RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 ZNF280DQ6N043 979 aa21.44■■□□□ 1.02
VEGFB-201ENST00000309422 CRELD2Q6UXH1 353 aaPredicted RBP21.44■■□□□ 1.02
VEGFB-201ENST00000309422 TAS1R1Q7RTX1 841 aa21.44■■□□□ 1.02
VEGFB-201ENST00000309422 CBWD2Q8IUF1 395 aa21.44■■□□□ 1.02
VEGFB-201ENST00000309422 RDH13Q8NBN7 331 aa21.44■■□□□ 1.02
VEGFB-201ENST00000309422 B3GALT6Q96L58 329 aa21.44■■□□□ 1.02
VEGFB-201ENST00000309422 ITGA11Q9UKX5 1188 aa21.44■■□□□ 1.02
VEGFB-201ENST00000309422 TEX28O15482 410 aa21.43■■□□□ 1.02
VEGFB-201ENST00000309422 NR3C1P04150 777 aa21.43■■□□□ 1.02
VEGFB-201ENST00000309422 KRT19P08727 400 aa21.43■■□□□ 1.02
VEGFB-201ENST00000309422 DLATP10515 647 aaKnown RBP21.43■■□□□ 1.02
VEGFB-201ENST00000309422 HOXD13P35453 343 aa21.43■■□□□ 1.02
VEGFB-201ENST00000309422 BRCC3P46736 316 aa21.43■■□□□ 1.02
VEGFB-201ENST00000309422 TAF6P49848 677 aa21.43■■□□□ 1.02
VEGFB-201ENST00000309422 MYBPC2Q14324 1141 aa21.43■■□□□ 1.02
VEGFB-201ENST00000309422 ZBTB6Q15916 424 aa21.43■■□□□ 1.02
VEGFB-201ENST00000309422 LIN9Q5TKA1 542 aa21.43■■□□□ 1.02
VEGFB-201ENST00000309422 C9orf57Q5W0N0 161 aa21.43■■□□□ 1.02
VEGFB-201ENST00000309422 CEP135Q66GS9 1140 aa21.43■■□□□ 1.02
VEGFB-201ENST00000309422 WDR49Q8IV35 697 aa21.43■■□□□ 1.02
VEGFB-201ENST00000309422 C3orf58Q8NDZ4 430 aa21.43■■□□□ 1.02
VEGFB-201ENST00000309422 SUSD3Q96L08 255 aa21.43■■□□□ 1.02
VEGFB-201ENST00000309422 RXFP1Q9HBX9 757 aa21.43■■□□□ 1.02
VEGFB-201ENST00000309422 MAPK8IP1Q9UQF2 711 aa21.43■■□□□ 1.02
VEGFB-201ENST00000309422 CITO14578 2027 aa21.42■■□□□ 1.02
VEGFB-201ENST00000309422 I3L4J1 428 aa21.42■■□□□ 1.02
VEGFB-201ENST00000309422 MEFVO15553 781 aaPredicted RBP21.42■■□□□ 1.02
VEGFB-201ENST00000309422 FGFR3P22607 806 aa21.42■■□□□ 1.02
VEGFB-201ENST00000309422 TKTP29401 623 aaKnown RBP21.42■■□□□ 1.02
VEGFB-201ENST00000309422 DUOXA2Q1HG44 320 aa21.42■■□□□ 1.02
VEGFB-201ENST00000309422 ANKRD54Q6NXT1 300 aa21.42■■□□□ 1.02
VEGFB-201ENST00000309422 TMEM184AQ6ZMB5 413 aa21.42■■□□□ 1.02
VEGFB-201ENST00000309422 METTL23Q86XA0 190 aa21.42■■□□□ 1.02
VEGFB-201ENST00000309422 CCDC127Q96BQ5 260 aa21.42■■□□□ 1.02
VEGFB-201ENST00000309422 FBXL18Q96ME1 805 aa21.42■■□□□ 1.02
VEGFB-201ENST00000309422 OXCT2Q9BYC2 517 aaPredicted RBP21.42■■□□□ 1.02
VEGFB-201ENST00000309422 SFXN1Q9H9B4 322 aa21.42■■□□□ 1.02
VEGFB-201ENST00000309422 PDE11AQ9HCR9 933 aa21.42■■□□□ 1.02
VEGFB-201ENST00000309422 DSEQ9UL01 958 aa21.42■■□□□ 1.02
VEGFB-201ENST00000309422 PCDHB8Q9UN66 801 aa21.42■■□□□ 1.02
VEGFB-201ENST00000309422 PCDHA5Q9Y5H7 936 aa21.42■■□□□ 1.02
VEGFB-201ENST00000309422 EYSQ5T1H1 3165 aa21.42■■□□□ 1.02
VEGFB-201ENST00000309422 PSMA7O14818 248 aa21.41■■□□□ 1.02
VEGFB-201ENST00000309422 EFEMP2O95967 443 aa21.41■■□□□ 1.02
VEGFB-201ENST00000309422 C1RP00736 705 aa21.41■■□□□ 1.02
VEGFB-201ENST00000309422 NR2F2P24468 414 aa21.41■■□□□ 1.02
VEGFB-201ENST00000309422 GUCY2FP51841 1108 aa21.41■■□□□ 1.02
VEGFB-201ENST00000309422 YWHAHQ04917 246 aaPredicted RBP21.41■■□□□ 1.02
VEGFB-201ENST00000309422 MYO1EQ12965 1108 aa21.41■■□□□ 1.02
VEGFB-201ENST00000309422 VARS2Q5ST30 1063 aaKnown RBP21.41■■□□□ 1.02
VEGFB-201ENST00000309422 PRSS55Q6UWB4 352 aaPredicted RBP21.41■■□□□ 1.02
VEGFB-201ENST00000309422 GLYCTKQ8IVS8 523 aa21.41■■□□□ 1.02
VEGFB-201ENST00000309422 EFCAB13Q8IY85 973 aa21.41■■□□□ 1.02
VEGFB-201ENST00000309422 MTMR12Q9C0I1 747 aa21.41■■□□□ 1.02
VEGFB-201ENST00000309422 LILRB3O75022 631 aa21.4■■□□□ 1.02
VEGFB-201ENST00000309422 GLP2RO95838 553 aa21.4■■□□□ 1.02
VEGFB-201ENST00000309422 ITGB3P05106 788 aa21.4■■□□□ 1.02
VEGFB-201ENST00000309422 KRT13P13646 458 aa21.4■■□□□ 1.02
VEGFB-201ENST00000309422 CLCN4P51793 760 aa21.4■■□□□ 1.02
VEGFB-201ENST00000309422 AP3M2P53677 418 aa21.4■■□□□ 1.02
VEGFB-201ENST00000309422 RBP5P82980 135 aa21.4■■□□□ 1.02
VEGFB-201ENST00000309422 ITIH3Q06033 890 aa21.4■■□□□ 1.02
VEGFB-201ENST00000309422 CYP24A1Q07973 514 aa21.4■■□□□ 1.02
VEGFB-201ENST00000309422 PSMD6Q15008 389 aa21.4■■□□□ 1.02
VEGFB-201ENST00000309422 SLC9A9Q8IVB4 645 aa21.4■■□□□ 1.02
VEGFB-201ENST00000309422 POP1Q99575 1024 aaKnown RBP21.4■■□□□ 1.02
VEGFB-201ENST00000309422 KCTD10Q9H3F6 313 aa21.4■■□□□ 1.02
VEGFB-201ENST00000309422 MAN1C1Q9NR34 630 aa21.4■■□□□ 1.02
VEGFB-201ENST00000309422 MTRRQ9UBK8 725 aa21.4■■□□□ 1.02
VEGFB-201ENST00000309422 TRAF3IP3Q9Y228 551 aa21.4■■□□□ 1.02
VEGFB-201ENST00000309422 BACE2Q9Y5Z0 518 aa21.4■■□□□ 1.02
VEGFB-201ENST00000309422 PHACTR2O75167 634 aa21.39■■□□□ 1.02
VEGFB-201ENST00000309422 EPCAMP16422 314 aa21.39■■□□□ 1.02
VEGFB-201ENST00000309422 POLR2BP30876 1174 aaKnown RBP21.39■■□□□ 1.02
VEGFB-201ENST00000309422 KCNQ1P51787 676 aa21.39■■□□□ 1.02
VEGFB-201ENST00000309422 CTXN3Q4LDR2 81 aa21.39■■□□□ 1.02
VEGFB-201ENST00000309422 CLEC17AQ6ZS10 378 aa21.39■■□□□ 1.02
VEGFB-201ENST00000309422 PALB2Q86YC2 1186 aa21.39■■□□□ 1.02
VEGFB-201ENST00000309422 CSGALNACT2Q8N6G5 542 aa21.39■■□□□ 1.02
VEGFB-201ENST00000309422 LRRC52Q8N7C0 313 aa21.39■■□□□ 1.02
VEGFB-201ENST00000309422 SMRP1Q8NCR6 262 aa21.39■■□□□ 1.02
VEGFB-201ENST00000309422 LNX1Q8TBB1 728 aaPredicted RBP21.39■■□□□ 1.02
VEGFB-201ENST00000309422 HDAC7Q8WUI4 952 aa21.39■■□□□ 1.02
VEGFB-201ENST00000309422 RIPOR3Q96MK2 946 aa21.39■■□□□ 1.02
VEGFB-201ENST00000309422 NECTIN4Q96NY8 510 aa21.39■■□□□ 1.02
VEGFB-201ENST00000309422 CGRRF1Q99675 332 aa21.39■■□□□ 1.02
VEGFB-201ENST00000309422 PLEKHA4Q9H4M7 779 aa21.39■■□□□ 1.02
VEGFB-201ENST00000309422 INTS13Q9NVM9 706 aa21.39■■□□□ 1.02
VEGFB-201ENST00000309422 AGAP1Q9UPQ3 857 aa21.39■■□□□ 1.02
VEGFB-201ENST00000309422 EPB41P11171 864 aaKnown RBP21.38■■□□□ 1.01
VEGFB-201ENST00000309422 CPB1P15086 417 aa21.38■■□□□ 1.01
VEGFB-201ENST00000309422 RPL17P18621 184 aaKnown RBP21.38■■□□□ 1.01
VEGFB-201ENST00000309422 ELF1P32519 619 aa21.38■■□□□ 1.01
VEGFB-201ENST00000309422 LTBRP36941 435 aa21.38■■□□□ 1.01
VEGFB-201ENST00000309422 LILRA4P59901 499 aa21.38■■□□□ 1.01
VEGFB-201ENST00000309422 DLX2Q07687 328 aaPredicted RBP21.38■■□□□ 1.01
VEGFB-201ENST00000309422 TRPC3Q13507 836 aa21.38■■□□□ 1.01
VEGFB-201ENST00000309422 NFIL3Q16649 462 aa21.38■■□□□ 1.01
VEGFB-201ENST00000309422 EDRF1Q3B7T1 1238 aa21.38■■□□□ 1.01
VEGFB-201ENST00000309422 SMYD4Q8IYR2 804 aaPredicted RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms