RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 NMUR2Q9GZQ4 415 aa15.26■□□□□ 0.03
CDT1-201ENST00000301019 SLC17A7Q9P2U7 560 aa15.26■□□□□ 0.03
CDT1-201ENST00000301019 STX18Q9P2W9 335 aaKnown RBP15.26■□□□□ 0.03
CDT1-201ENST00000301019 PPARGC1AQ9UBK2 798 aaKnown RBP15.26■□□□□ 0.03
CDT1-201ENST00000301019 ZNF148Q9UQR1 794 aa15.26■□□□□ 0.03
CDT1-201ENST00000301019 CES2O00748 559 aa15.26■□□□□ 0.03
CDT1-201ENST00000301019 ASMTLO95671 621 aa15.26■□□□□ 0.03
CDT1-201ENST00000301019 ETS1P14921 441 aa15.26■□□□□ 0.03
CDT1-201ENST00000301019 ZNF24P17028 368 aa15.26■□□□□ 0.03
CDT1-201ENST00000301019 MLH1P40692 756 aa15.26■□□□□ 0.03
CDT1-201ENST00000301019 ARFIP2P53365 341 aa15.26■□□□□ 0.03
CDT1-201ENST00000301019 ALDH18A1P54886 795 aaKnown RBP15.26■□□□□ 0.03
CDT1-201ENST00000301019 IRX4P78413 519 aa15.26■□□□□ 0.03
CDT1-201ENST00000301019 ITPK1Q13572 414 aa15.26■□□□□ 0.03
CDT1-201ENST00000301019 COG2Q14746 738 aa15.26■□□□□ 0.03
CDT1-201ENST00000301019 TRIP10Q15642 601 aa15.26■□□□□ 0.03
CDT1-201ENST00000301019 SMAD1Q15797 465 aaKnown RBP15.26■□□□□ 0.03
CDT1-201ENST00000301019 MAP7D1Q3KQU3 841 aa15.26■□□□□ 0.03
CDT1-201ENST00000301019 C10orf76Q5T2E6 689 aa15.26■□□□□ 0.03
CDT1-201ENST00000301019 RIC8AQ9NPQ8 531 aa15.26■□□□□ 0.03
CDT1-201ENST00000301019 TMOD2Q9NZR1 351 aa15.26■□□□□ 0.03
CDT1-201ENST00000301019 MTUS1Q9ULD2 1270 aa15.26■□□□□ 0.03
CDT1-201ENST00000301019 R3HDM2Q9Y2K5 976 aaKnown RBP15.26■□□□□ 0.03
CDT1-201ENST00000301019 CDH16O75309 829 aa15.25■□□□□ 0.03
CDT1-201ENST00000301019 ATF2P15336 505 aa15.25■□□□□ 0.03
CDT1-201ENST00000301019 VARSP26640 1264 aaKnown RBP15.25■□□□□ 0.03
CDT1-201ENST00000301019 MSX2P35548 267 aaPredicted RBP15.25■□□□□ 0.03
CDT1-201ENST00000301019 RXRGP48443 463 aa15.25■□□□□ 0.03
CDT1-201ENST00000301019 ASPHQ12797 758 aa15.25■□□□□ 0.03
CDT1-201ENST00000301019 PPP6R3Q5H9R7 873 aaPredicted RBP15.25■□□□□ 0.03
CDT1-201ENST00000301019 GRAMD4Q6IC98 578 aa15.25■□□□□ 0.03
CDT1-201ENST00000301019 CLEC10AQ8IUN9 316 aa15.25■□□□□ 0.03
CDT1-201ENST00000301019 CCDC65Q8IXS2 484 aa15.25■□□□□ 0.03
CDT1-201ENST00000301019 GSDMBQ8TAX9 411 aa15.25■□□□□ 0.03
CDT1-201ENST00000301019 NSL1Q96IY1 281 aa15.25■□□□□ 0.03
CDT1-201ENST00000301019 TMEM120AQ9BXJ8 343 aa15.25■□□□□ 0.03
CDT1-201ENST00000301019 C10orf88Q9H8K7 445 aa15.25■□□□□ 0.03
CDT1-201ENST00000301019 LARSQ9P2J5 1176 aaKnown RBP15.25■□□□□ 0.03
CDT1-201ENST00000301019 KANSL3Q9P2N6 904 aa15.25■□□□□ 0.03
CDT1-201ENST00000301019 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.25■□□□□ 0.03
CDT1-201ENST00000301019 ARFGEF2Q9Y6D5 1785 aa15.25■□□□□ 0.03
CDT1-201ENST00000301019 A0A1B0GTW7 788 aa15.25■□□□□ 0.03
CDT1-201ENST00000301019 GCNT3O95395 438 aa15.25■□□□□ 0.03
CDT1-201ENST00000301019 STT3AP46977 705 aa15.25■□□□□ 0.03
CDT1-201ENST00000301019 TMCO4Q5TGY1 634 aa15.25■□□□□ 0.03
CDT1-201ENST00000301019 USP17L6PQ6QN14 398 aa15.25■□□□□ 0.03
CDT1-201ENST00000301019 RIN3Q8TB24 985 aa15.25■□□□□ 0.03
CDT1-201ENST00000301019 CNBD2Q96M20 576 aa15.25■□□□□ 0.03
CDT1-201ENST00000301019 PANX3Q96QZ0 392 aa15.25■□□□□ 0.03
CDT1-201ENST00000301019 RBM15Q96T37 977 aaKnown RBP eCLIP15.25■□□□□ 0.039e-8■■■■□ 26.1
CDT1-201ENST00000301019 HERPUD2Q9BSE4 406 aa15.25■□□□□ 0.03
CDT1-201ENST00000301019 EDEM3Q9BZQ6 932 aa15.25■□□□□ 0.03
CDT1-201ENST00000301019 KIAA1586Q9HCI6 787 aa15.25■□□□□ 0.03
CDT1-201ENST00000301019 ANLNQ9NQW6 1124 aa15.25■□□□□ 0.03
CDT1-201ENST00000301019 PARP2Q9UGN5 583 aa15.25■□□□□ 0.03
CDT1-201ENST00000301019 STARD13Q9Y3M8 1113 aa15.25■□□□□ 0.03
CDT1-201ENST00000301019 TJP1Q07157 1748 aa15.24■□□□□ 0.03
CDT1-201ENST00000301019 SPTLC1O15269 473 aa15.24■□□□□ 0.03
CDT1-201ENST00000301019 GAS8O95995 478 aa15.24■□□□□ 0.03
CDT1-201ENST00000301019 IFNB1P01574 187 aa15.24■□□□□ 0.03
CDT1-201ENST00000301019 TROVE2P10155 538 aaKnown RBP eCLIP15.24■□□□□ 0.03
CDT1-201ENST00000301019 MYL2P10916 166 aa15.24■□□□□ 0.03
CDT1-201ENST00000301019 RFC4P35249 363 aa15.24■□□□□ 0.03
CDT1-201ENST00000301019 NAA20P61599 178 aa15.24■□□□□ 0.03
CDT1-201ENST00000301019 PSMC6P62333 389 aa15.24■□□□□ 0.03
CDT1-201ENST00000301019 NCCRP1Q6ZVX7 275 aaPredicted RBP15.24■□□□□ 0.03
CDT1-201ENST00000301019 NME8Q8N427 588 aa15.24■□□□□ 0.03
CDT1-201ENST00000301019 DNAJC19Q96DA6 116 aa15.24■□□□□ 0.03
CDT1-201ENST00000301019 NR1H4Q96RI1 486 aaPredicted RBP15.24■□□□□ 0.03
CDT1-201ENST00000301019 MAK16Q9BXY0 300 aaKnown RBP15.24■□□□□ 0.03
CDT1-201ENST00000301019 IQCGQ9H095 443 aaKnown RBP15.24■□□□□ 0.03
CDT1-201ENST00000301019 IL17RBQ9NRM6 502 aa15.24■□□□□ 0.03
CDT1-201ENST00000301019 FOXN3O00409 490 aaPredicted RBP15.24■□□□□ 0.03
CDT1-201ENST00000301019 TP73O15350 636 aa15.24■□□□□ 0.03
CDT1-201ENST00000301019 VIL1P09327 827 aaKnown RBP15.24■□□□□ 0.03
CDT1-201ENST00000301019 NFKBIAP25963 317 aa15.24■□□□□ 0.03
CDT1-201ENST00000301019 TNFAIP8L3Q5GJ75 292 aa15.24■□□□□ 0.03
CDT1-201ENST00000301019 CLEC4GQ6UXB4 293 aa15.24■□□□□ 0.03
CDT1-201ENST00000301019 SFR1Q86XK3 245 aa15.24■□□□□ 0.03
CDT1-201ENST00000301019 SLC13A5Q86YT5 568 aaPredicted RBP15.24■□□□□ 0.03
CDT1-201ENST00000301019 ZFPM1Q8IX07 1006 aa15.24■□□□□ 0.03
CDT1-201ENST00000301019 RBM15BQ8NDT2 890 aaKnown RBP15.24■□□□□ 0.03
CDT1-201ENST00000301019 KAT5Q92993 513 aa15.24■□□□□ 0.03
CDT1-201ENST00000301019 ROPN1BQ9BZX4 212 aaPredicted RBP15.24■□□□□ 0.03
CDT1-201ENST00000301019 ROPN1Q9HAT0 212 aaPredicted RBP15.24■□□□□ 0.03
CDT1-201ENST00000301019 TFCP2L1Q9NZI6 479 aa15.24■□□□□ 0.03
CDT1-201ENST00000301019 BTBD7Q9P203 1132 aa15.24■□□□□ 0.03
CDT1-201ENST00000301019 TUBGCP4Q9UGJ1 667 aa15.24■□□□□ 0.03
CDT1-201ENST00000301019 TMA7Q9Y2S6 64 aaKnown RBP15.24■□□□□ 0.03
CDT1-201ENST00000301019 PCDHA3Q9Y5H8 950 aa15.24■□□□□ 0.03
CDT1-201ENST00000301019 TSPY3P0CV98 308 aa15.24■□□□□ 0.03
CDT1-201ENST00000301019 TSPY8P0CW00 308 aa15.24■□□□□ 0.03
CDT1-201ENST00000301019 CDK4P11802 303 aa15.24■□□□□ 0.03
CDT1-201ENST00000301019 IL6STP40189 918 aaPredicted RBP15.24■□□□□ 0.03
CDT1-201ENST00000301019 SLC25A3Q00325 362 aa15.24■□□□□ 0.03
CDT1-201ENST00000301019 MKRN3Q13064 507 aaKnown RBP15.24■□□□□ 0.03
CDT1-201ENST00000301019 PPP2R5BQ15173 497 aa15.24■□□□□ 0.03
CDT1-201ENST00000301019 CYTH1Q15438 398 aa15.24■□□□□ 0.03
CDT1-201ENST00000301019 TCHHL1Q5QJ38 904 aaPredicted RBP15.24■□□□□ 0.03
CDT1-201ENST00000301019 KLHDC10Q6PID8 442 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms