RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 EIF2AQ9BY44 585 aaKnown RBP16.84■□□□□ 0.29
HERPUD1-201ENST00000300302 XYLT2Q9H1B5 865 aa16.84■□□□□ 0.29
HERPUD1-201ENST00000300302 ISCUQ9H1K1 167 aa16.84■□□□□ 0.29
HERPUD1-201ENST00000300302 ITGA11Q9UKX5 1188 aa16.84■□□□□ 0.29
HERPUD1-201ENST00000300302 PCDHGC5Q9Y5F6 944 aa16.84■□□□□ 0.29
HERPUD1-201ENST00000300302 SAR1BQ9Y6B6 198 aa16.84■□□□□ 0.29
HERPUD1-201ENST00000300302 CDY2AQ9Y6F7 541 aa16.84■□□□□ 0.29
HERPUD1-201ENST00000300302 ITGB3P05106 788 aa16.83■□□□□ 0.28
HERPUD1-201ENST00000300302 INHAP05111 366 aa16.83■□□□□ 0.28
HERPUD1-201ENST00000300302 AMPD2Q01433 879 aa16.83■□□□□ 0.28
HERPUD1-201ENST00000300302 FMO1Q01740 532 aa16.83■□□□□ 0.28
HERPUD1-201ENST00000300302 WHAMMP3Q1A5X7 153 aa16.83■□□□□ 0.28
HERPUD1-201ENST00000300302 ZNF667Q5HYK9 610 aa16.83■□□□□ 0.28
HERPUD1-201ENST00000300302 PALB2Q86YC2 1186 aa16.83■□□□□ 0.28
HERPUD1-201ENST00000300302 DNAJC5GQ8N7S2 189 aa16.83■□□□□ 0.28
HERPUD1-201ENST00000300302 DDX1Q92499 740 aaKnown RBP16.83■□□□□ 0.28
HERPUD1-201ENST00000300302 KIF12Q96FN5 646 aa16.83■□□□□ 0.28
HERPUD1-201ENST00000300302 HMX1Q9NP08 348 aaPredicted RBP16.83■□□□□ 0.28
HERPUD1-201ENST00000300302 ACP6Q9NPH0 428 aa16.83■□□□□ 0.28
HERPUD1-201ENST00000300302 SNTG2Q9NY99 539 aa16.83■□□□□ 0.28
HERPUD1-201ENST00000300302 SIX4Q9UIU6 781 aa16.83■□□□□ 0.28
HERPUD1-201ENST00000300302 PTCH2Q9Y6C5 1203 aa16.83■□□□□ 0.28
HERPUD1-201ENST00000300302 UMODL1Q5DID0 1318 aa16.83■□□□□ 0.28
HERPUD1-201ENST00000300302 FTLP02792 175 aaPredicted RBP16.82■□□□□ 0.28
HERPUD1-201ENST00000300302 P4HA1P13674 534 aa16.82■□□□□ 0.28
HERPUD1-201ENST00000300302 ACLYP53396 1101 aa16.82■□□□□ 0.28
HERPUD1-201ENST00000300302 PTPN11Q06124 597 aaPredicted RBP16.82■□□□□ 0.28
HERPUD1-201ENST00000300302 PTGISQ16647 500 aa16.82■□□□□ 0.28
HERPUD1-201ENST00000300302 RBBP8NLQ8NC74 664 aaPredicted RBP16.82■□□□□ 0.28
HERPUD1-201ENST00000300302 RFFLQ8WZ73 363 aa16.82■□□□□ 0.28
HERPUD1-201ENST00000300302 CALR3Q96L12 384 aaKnown RBP16.82■□□□□ 0.28
HERPUD1-201ENST00000300302 SNX27Q96L92 541 aa16.82■□□□□ 0.28
HERPUD1-201ENST00000300302 CARD6Q9BX69 1037 aa16.82■□□□□ 0.28
HERPUD1-201ENST00000300302 DPP3Q9NY33 737 aa16.82■□□□□ 0.28
HERPUD1-201ENST00000300302 TAS2R14Q9NYV8 317 aa16.82■□□□□ 0.28
HERPUD1-201ENST00000300302 CITO14578 2027 aa16.82■□□□□ 0.28
HERPUD1-201ENST00000300302 NCANO14594 1321 aa16.82■□□□□ 0.28
HERPUD1-201ENST00000300302 MOXD2PA6NHM9 499 aa16.82■□□□□ 0.28
HERPUD1-201ENST00000300302 PALMO75781 387 aa16.82■□□□□ 0.28
HERPUD1-201ENST00000300302 ABCB4P21439 1286 aa16.82■□□□□ 0.28
HERPUD1-201ENST00000300302 GRK4P32298 578 aa16.82■□□□□ 0.28
HERPUD1-201ENST00000300302 RBP5P82980 135 aa16.82■□□□□ 0.28
HERPUD1-201ENST00000300302 ITGA7Q13683 1181 aa16.82■□□□□ 0.28
HERPUD1-201ENST00000300302 DNAAF5Q86Y56 855 aa16.82■□□□□ 0.28
HERPUD1-201ENST00000300302 CEP112Q8N8E3 955 aa16.82■□□□□ 0.28
HERPUD1-201ENST00000300302 GLT1D1Q96MS3 346 aa16.82■□□□□ 0.28
HERPUD1-201ENST00000300302 TSPAN18Q96SJ8 248 aa16.82■□□□□ 0.28
HERPUD1-201ENST00000300302 PCDHB18PQ96TA0 734 aa16.82■□□□□ 0.28
HERPUD1-201ENST00000300302 TSEN34Q9BSV6 310 aaKnown RBP16.82■□□□□ 0.28
HERPUD1-201ENST00000300302 PDCL3Q9H2J4 239 aa16.82■□□□□ 0.28
HERPUD1-201ENST00000300302 VRTNQ9H8Y1 702 aa16.82■□□□□ 0.28
HERPUD1-201ENST00000300302 HTTP42858 3142 aa16.81■□□□□ 0.28
HERPUD1-201ENST00000300302 RALGAPA2Q2PPJ7 1873 aa16.81■□□□□ 0.28
HERPUD1-201ENST00000300302 RPS6KA5O75582 802 aa16.81■□□□□ 0.28
HERPUD1-201ENST00000300302 PRLRP16471 622 aa16.81■□□□□ 0.28
HERPUD1-201ENST00000300302 GNA15P30679 374 aa16.81■□□□□ 0.28
HERPUD1-201ENST00000300302 WDR72Q3MJ13 1102 aa16.81■□□□□ 0.28
HERPUD1-201ENST00000300302 SCARA3Q6AZY7 606 aa16.81■□□□□ 0.28
HERPUD1-201ENST00000300302 FAM228AQ86W67 206 aa16.81■□□□□ 0.28
HERPUD1-201ENST00000300302 RHOT2Q8IXI1 618 aa16.81■□□□□ 0.28
HERPUD1-201ENST00000300302 SYCE1Q8N0S2 351 aa16.81■□□□□ 0.28
HERPUD1-201ENST00000300302 UBR7Q8N806 425 aa16.81■□□□□ 0.28
HERPUD1-201ENST00000300302 SENP6Q9GZR1 1112 aaPredicted RBP16.81■□□□□ 0.28
HERPUD1-201ENST00000300302 THAP2Q9H0W7 228 aa16.81■□□□□ 0.28
HERPUD1-201ENST00000300302 NXF3Q9H4D5 531 aaKnown RBP16.81■□□□□ 0.28
HERPUD1-201ENST00000300302 CISHQ9NSE2 258 aa16.81■□□□□ 0.28
HERPUD1-201ENST00000300302 NXF1Q9UBU9 619 aaKnown RBP16.81■□□□□ 0.28
HERPUD1-201ENST00000300302 NOD1Q9Y239 953 aa16.81■□□□□ 0.28
HERPUD1-201ENST00000300302 NOC2LQ9Y3T9 749 aaKnown RBP16.81■□□□□ 0.28
HERPUD1-201ENST00000300302 GRIN2DO15399 1336 aa16.8■□□□□ 0.28
HERPUD1-201ENST00000300302 ASPAP45381 313 aa16.8■□□□□ 0.28
HERPUD1-201ENST00000300302 GPC5P78333 572 aa16.8■□□□□ 0.28
HERPUD1-201ENST00000300302 TWF2Q6IBS0 349 aaKnown RBP16.8■□□□□ 0.28
HERPUD1-201ENST00000300302 TRIM72Q6ZMU5 477 aa16.8■□□□□ 0.28
HERPUD1-201ENST00000300302 CNTN3Q9P232 1028 aa16.8■□□□□ 0.28
HERPUD1-201ENST00000300302 SNX12Q9UMY4 172 aa16.8■□□□□ 0.28
HERPUD1-201ENST00000300302 AGAP1Q9UPQ3 857 aa16.8■□□□□ 0.28
HERPUD1-201ENST00000300302 HES2Q9Y543 173 aa16.8■□□□□ 0.28
HERPUD1-201ENST00000300302 GRID2IPA4D2P6 1211 aa16.8■□□□□ 0.28
HERPUD1-201ENST00000300302 EFCAB8A8MWE9 144 aa16.8■□□□□ 0.28
HERPUD1-201ENST00000300302 RECQL4O94761 1208 aa16.8■□□□□ 0.28
HERPUD1-201ENST00000300302 STAU1O95793 577 aaKnown RBP16.8■□□□□ 0.28
HERPUD1-201ENST00000300302 CTSHP09668 335 aa16.8■□□□□ 0.28
HERPUD1-201ENST00000300302 TCP1P17987 556 aaKnown RBP16.8■□□□□ 0.28
HERPUD1-201ENST00000300302 CD58P19256 250 aa16.8■□□□□ 0.28
HERPUD1-201ENST00000300302 POLR2BP30876 1174 aaKnown RBP16.8■□□□□ 0.28
HERPUD1-201ENST00000300302 THPOP40225 353 aa16.8■□□□□ 0.28
HERPUD1-201ENST00000300302 ZNF132P52740 706 aa16.8■□□□□ 0.28
HERPUD1-201ENST00000300302 MYO1EQ12965 1108 aa16.8■□□□□ 0.28
HERPUD1-201ENST00000300302 PTK7Q13308 1070 aa16.8■□□□□ 0.28
HERPUD1-201ENST00000300302 CLEC16AQ2KHT3 1053 aa16.8■□□□□ 0.28
HERPUD1-201ENST00000300302 UBXN11Q5T124 520 aa16.8■□□□□ 0.28
HERPUD1-201ENST00000300302 ACAD10Q6JQN1 1059 aa16.8■□□□□ 0.28
HERPUD1-201ENST00000300302 PPP1R2P3Q6NXS1 205 aa16.8■□□□□ 0.28
HERPUD1-201ENST00000300302 BEST2Q8NFU1 509 aa16.8■□□□□ 0.28
HERPUD1-201ENST00000300302 CXorf38Q8TB03 319 aa16.8■□□□□ 0.28
HERPUD1-201ENST00000300302 SLC35G2Q8TBE7 412 aa16.8■□□□□ 0.28
HERPUD1-201ENST00000300302 SH3TC2Q8TF17 1288 aa16.8■□□□□ 0.28
HERPUD1-201ENST00000300302 HPDLQ96IR7 371 aa16.8■□□□□ 0.28
HERPUD1-201ENST00000300302 APOL6Q9BWW8 343 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms