RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 PODNQ7Z5L7 613 aa14.27□□□□□ -0.12
SKA3-202ENST00000314759 CCDC89Q8N998 374 aa14.27□□□□□ -0.12
SKA3-202ENST00000314759 RAB3IPQ96QF0 476 aaPredicted RBP14.27□□□□□ -0.12
SKA3-202ENST00000314759 RBM15Q96T37 977 aaKnown RBP eCLIP14.27□□□□□ -0.12
SKA3-202ENST00000314759 MOV10L1Q9BXT6 1211 aaKnown RBP14.27□□□□□ -0.12
SKA3-202ENST00000314759 TDRD3Q9H7E2 651 aaKnown RBP14.27□□□□□ -0.12
SKA3-202ENST00000314759 PIDD1Q9HB75 910 aa14.27□□□□□ -0.12
SKA3-202ENST00000314759 SLCO1B3Q9NPD5 702 aa14.27□□□□□ -0.12
SKA3-202ENST00000314759 TXLNGQ9NUQ3 528 aa14.27□□□□□ -0.12
SKA3-202ENST00000314759 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.27□□□□□ -0.12
SKA3-202ENST00000314759 MRPL11Q9Y3B7 192 aaKnown RBP14.27□□□□□ -0.12
SKA3-202ENST00000314759 GSTTP1A0A1W2PQM5 241 aa14.27□□□□□ -0.13
SKA3-202ENST00000314759 MAGEB2O15479 319 aa14.27□□□□□ -0.13
SKA3-202ENST00000314759 WFS1O76024 890 aa14.27□□□□□ -0.13
SKA3-202ENST00000314759 LUC7L3O95232 432 aaKnown RBP14.27□□□□□ -0.13
SKA3-202ENST00000314759 FDX1P10109 184 aa14.27□□□□□ -0.13
SKA3-202ENST00000314759 SLC1A1P43005 524 aa14.27□□□□□ -0.13
SKA3-202ENST00000314759 MAGEA4P43358 317 aa14.27□□□□□ -0.13
SKA3-202ENST00000314759 POLGP54098 1239 aaPredicted RBP14.27□□□□□ -0.13
SKA3-202ENST00000314759 CCNG2Q16589 344 aa14.27□□□□□ -0.13
SKA3-202ENST00000314759 ANKS1BQ7Z6G8 1248 aa14.27□□□□□ -0.13
SKA3-202ENST00000314759 PI4K2AQ9BTU6 479 aa14.27□□□□□ -0.13
SKA3-202ENST00000314759 LRMDAQ9H2I8 198 aa14.27□□□□□ -0.13
SKA3-202ENST00000314759 HAO1Q9UJM8 370 aa14.27□□□□□ -0.13
SKA3-202ENST00000314759 PHTF1Q9UMS5 762 aa14.27□□□□□ -0.13
SKA3-202ENST00000314759 KLHL33A6NCF5 533 aa14.26□□□□□ -0.13
SKA3-202ENST00000314759 YARSP54577 528 aaKnown RBP14.26□□□□□ -0.13
SKA3-202ENST00000314759 SNRPFP62306 86 aaKnown RBP14.26□□□□□ -0.13
SKA3-202ENST00000314759 SPP2Q13103 211 aa14.26□□□□□ -0.13
SKA3-202ENST00000314759 MOGSQ13724 837 aa14.26□□□□□ -0.13
SKA3-202ENST00000314759 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.26□□□□□ -0.13
SKA3-202ENST00000314759 TRABD2AQ86V40 505 aa14.26□□□□□ -0.13
SKA3-202ENST00000314759 VSIG1Q86XK7 387 aa14.26□□□□□ -0.13
SKA3-202ENST00000314759 DENND1AQ8TEH3 1009 aa14.26□□□□□ -0.13
SKA3-202ENST00000314759 FAM84AQ96KN4 292 aa14.26□□□□□ -0.13
SKA3-202ENST00000314759 CSRNP1Q96S65 589 aa14.26□□□□□ -0.13
SKA3-202ENST00000314759 SYT15Q9BQS2 421 aa14.26□□□□□ -0.13
SKA3-202ENST00000314759 RNPEPL1Q9HAU8 725 aa14.26□□□□□ -0.13
SKA3-202ENST00000314759 AVENQ9NQS1 362 aaPredicted RBP14.26□□□□□ -0.13
SKA3-202ENST00000314759 H0Y3Z8 333 aa14.26□□□□□ -0.13
SKA3-202ENST00000314759 KLRC2P26717 231 aa14.26□□□□□ -0.13
SKA3-202ENST00000314759 CNGA1P29973 690 aa14.26□□□□□ -0.13
SKA3-202ENST00000314759 YWHABP31946 246 aaKnown RBP14.26□□□□□ -0.13
SKA3-202ENST00000314759 QARSP47897 775 aaKnown RBP14.26□□□□□ -0.13
SKA3-202ENST00000314759 NCKAP1LP55160 1127 aa14.26□□□□□ -0.13
SKA3-202ENST00000314759 SETDB1Q15047 1291 aa14.26□□□□□ -0.13
SKA3-202ENST00000314759 PARP6Q2NL67 630 aa14.26□□□□□ -0.13
SKA3-202ENST00000314759 DACT2Q5SW24 774 aa14.26□□□□□ -0.13
SKA3-202ENST00000314759 SV2AQ7L0J3 742 aa14.26□□□□□ -0.13
SKA3-202ENST00000314759 BBOF1Q8ND07 529 aa14.26□□□□□ -0.13
SKA3-202ENST00000314759 LRRC37BQ96QE4 947 aa14.26□□□□□ -0.13
SKA3-202ENST00000314759 KIFC3Q9BVG8 833 aa14.26□□□□□ -0.13
SKA3-202ENST00000314759 GRID1Q9ULK0 1009 aa14.26□□□□□ -0.13
SKA3-202ENST00000314759 EP400Q96L91 3159 aa14.26□□□□□ -0.13
SKA3-202ENST00000314759 MYPNQ86TC9 1320 aa14.26□□□□□ -0.13
SKA3-202ENST00000314759 ANKRD33BA6NCL7 494 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 TPBGLP0DKB5 382 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 CALB2P22676 271 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 PCK1P35558 622 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 TAS2R40P59535 323 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 P3H1Q32P28 736 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 FAM13CQ8NE31 585 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 SUPT20HQ8NEM7 779 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 IL31RAQ8NI17 732 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 TTC8Q8TAM2 541 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 FAM81BQ96LP2 452 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 TBX20Q9UMR3 447 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 TMX2Q9Y320 296 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 UBR3Q6ZT12 1888 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 LOXHD1Q8IVV2 1947 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 EXOC1LA0A1B0GW35 172 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 PROSCO94903 275 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 SNUPNO95149 360 aaKnown RBP14.25□□□□□ -0.13
SKA3-202ENST00000314759 ABHD2P08910 425 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 PTP4A2Q12974 167 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 STRIP1Q5VSL9 837 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 LDHDQ86WU2 507 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 RIBC1Q8N443 379 aaPredicted RBP14.25□□□□□ -0.13
SKA3-202ENST00000314759 ZCCHC9Q8N567 271 aaKnown RBP14.25□□□□□ -0.13
SKA3-202ENST00000314759 IWS1Q96ST2 819 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 OSBPL8Q9BZF1 889 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 KIAA1683Q9H0B3 1180 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 KIAA1586Q9HCI6 787 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 SYNPO2Q9UMS6 1093 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.25□□□□□ -0.13
SKA3-202ENST00000314759 USH1CQ9Y6N9 552 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 UMODL1Q5DID0 1318 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 NRXN2Q9P2S2 1712 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 FESP07332 822 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 T-ENOLP0DO92 83 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 PECAM1P16284 738 aaPredicted RBP14.25□□□□□ -0.13
SKA3-202ENST00000314759 UGCGQ16739 394 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 GLIS1Q8NBF1 620 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 COL20A1Q9P218 1284 aa14.25□□□□□ -0.13
SKA3-202ENST00000314759 ATP5HO75947 161 aa14.24□□□□□ -0.13
SKA3-202ENST00000314759 GNAT1P11488 350 aa14.24□□□□□ -0.13
SKA3-202ENST00000314759 PKN2Q16513 984 aaKnown RBP14.24□□□□□ -0.13
SKA3-202ENST00000314759 FAM102BQ5T8I3 360 aa14.24□□□□□ -0.13
SKA3-202ENST00000314759 GSTA5Q7RTV2 222 aa14.24□□□□□ -0.13
SKA3-202ENST00000314759 TMEM161BQ8NDZ6 487 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms