RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 PRPHP41219 470 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 SNX17Q15036 470 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 LONRF2Q1L5Z9 754 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 IER5Q5VY09 327 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 SPECC1LQ69YQ0 1117 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 KCNV1Q6PIU1 500 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 SRGAP1Q7Z6B7 1085 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 ACOT1Q86TX2 421 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 PACS2Q86VP3 889 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 ZNF354CQ86Y25 554 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 C4orf19Q8IY42 314 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 TTC8Q8TAM2 541 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 GOLGA5Q8TBA6 731 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 PXYLP1Q8TE99 480 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 IPO4Q8TEX9 1081 aaKnown RBP5.3□□□□□ -1.56
CAST-201ENST00000309190 PIK3R5Q8WYR1 880 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 NAP1L4Q99733 375 aaKnown RBP5.3□□□□□ -1.56
CAST-201ENST00000309190 TUFT1Q9NNX1 390 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 ZNHIT6Q9NWK9 470 aaKnown RBP5.3□□□□□ -1.56
CAST-201ENST00000309190 SMARCAL1Q9NZC9 954 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 LACTBL1A8MY62 500 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 ZNF263O14978 683 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 CALUO43852 315 aaPredicted RBP5.3□□□□□ -1.56
CAST-201ENST00000309190 MYBL2P10244 700 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 HSPA8P11142 646 aaKnown RBP5.3□□□□□ -1.56
CAST-201ENST00000309190 GJA1P17302 382 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 ECHS1P30084 290 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 VAMP7P51809 220 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 EHHADHQ08426 723 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 MAPK7Q13164 816 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 BRD3Q15059 726 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 LRRC26Q2I0M4 334 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 USP37Q86T82 979 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 PPTC7Q8NI37 304 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 ARNTL2Q8WYA1 636 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 CTNNBL1Q8WYA6 563 aaPredicted RBP5.3□□□□□ -1.56
CAST-201ENST00000309190 DNAJB4Q9UDY4 337 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 GTF3C4Q9UKN8 822 aa5.3□□□□□ -1.56
CAST-201ENST00000309190 RCCD1A6NED2 376 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 ITGB1P05556 798 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 CYBAP13498 195 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 OAS2P29728 719 aaKnown RBP5.29□□□□□ -1.56
CAST-201ENST00000309190 PSMC2P35998 433 aaKnown RBP5.29□□□□□ -1.56
CAST-201ENST00000309190 MYL7Q01449 175 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 GFPT1Q06210 699 aaPredicted RBP5.29□□□□□ -1.56
CAST-201ENST00000309190 TFDP1Q14186 410 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 SMC1AQ14683 1233 aaKnown RBP5.29□□□□□ -1.56
CAST-201ENST00000309190 WDR44Q5JSH3 913 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 JADE1Q6IE81 842 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 SV2AQ7L0J3 742 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 ZNF280BQ86YH2 543 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 SUGP1Q8IWZ8 645 aaKnown RBP5.29□□□□□ -1.56
CAST-201ENST00000309190 GPATCH11Q8N954 259 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 GIMAP8Q8ND71 665 aaPredicted RBP5.29□□□□□ -1.56
CAST-201ENST00000309190 CCDC42Q96M95 316 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 ACAP3Q96P50 834 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 CARD6Q9BX69 1037 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 MRPL4Q9BYD3 311 aaKnown RBP5.29□□□□□ -1.56
CAST-201ENST00000309190 ABI2Q9NYB9 513 aaPredicted RBP5.29□□□□□ -1.56
CAST-201ENST00000309190 PTPRJQ12913 1337 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 CFAP54Q96N23 3096 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 LRRC53A6NM62 1247 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 CHRNA1P02708 482 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 VPS41P49754 854 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 MMP14P50281 582 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 RTP1P59025 263 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 VSNL1P62760 191 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 DEFB103AP81534 67 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 KLHL30Q0D2K2 578 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 ODF2Q5BJF6 829 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 CYP4A22Q5TCH4 519 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 CCDC181Q5TID7 509 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 ZNF365Q70YC5 407 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 EFCAB3Q8N7B9 438 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 PCSK9Q8NBP7 692 aaKnown RBP5.29□□□□□ -1.56
CAST-201ENST00000309190 C1orf131Q8NDD1 294 aaKnown RBP5.29□□□□□ -1.56
CAST-201ENST00000309190 POLR3CQ9BUI4 534 aaPredicted RBP5.29□□□□□ -1.56
CAST-201ENST00000309190 NAA15Q9BXJ9 866 aaKnown RBP5.29□□□□□ -1.56
CAST-201ENST00000309190 IGSF5Q9NSI5 407 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 TARSL2A2RTX5 802 aaKnown RBP5.29□□□□□ -1.56
CAST-201ENST00000309190 THAP12O43422 761 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 C22orf31O95567 290 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 GPC3P51654 580 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 CORO7P57737 925 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 MCCD1P59942 119 aaPredicted RBP5.29□□□□□ -1.56
CAST-201ENST00000309190 GNG11P61952 73 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 ATP11AP98196 1134 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 CDK17Q00537 523 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 BTG3Q14201 252 aaPredicted RBP5.29□□□□□ -1.56
CAST-201ENST00000309190 MIIPQ5JXC2 388 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 MARCH8Q5T0T0 291 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 SWT1Q5T5J6 900 aaKnown RBP5.29□□□□□ -1.56
CAST-201ENST00000309190 NOA1Q8NC60 698 aaKnown RBP5.29□□□□□ -1.56
CAST-201ENST00000309190 PLEKHO2Q8TD55 490 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 ADAMTS19Q8TE59 1207 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 CRYGNQ8WXF5 182 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 KIFAP3Q92845 792 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 HAUS1Q96CS2 278 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 HAPLN2Q9GZV7 340 aa5.29□□□□□ -1.56
CAST-201ENST00000309190 CDT1Q9H211 546 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms