RNA–Protein interactions for RNA: ENST00000302536.2

VAT1L-201, Transcript of vesicle amine transport 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1L, Length 3,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1L-201ENST00000302536 TARS2Q9BW92 718 aaKnown RBP13.64□□□□□ -0.23
VAT1L-201ENST00000302536 SNCAIPQ9Y6H5 919 aa13.64□□□□□ -0.23
VAT1L-201ENST00000302536 PHLDB3Q6NSJ2 640 aa13.64□□□□□ -0.23
VAT1L-201ENST00000302536 C9orf72Q96LT7 481 aa13.64□□□□□ -0.23
VAT1L-201ENST00000302536 ZNF302Q9NR11 478 aa13.64□□□□□ -0.23
VAT1L-201ENST00000302536 RNF19AQ9NV58 838 aa13.64□□□□□ -0.23
VAT1L-201ENST00000302536 DPPA5A6NC42 116 aa13.64□□□□□ -0.23
VAT1L-201ENST00000302536 PIAS1O75925 651 aa13.64□□□□□ -0.23
VAT1L-201ENST00000302536 LUC7L3O95232 432 aaKnown RBP13.64□□□□□ -0.23
VAT1L-201ENST00000302536 IREB2P48200 963 aaKnown RBP13.64□□□□□ -0.23
VAT1L-201ENST00000302536 JAK3P52333 1124 aa13.64□□□□□ -0.23
VAT1L-201ENST00000302536 CAVIN3Q969G5 261 aa13.64□□□□□ -0.23
VAT1L-201ENST00000302536 ERP27Q96DN0 273 aa13.64□□□□□ -0.23
VAT1L-201ENST00000302536 C19orf81C9J6K1 198 aa13.63□□□□□ -0.23
VAT1L-201ENST00000302536 YBX3P16989 372 aaKnown RBP eCLIP13.63□□□□□ -0.23
VAT1L-201ENST00000302536 RASSF2P50749 326 aa13.63□□□□□ -0.23
VAT1L-201ENST00000302536 GALCP54803 685 aa13.63□□□□□ -0.23
VAT1L-201ENST00000302536 COG7P83436 770 aa13.63□□□□□ -0.23
VAT1L-201ENST00000302536 STRN3Q13033 797 aa13.63□□□□□ -0.23
VAT1L-201ENST00000302536 Q3C1V9 767 aa13.63□□□□□ -0.23
VAT1L-201ENST00000302536 FIGNQ5HY92 759 aa13.63□□□□□ -0.23
VAT1L-201ENST00000302536 C6orf163Q5TEZ5 329 aa13.63□□□□□ -0.23
VAT1L-201ENST00000302536 SLC7A3Q8WY07 619 aa13.63□□□□□ -0.23
VAT1L-201ENST00000302536 TGS1Q96RS0 853 aaKnown RBP13.63□□□□□ -0.23
VAT1L-201ENST00000302536 KLF6Q99612 283 aaPredicted RBP13.63□□□□□ -0.23
VAT1L-201ENST00000302536 SYT17Q9BSW7 474 aa13.63□□□□□ -0.23
VAT1L-201ENST00000302536 VPS33BQ9H267 617 aa13.63□□□□□ -0.23
VAT1L-201ENST00000302536 RHBDL2Q9NX52 303 aa13.63□□□□□ -0.23
VAT1L-201ENST00000302536 NAGPAQ9UK23 515 aa13.63□□□□□ -0.23
VAT1L-201ENST00000302536 AADACL2Q6P093 401 aa13.63□□□□□ -0.23
VAT1L-201ENST00000302536 THNSL1Q8IYQ7 743 aa13.63□□□□□ -0.23
VAT1L-201ENST00000302536 FBXO25Q8TCJ0 367 aa13.63□□□□□ -0.23
VAT1L-201ENST00000302536 TAS1R2Q8TE23 839 aa13.63□□□□□ -0.23
VAT1L-201ENST00000302536 NAF1Q96HR8 494 aaKnown RBP13.63□□□□□ -0.23
VAT1L-201ENST00000302536 RILPQ96NA2 401 aa13.63□□□□□ -0.23
VAT1L-201ENST00000302536 FIZ1Q96SL8 496 aa13.63□□□□□ -0.23
VAT1L-201ENST00000302536 ASCC2Q9H1I8 757 aaPredicted RBP13.63□□□□□ -0.23
VAT1L-201ENST00000302536 PNMA3Q9UL41 463 aa13.63□□□□□ -0.23
VAT1L-201ENST00000302536 TBX20Q9UMR3 447 aa13.63□□□□□ -0.23
VAT1L-201ENST00000302536 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.63□□□□□ -0.23
VAT1L-201ENST00000302536 SPDYE5A6NIY4 337 aa13.63□□□□□ -0.23
VAT1L-201ENST00000302536 NQO1P15559 274 aaKnown RBP13.63□□□□□ -0.23
VAT1L-201ENST00000302536 CA4P22748 312 aa13.63□□□□□ -0.23
VAT1L-201ENST00000302536 PDE6CP51160 858 aa13.63□□□□□ -0.23
VAT1L-201ENST00000302536 XRCC4Q13426 336 aa13.63□□□□□ -0.23
VAT1L-201ENST00000302536 TMED1Q13445 227 aa13.63□□□□□ -0.23
VAT1L-201ENST00000302536 KCTD2Q14681 263 aa13.63□□□□□ -0.23
VAT1L-201ENST00000302536 SCARA5Q6ZMJ2 495 aa13.63□□□□□ -0.23
VAT1L-201ENST00000302536 SNRNP27Q8WVK2 155 aaKnown RBP13.63□□□□□ -0.23
VAT1L-201ENST00000302536 OPTNQ96CV9 577 aa13.63□□□□□ -0.23
VAT1L-201ENST00000302536 TXNRD2Q9NNW7 524 aa13.63□□□□□ -0.23
VAT1L-201ENST00000302536 C2CD2Q9Y426 696 aa13.63□□□□□ -0.23
VAT1L-201ENST00000302536 CFAP69A5D8W1 941 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 K7ERI5 159 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 DDX3XO00571 662 aaKnown RBP eCLIP13.62□□□□□ -0.23
VAT1L-201ENST00000302536 ATF7P17544 494 aaPredicted RBP13.62□□□□□ -0.23
VAT1L-201ENST00000302536 CD58P19256 250 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 SCNN1BP51168 640 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 COBLL1Q53SF7 1204 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 CEP128Q6ZU80 1094 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 IRF2BP2Q7Z5L9 587 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 TMEM130Q8N3G9 435 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 UBL4BQ8N7F7 174 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 USP38Q8NB14 1042 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 PLEKHO2Q8TD55 490 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 TATDN2Q93075 761 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 TMEM206Q9H813 350 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 CYP26B1Q9NR63 512 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 HAO1Q9UJM8 370 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 AFG3L2Q9Y4W6 797 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 INO80B-WBP1J3KQ70 363 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 MGRN1O60291 552 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 SGPL1O95470 568 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 SOX5P35711 763 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 RFC5P40937 340 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 ZBTB41Q5SVQ8 909 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 TRIM74Q86UV6 250 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 TRIM73Q86UV7 250 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 C4orf33Q8N1A6 199 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.62□□□□□ -0.23
VAT1L-201ENST00000302536 INO80BQ9C086 356 aaPredicted RBP13.62□□□□□ -0.23
VAT1L-201ENST00000302536 SPATC1LQ9H0A9 340 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 PDGFCQ9NRA1 345 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 SEL1LQ9UBV2 794 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 ADGRA3Q8IWK6 1321 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 INHBEP58166 350 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 DNAJC3Q13217 504 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 RNF220Q5VTB9 566 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 LLGL2Q6P1M3 1020 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 TLDC1Q6P9B6 456 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 RAB3IL1Q8TBN0 382 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 CCT6BQ92526 530 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 UPF1Q92900 1129 aaKnown RBP eCLIP13.62□□□□□ -0.23
VAT1L-201ENST00000302536 THAP2Q9H0W7 228 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 APEX2Q9UBZ4 518 aa13.62□□□□□ -0.23
VAT1L-201ENST00000302536 EIF3DO15371 548 aaKnown RBP eCLIP13.61□□□□□ -0.23
VAT1L-201ENST00000302536 KRT16P08779 473 aa13.61□□□□□ -0.23
VAT1L-201ENST00000302536 FECHP22830 423 aa13.61□□□□□ -0.23
VAT1L-201ENST00000302536 TCF7P36402 384 aaPredicted RBP13.61□□□□□ -0.23
VAT1L-201ENST00000302536 RAB27AP51159 221 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms