ENST00000320081 RARRES1P49788 294 aa17.38■□□□□ 0.37
CLIP4-201ENST00000320081 PDE1CQ14123 709 aaPredicted RBP17.38■□□□□ 0.37
CLIP4-201ENST00000320081 MEI1Q5TIA1 1274 aa17.38■□□□□ 0.37
CLIP4-201ENST00000320081 AFAP1L2Q8N4X5 818 aa17.38■□□□□ 0.37
CLIP4-201ENST00000320081 NEMP1O14524 444 aa17.38■□□□□ 0.37
CLIP4-201ENST00000320081 MX2P20592 715 aa17.38■□□□□ 0.37
CLIP4-201ENST00000320081 TYK2P29597 1187 aa17.38■□□□□ 0.37
CLIP4-201ENST00000320081 MARCKSL1P49006 195 aa17.38■□□□□ 0.37
CLIP4-201ENST00000320081 IFI35P80217 286 aaPredicted RBP17.38■□□□□ 0.37
CLIP4-201ENST00000320081 RNF139Q8WU17 664 aa17.38■□□□□ 0.37
CLIP4-201ENST00000320081 LPAR1Q92633 364 aa17.38■□□□□ 0.37
CLIP4-201ENST00000320081 SPDL1Q96EA4 605 aa17.38■□□□□ 0.37
CLIP4-201ENST00000320081 MTMR9Q96QG7 549 aa17.38■□□□□ 0.37
CLIP4-201ENST00000320081 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.38■□□□□ 0.37
CLIP4-201ENST00000320081 PYGMP11217 842 aa17.38■□□□□ 0.37
CLIP4-201ENST00000320081 RAD23BP54727 409 aa17.38■□□□□ 0.37
CLIP4-201ENST00000320081 SURF1Q15526 300 aa17.38■□□□□ 0.37
CLIP4-201ENST00000320081 LLGL2Q6P1M3 1020 aa17.38■□□□□ 0.37
CLIP4-201ENST00000320081 ARMCX2Q7L311 632 aa17.38■□□□□ 0.37
CLIP4-201ENST00000320081 OTOP1Q7RTM1 612 aa17.38■□□□□ 0.37
CLIP4-201ENST00000320081 ZNF507Q8TCN5 953 aa17.38■□□□□ 0.37
CLIP4-201ENST00000320081 MKNK1Q9BUB5 465 aa17.38■□□□□ 0.37
CLIP4-201ENST00000320081 HSD3B7Q9H2F3 369 aa17.38■□□□□ 0.37
CLIP4-201ENST00000320081 WDR70Q9NW82 654 aa17.38■□□□□ 0.37
CLIP4-201ENST00000320081 NOP53Q9NZM5 478 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms