RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 CEP128Q6ZU80 1094 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 FAM126BQ8IXS8 530 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 KRT222Q8N1A0 295 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 SLC43A3Q8NBI5 491 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 RNF141Q8WVD5 230 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 PPM1EQ8WY54 764 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 DDX11Q96FC9 970 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 C16orf45Q96MC5 204 aaPredicted RBP5.48□□□□□ -1.53
CKS1B-201ENST00000308987 SDF4Q9BRK5 362 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 MTA3Q9BTC8 594 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 NKX2-4Q9H2Z4 354 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 STARD7Q9NQZ5 370 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 ATP8A2Q9NTI2 1148 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 SLC5A4Q9NY91 659 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 KLHL14Q9P2G3 628 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 TUBE1Q9UJT0 475 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 ADAM30Q9UKF2 790 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 PCDHA7Q9UN72 937 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 SIP14410 1827 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 ZMYM6O95789 1325 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 PHLPP2Q6ZVD8 1323 aa5.48□□□□□ -1.53
CKS1B-201ENST00000308987 BAZ2BQ9UIF8 2168 aaKnown RBP5.48□□□□□ -1.53
CKS1B-201ENST00000308987 DOCK5Q9H7D0 1870 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 MICAL3Q7RTP6 2002 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 GOLGA6L9A6NEM1 432 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 EPOPA6NHQ4 379 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 GSG1L2A8MUP6 293 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 F5H6K3 240 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 MATN3O15232 486 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 FSHBP01225 129 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 C6orf222P0C671 652 aaPredicted RBP5.47□□□□□ -1.53
CKS1B-201ENST00000308987 FDPSP14324 419 aaKnown RBP5.47□□□□□ -1.53
CKS1B-201ENST00000308987 TFE3P19532 575 aaPredicted RBP5.47□□□□□ -1.53
CKS1B-201ENST00000308987 SFPQP23246 707 aaKnown RBP eCLIP5.47□□□□□ -1.53
CKS1B-201ENST00000308987 KIR2DL1P43626 348 aaPredicted RBP5.47□□□□□ -1.53
CKS1B-201ENST00000308987 KIR2DL2P43627 348 aaPredicted RBP5.47□□□□□ -1.53
CKS1B-201ENST00000308987 RABGGTBP53611 331 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 TUBB4BP68371 445 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 NKX3-2P78367 333 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 CBX1P83916 185 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 TFF2Q03403 129 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 KLRC3Q07444 240 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 KCTD2Q14681 263 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 BMS1Q14692 1282 aaKnown RBP5.47□□□□□ -1.53
CKS1B-201ENST00000308987 TTF1Q15361 905 aaPredicted RBP5.47□□□□□ -1.53
CKS1B-201ENST00000308987 SF3A1Q15459 793 aaKnown RBP5.47□□□□□ -1.53
CKS1B-201ENST00000308987 ALX1Q15699 326 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 AXDND1Q5T1B0 1012 aaPredicted RBP5.47□□□□□ -1.53
CKS1B-201ENST00000308987 AKNAD1Q5T1N1 836 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 MEI1Q5TIA1 1274 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 KRT40Q6A162 431 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 CPLX2Q6PUV4 134 aaKnown RBP5.47□□□□□ -1.53
CKS1B-201ENST00000308987 CCDC129Q6ZRS4 1044 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 ARMCX2Q7L311 632 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 RASGRP2Q7LDG7 609 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 MB21D2Q8IYB1 491 aaPredicted RBP5.47□□□□□ -1.53
CKS1B-201ENST00000308987 AOPEPQ8N6M6 819 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 FAM133AQ8N9E0 248 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 NCOA7Q8NI08 942 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 HERVK_113Q902F9 699 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 APPBP2Q92624 585 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 MAP6Q96JE9 813 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 C8orf76Q96K31 380 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 CCDC17Q96LX7 622 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 ASB2Q96Q27 587 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 SEC62Q99442 399 aaKnown RBP5.47□□□□□ -1.53
CKS1B-201ENST00000308987 SLF1Q9BQI6 1058 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 TEX13BQ9BXU2 312 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 TRPV6Q9H1D0 765 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 WNT8AQ9H1J5 351 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 KANSL2Q9H9L4 492 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 SLC38A10Q9HBR0 1119 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 RAVER2Q9HCJ3 691 aaKnown RBP5.47□□□□□ -1.53
CKS1B-201ENST00000308987 ZHX1Q9UKY1 873 aaPredicted RBP5.47□□□□□ -1.53
CKS1B-201ENST00000308987 FAM184BQ9ULE4 1060 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 PCDHA5Q9Y5H7 936 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 NLRC5Q86WI3 1866 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 SPTBN4Q9H254 2564 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 ZNF536O15090 1300 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 STK36Q9NRP7 1315 aa5.47□□□□□ -1.53
CKS1B-201ENST00000308987 NID2Q14112 1375 aa5.46□□□□□ -1.54
CKS1B-201ENST00000308987 A0A0U1RQG5 324 aaPredicted RBP5.46□□□□□ -1.54
CKS1B-201ENST00000308987 CPLX1O14810 134 aa5.46□□□□□ -1.54
CKS1B-201ENST00000308987 ATP2A1O14983 1001 aa5.46□□□□□ -1.54
CKS1B-201ENST00000308987 ZSCAN12O43309 604 aa5.46□□□□□ -1.54
CKS1B-201ENST00000308987 PRC1O43663 620 aa5.46□□□□□ -1.54
CKS1B-201ENST00000308987 BUB1BO60566 1050 aaPredicted RBP5.46□□□□□ -1.54
CKS1B-201ENST00000308987 CUTAO60888 179 aa5.46□□□□□ -1.54
CKS1B-201ENST00000308987 ZNF202O95125 648 aa5.46□□□□□ -1.54
CKS1B-201ENST00000308987 H2AFXP16104 143 aaPredicted RBP5.46□□□□□ -1.54
CKS1B-201ENST00000308987 U2AF2P26368 475 aaKnown RBP eCLIP5.46□□□□□ -1.54
CKS1B-201ENST00000308987 KCNQ1P51787 676 aa5.46□□□□□ -1.54
CKS1B-201ENST00000308987 RCAN1P53805 252 aa5.46□□□□□ -1.54
CKS1B-201ENST00000308987 NCKAP1LP55160 1127 aa5.46□□□□□ -1.54
CKS1B-201ENST00000308987 CCT2P78371 535 aaKnown RBP5.46□□□□□ -1.54
CKS1B-201ENST00000308987 PPIGQ13427 754 aaKnown RBP eCLIP5.46□□□□□ -1.54
CKS1B-201ENST00000308987 NCAPHQ15003 741 aa5.46□□□□□ -1.54
CKS1B-201ENST00000308987 UBE3CQ15386 1083 aa5.46□□□□□ -1.54
CKS1B-201ENST00000308987 SBK1Q52WX2 424 aa5.46□□□□□ -1.54
CKS1B-201ENST00000308987 CXCL17Q6UXB2 119 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms