RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 TFAMQ00059 246 aaKnown RBP13.79□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 ARID5AQ03989 594 aa13.79□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 NFX1Q12986 1120 aaKnown RBP13.79□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 FAM43BQ6ZT52 329 aaPredicted RBP13.79□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 SLC30A5Q8TAD4 765 aa13.79□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 CXorf38Q8TB03 319 aa13.79□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 VWCEQ96DN2 955 aa13.79□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 C16orf45Q96MC5 204 aaPredicted RBP13.79□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 PI4K2AQ9BTU6 479 aa13.79□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 IMPG2Q9BZV3 1241 aa13.79□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 VRTNQ9H8Y1 702 aa13.79□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 APOBEC3GQ9HC16 384 aaKnown RBP13.79□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 LUC7LQ9NQ29 371 aaKnown RBP13.79□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 TMEM39AQ9NV64 488 aa13.79□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 NENFQ9UMX5 172 aa13.79□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 PCDHA13Q9Y5I0 950 aa13.79□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 ALPK3Q96L96 1907 aa13.78□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 A0A087X0T9 212 aa13.78□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 TRIM43BA6NCK2 446 aa13.78□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 STAU1O95793 577 aaKnown RBP13.78□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 FAM228BP0C875 321 aa13.78□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 ATICP31939 592 aa13.78□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 MAGEA1P43355 309 aa13.78□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 NOP14P78316 857 aaKnown RBP13.78□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 TRPC3Q13507 836 aa13.78□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 ZBTB6Q15916 424 aa13.78□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 PLEKHG4Q58EX7 1191 aa13.78□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 JADE1Q6IE81 842 aa13.78□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.78□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 OLIG1Q8TAK6 271 aa13.78□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 KAT5Q92993 513 aa13.78□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 TRIM43Q96BQ3 446 aaPredicted RBP13.78□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 FAM84AQ96KN4 292 aa13.78□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 SNX27Q96L92 541 aa13.78□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 IFIH1Q9BYX4 1025 aaKnown RBP13.78□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 PPP1R12CQ9BZL4 782 aa13.78□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 XYLT2Q9H1B5 865 aa13.78□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 FAM124BQ9H5Z6 455 aaPredicted RBP13.78□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 MYO1AQ9UBC5 1043 aa13.78□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 ADAMTS1Q9UHI8 967 aa13.78□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 PDE4DIPQ5VU43 2346 aa13.78□□□□□ -0.2
SHANK2-AS3-201ENST00000307548 PARNO95453 639 aaKnown RBP13.77□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 NFICP08651 508 aa13.77□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 ACO1P21399 889 aaKnown RBP13.77□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 ITGB8P26012 769 aa13.77□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 YARSP54577 528 aaKnown RBP13.77□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 CCL23P55773 120 aa13.77□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 BPIFB4P59827 614 aa13.77□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 CYP27A1Q02318 531 aa13.77□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 CUL2Q13617 745 aa13.77□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 TMEM132DQ14C87 1099 aa13.77□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 TCTN1Q2MV58 587 aa13.77□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 RTN4RL1Q86UN2 441 aaPredicted RBP13.77□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 UBR7Q8N806 425 aa13.77□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 C1orf127Q8N9H9 656 aa13.77□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 SMG8Q8ND04 991 aaKnown RBP13.77□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 LINC01599Q8WXQ3 324 aa13.77□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 SCLYQ96I15 445 aa13.77□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 TSGA10Q9BZW7 698 aa13.77□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 TRIM6Q9C030 488 aaPredicted RBP13.77□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 SNTG2Q9NY99 539 aa13.77□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 CNTN3Q9P232 1028 aa13.77□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 SIX4Q9UIU6 781 aa13.77□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 ITGA11Q9UKX5 1188 aa13.77□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 NUB1Q9Y5A7 615 aa13.77□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 CITO14578 2027 aa13.76□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 TULP1O00294 542 aaPredicted RBP13.76□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 KRT86O43790 486 aa13.76□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 PNMA6AP0CW24 399 aaPredicted RBP13.76□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 KCNE1P15382 129 aa13.76□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 RGS19P49795 217 aa13.76□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 MYL6P60660 151 aa13.76□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 GFPT1Q06210 699 aaPredicted RBP13.76□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 NAB2Q15742 525 aa13.76□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 ARHGAP29Q52LW3 1261 aa13.76□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 MRPL10Q7Z7H8 261 aaKnown RBP13.76□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 KIAA1328Q86T90 577 aa13.76□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 NXF3Q9H4D5 531 aaKnown RBP13.76□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 NAGPAQ9UK23 515 aa13.76□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 INTUQ9ULD6 942 aa13.76□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 SCN5AQ14524 2016 aa13.76□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 BTNL10A8MVZ5 291 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 DDX3XO00571 662 aaKnown RBP eCLIP13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 ZNF623O75123 536 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 TIMP1P01033 207 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 RBP5P82980 135 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 KIF5AQ12840 1032 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 DNTTIP2Q5QJE6 756 aaKnown RBP13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 TWF2Q6IBS0 349 aaKnown RBP13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 DBF4BQ8NFT6 615 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 AGPAT1Q99943 283 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 ADAM2Q99965 735 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 NIF3L1Q9GZT8 377 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 LACRTQ9GZZ8 138 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 FAM105AQ9NUU6 356 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 NOCTQ9UK39 431 aaKnown RBP13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 HES2Q9Y543 173 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 IPPQ9Y573 584 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 PAXBP1Q9Y5B6 917 aa13.75□□□□□ -0.21
SHANK2-AS3-201ENST00000307548 PCDHB2Q9Y5E7 798 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms