RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 CDH7Q9ULB5 785 aa8.91□□□□□ -0.98
TPM3-203ENST00000312970 CA14Q9ULX7 337 aa8.91□□□□□ -0.98
TPM3-203ENST00000312970 CDY1Q9Y6F8 540 aa8.91□□□□□ -0.98
TPM3-203ENST00000312970 NUMBLQ9Y6R0 609 aa8.91□□□□□ -0.98
TPM3-203ENST00000312970 TRIP11Q15643 1979 aa8.91□□□□□ -0.98
TPM3-203ENST00000312970 DOCK8Q8NF50 2099 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 BAHCC1Q9P281 2608 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 VWA3AA6NCI4 1184 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 H7C4K7 107 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 I3L4J1 428 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 PODXLO00592 558 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 ABLIM1O14639 778 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 CLDN3O15551 220 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 TOM1L1O75674 476 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 ABLIM3O94929 683 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 PLA2G4BP0C869 781 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 PTPN2P17706 415 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 GJB2P29033 226 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 ELF1P32519 619 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 MCM2P49736 904 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 GPC5P78333 572 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 RAD51AP2Q09MP3 1159 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 ANGPT1Q15389 498 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 PABPC1LQ4VXU2 614 aaKnown RBP8.9□□□□□ -0.98
TPM3-203ENST00000312970 SLC8B1Q6J4K2 584 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 PARM1Q6UWI2 310 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 MTSS1LQ765P7 747 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 TMEM161BQ8NDZ6 487 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 ST13P5Q8NFI4 369 aaPredicted RBP8.9□□□□□ -0.98
TPM3-203ENST00000312970 ITFG1Q8TB96 612 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 FGF13Q92913 245 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 FGF14Q92915 247 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 SHDQ96IW2 340 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 ZMAT2Q96NC0 199 aaKnown RBP8.9□□□□□ -0.98
TPM3-203ENST00000312970 PNMA5Q96PV4 448 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 PLIN2Q99541 437 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 RPP25Q9BUL9 199 aaKnown RBP8.9□□□□□ -0.98
TPM3-203ENST00000312970 TBC1D17Q9HA65 648 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 HCFC1R1Q9NWW0 138 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 CNTN3Q9P232 1028 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 LARSQ9P2J5 1176 aaKnown RBP8.9□□□□□ -0.98
TPM3-203ENST00000312970 KCNH3Q9ULD8 1083 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 SIT1Q9Y3P8 196 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 NUB1Q9Y5A7 615 aa8.9□□□□□ -0.98
TPM3-203ENST00000312970 DOCK6Q96HP0 2047 aa8.9□□□□□ -0.99
TPM3-203ENST00000312970 VWA8A3KMH1 1905 aa8.9□□□□□ -0.99
TPM3-203ENST00000312970 H0YCG3 227 aa8.89□□□□□ -0.99
TPM3-203ENST00000312970 PRRG1O14668 218 aa8.89□□□□□ -0.99
TPM3-203ENST00000312970 SYN3O14994 580 aa8.89□□□□□ -0.99
TPM3-203ENST00000312970 SLC26A4O43511 780 aa8.89□□□□□ -0.99
TPM3-203ENST00000312970 TBC1D4O60343 1298 aa8.89□□□□□ -0.99
TPM3-203ENST00000312970 LRG1P02750 347 aa8.89□□□□□ -0.99
TPM3-203ENST00000312970 MAPTP10636 758 aaKnown RBP8.89□□□□□ -0.99
TPM3-203ENST00000312970 HARSP12081 509 aaKnown RBP8.89□□□□□ -0.99
TPM3-203ENST00000312970 ATF2P15336 505 aa8.89□□□□□ -0.99
TPM3-203ENST00000312970 MATR3P43243 847 aaKnown RBP eCLIP8.89□□□□□ -0.99
TPM3-203ENST00000312970 SLC12A3P55017 1021 aa8.89□□□□□ -0.99
TPM3-203ENST00000312970 STARD6P59095 220 aa8.89□□□□□ -0.99
TPM3-203ENST00000312970 MRPL58Q14197 206 aaKnown RBP8.89□□□□□ -0.99
TPM3-203ENST00000312970 NOLC1Q14978 699 aaKnown RBP eCLIP8.89□□□□□ -0.99
TPM3-203ENST00000312970 SLC10A6Q3KNW5 377 aa8.89□□□□□ -0.99
TPM3-203ENST00000312970 ARSHQ5FYA8 562 aa8.89□□□□□ -0.99
TPM3-203ENST00000312970 VARS2Q5ST30 1063 aaKnown RBP8.89□□□□□ -0.99
TPM3-203ENST00000312970 LARP1BQ659C4 914 aaKnown RBP8.89□□□□□ -0.99
TPM3-203ENST00000312970 ZPBP2Q6X784 338 aa8.89□□□□□ -0.99
TPM3-203ENST00000312970 C18orf25Q96B23 403 aaPredicted RBP8.89□□□□□ -0.99
TPM3-203ENST00000312970 CALML4Q96GE6 196 aa8.89□□□□□ -0.99
TPM3-203ENST00000312970 AK8Q96MA6 479 aa8.89□□□□□ -0.99
TPM3-203ENST00000312970 PLEKHA5Q9HAU0 1116 aa8.89□□□□□ -0.99
TPM3-203ENST00000312970 UPF2Q9HAU5 1272 aaKnown RBP8.89□□□□□ -0.99
TPM3-203ENST00000312970 AVENQ9NQS1 362 aaPredicted RBP8.89□□□□□ -0.99
TPM3-203ENST00000312970 ARHGEF3Q9NR81 526 aa8.89□□□□□ -0.99
TPM3-203ENST00000312970 SMC3Q9UQE7 1217 aa8.89□□□□□ -0.99
TPM3-203ENST00000312970 MRPS23Q9Y3D9 190 aaKnown RBP8.89□□□□□ -0.99
TPM3-203ENST00000312970 NPHP3-ACAD11A0A0J9YXS1 232 aa8.88□□□□□ -0.99
TPM3-203ENST00000312970 ARHGEF37A1IGU5 675 aa8.88□□□□□ -0.99
TPM3-203ENST00000312970 MEFVO15553 781 aaPredicted RBP8.88□□□□□ -0.99
TPM3-203ENST00000312970 DCNP07585 359 aaKnown RBP8.88□□□□□ -0.99
TPM3-203ENST00000312970 RHOP08100 348 aa8.88□□□□□ -0.99
TPM3-203ENST00000312970 CLTAP09496 248 aa8.88□□□□□ -0.99
TPM3-203ENST00000312970 SCP2P22307 547 aa8.88□□□□□ -0.99
TPM3-203ENST00000312970 MARCKSP29966 332 aaPredicted RBP8.88□□□□□ -0.99
TPM3-203ENST00000312970 MCM4P33991 863 aa8.88□□□□□ -0.99
TPM3-203ENST00000312970 UBA7P41226 1012 aa8.88□□□□□ -0.99
TPM3-203ENST00000312970 NCKAP1LP55160 1127 aa8.88□□□□□ -0.99
TPM3-203ENST00000312970 ARPP19P56211 112 aa8.88□□□□□ -0.99
TPM3-203ENST00000312970 PFKPQ01813 784 aa8.88□□□□□ -0.99
TPM3-203ENST00000312970 ROR1Q01973 937 aa8.88□□□□□ -0.99
TPM3-203ENST00000312970 MCL1Q07820 350 aa8.88□□□□□ -0.99
TPM3-203ENST00000312970 SNW1Q13573 536 aaKnown RBP8.88□□□□□ -0.99
TPM3-203ENST00000312970 KYAT1Q16773 422 aa8.88□□□□□ -0.99
TPM3-203ENST00000312970 CTXN3Q4LDR2 81 aa8.88□□□□□ -0.99
TPM3-203ENST00000312970 TMEM119Q4V9L6 283 aa8.88□□□□□ -0.99
TPM3-203ENST00000312970 SEZ6Q53EL9 994 aa8.88□□□□□ -0.99
TPM3-203ENST00000312970 SLC44A4Q53GD3 710 aa8.88□□□□□ -0.99
TPM3-203ENST00000312970 SPECC1Q5M775 1068 aa8.88□□□□□ -0.99
TPM3-203ENST00000312970 TPGS2Q68CL5 300 aa8.88□□□□□ -0.99
TPM3-203ENST00000312970 HAUS6Q7Z4H7 955 aa8.88□□□□□ -0.99
TPM3-203ENST00000312970 TCEAL8Q8IYN2 117 aa8.88□□□□□ -0.99
TPM3-203ENST00000312970 APPL2Q8NEU8 664 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms