RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 CCNE1P24864 410 aa22.89■■□□□ 1.25
SMCO4-201ENST00000298966 RFC5P40937 340 aa22.89■■□□□ 1.25
SMCO4-201ENST00000298966 HTR4Q13639 388 aa22.89■■□□□ 1.25
SMCO4-201ENST00000298966 RSPO4Q2I0M5 234 aaPredicted RBP22.89■■□□□ 1.25
SMCO4-201ENST00000298966 UBXN11Q5T124 520 aa22.89■■□□□ 1.25
SMCO4-201ENST00000298966 SPATA31D4Q6ZUB0 917 aa22.89■■□□□ 1.25
SMCO4-201ENST00000298966 PALB2Q86YC2 1186 aa22.89■■□□□ 1.25
SMCO4-201ENST00000298966 COLGALT2Q8IYK4 626 aa22.89■■□□□ 1.25
SMCO4-201ENST00000298966 RNF168Q8IYW5 571 aaPredicted RBP22.89■■□□□ 1.25
SMCO4-201ENST00000298966 NELFBQ8WX92 580 aa22.89■■□□□ 1.25
SMCO4-201ENST00000298966 KIFAP3Q92845 792 aa22.89■■□□□ 1.25
SMCO4-201ENST00000298966 CEP170P1Q96L14 293 aa22.89■■□□□ 1.25
SMCO4-201ENST00000298966 FOXQ1Q9C009 403 aa22.89■■□□□ 1.25
SMCO4-201ENST00000298966 ZDHHC7Q9NXF8 308 aa22.89■■□□□ 1.25
SMCO4-201ENST00000298966 NUMBLQ9Y6R0 609 aa22.89■■□□□ 1.25
SMCO4-201ENST00000298966 ACACBO00763 2458 aa22.89■■□□□ 1.25
SMCO4-201ENST00000298966 EIF3DO15371 548 aaKnown RBP eCLIP22.88■■□□□ 1.25
SMCO4-201ENST00000298966 AP5Z1O43299 807 aa22.88■■□□□ 1.25
SMCO4-201ENST00000298966 GAS2O43903 313 aaKnown RBP22.88■■□□□ 1.25
SMCO4-201ENST00000298966 PAPLNO95428 1278 aa22.88■■□□□ 1.25
SMCO4-201ENST00000298966 C1RP00736 705 aa22.88■■□□□ 1.25
SMCO4-201ENST00000298966 DSG1Q02413 1049 aa22.88■■□□□ 1.25
SMCO4-201ENST00000298966 LRRC63Q05C16 580 aa22.88■■□□□ 1.25
SMCO4-201ENST00000298966 SPAG1Q07617 926 aa22.88■■□□□ 1.25
SMCO4-201ENST00000298966 TPD52L1Q16890 204 aaPredicted RBP22.88■■□□□ 1.25
SMCO4-201ENST00000298966 KLHL10Q6JEL2 608 aa22.88■■□□□ 1.25
SMCO4-201ENST00000298966 PPP4R3CPQ6ZMV5 832 aa22.88■■□□□ 1.25
SMCO4-201ENST00000298966 SMYD4Q8IYR2 804 aaPredicted RBP22.88■■□□□ 1.25
SMCO4-201ENST00000298966 SUMF1Q8NBK3 374 aa22.88■■□□□ 1.25
SMCO4-201ENST00000298966 SLC7A3Q8WY07 619 aa22.88■■□□□ 1.25
SMCO4-201ENST00000298966 BORCS6Q96GS4 357 aa22.88■■□□□ 1.25
SMCO4-201ENST00000298966 PRKD2Q9BZL6 878 aa22.88■■□□□ 1.25
SMCO4-201ENST00000298966 SLC39A2Q9NP94 309 aa22.88■■□□□ 1.25
SMCO4-201ENST00000298966 NCDNQ9UBB6 729 aa22.88■■□□□ 1.25
SMCO4-201ENST00000298966 CTNND2Q9UQB3 1225 aa22.88■■□□□ 1.25
SMCO4-201ENST00000298966 TDRD15B5MCY1 1934 aaKnown RBP22.88■■□□□ 1.25
SMCO4-201ENST00000298966 DNAH14Q0VDD8 3507 aa22.87■■□□□ 1.25
SMCO4-201ENST00000298966 ZBTB39O15060 712 aa22.87■■□□□ 1.25
SMCO4-201ENST00000298966 FGFR1OPO95684 399 aaKnown RBP22.87■■□□□ 1.25
SMCO4-201ENST00000298966 STARD6P59095 220 aa22.87■■□□□ 1.25
SMCO4-201ENST00000298966 PLA2G4FQ68DD2 849 aa22.87■■□□□ 1.25
SMCO4-201ENST00000298966 CENPPQ6IPU0 288 aa22.87■■□□□ 1.25
SMCO4-201ENST00000298966 TSG101Q99816 390 aa22.87■■□□□ 1.25
SMCO4-201ENST00000298966 ZHX3Q9H4I2 956 aa22.87■■□□□ 1.25
SMCO4-201ENST00000298966 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.87■■□□□ 1.25
SMCO4-201ENST00000298966 NFE2L3Q9Y4A8 694 aa22.87■■□□□ 1.25
SMCO4-201ENST00000298966 ZFP37Q9Y6Q3 630 aaPredicted RBP22.87■■□□□ 1.25
SMCO4-201ENST00000298966 NPHP3-ACAD11A0A0J9YXS1 232 aa22.86■■□□□ 1.25
SMCO4-201ENST00000298966 TGM5O43548 720 aa22.86■■□□□ 1.25
SMCO4-201ENST00000298966 USO1O60763 962 aaKnown RBP22.86■■□□□ 1.25
SMCO4-201ENST00000298966 HIP1RO75146 1068 aa22.86■■□□□ 1.25
SMCO4-201ENST00000298966 EFEMP2O95967 443 aa22.86■■□□□ 1.25
SMCO4-201ENST00000298966 SRGAP2CP0DJJ0 459 aa22.86■■□□□ 1.25
SMCO4-201ENST00000298966 GLULP15104 373 aa22.86■■□□□ 1.25
SMCO4-201ENST00000298966 SDHBP21912 280 aa22.86■■□□□ 1.25
SMCO4-201ENST00000298966 HOXA11P31270 313 aaPredicted RBP22.86■■□□□ 1.25
SMCO4-201ENST00000298966 BMT2Q1RMZ1 405 aa22.86■■□□□ 1.25
SMCO4-201ENST00000298966 SFR1Q86XK3 245 aa22.86■■□□□ 1.25
SMCO4-201ENST00000298966 MYCT1Q8N699 235 aa22.86■■□□□ 1.25
SMCO4-201ENST00000298966 PSPC1Q8WXF1 523 aaKnown RBP22.86■■□□□ 1.25
SMCO4-201ENST00000298966 CNTNAP3BQ96NU0 1288 aa22.86■■□□□ 1.25
SMCO4-201ENST00000298966 COLEC11Q9BWP8 271 aa22.86■■□□□ 1.25
SMCO4-201ENST00000298966 BCO2Q9BYV7 579 aa22.86■■□□□ 1.25
SMCO4-201ENST00000298966 CNTNAP3Q9BZ76 1288 aa22.86■■□□□ 1.25
SMCO4-201ENST00000298966 MINDY3Q9H8M7 445 aa22.86■■□□□ 1.25
SMCO4-201ENST00000298966 MRPL44Q9H9J2 332 aaKnown RBP22.86■■□□□ 1.25
SMCO4-201ENST00000298966 H0YCG3 227 aa22.85■■□□□ 1.25
SMCO4-201ENST00000298966 SPTLC1O15269 473 aa22.85■■□□□ 1.25
SMCO4-201ENST00000298966 LAMTOR5O43504 91 aa22.85■■□□□ 1.25
SMCO4-201ENST00000298966 PLS3P13797 630 aa22.85■■□□□ 1.25
SMCO4-201ENST00000298966 CDC25BP30305 580 aa22.85■■□□□ 1.25
SMCO4-201ENST00000298966 ZNF75DP51815 510 aa22.85■■□□□ 1.25
SMCO4-201ENST00000298966 DSC1Q08554 894 aa22.85■■□□□ 1.25
SMCO4-201ENST00000298966 RAD51AP2Q09MP3 1159 aa22.85■■□□□ 1.25
SMCO4-201ENST00000298966 MAPK7Q13164 816 aa22.85■■□□□ 1.25
SMCO4-201ENST00000298966 ZNF528Q3MIS6 628 aa22.85■■□□□ 1.25
SMCO4-201ENST00000298966 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.85■■□□□ 1.25
SMCO4-201ENST00000298966 FAM114A1Q8IWE2 563 aa22.85■■□□□ 1.25
SMCO4-201ENST00000298966 GPR161Q8N6U8 529 aaKnown RBP22.85■■□□□ 1.25
SMCO4-201ENST00000298966 SMG8Q8ND04 991 aaKnown RBP22.85■■□□□ 1.25
SMCO4-201ENST00000298966 ANKRD20A12PQ8NF67 263 aa22.85■■□□□ 1.25
SMCO4-201ENST00000298966 PRPF31Q8WWY3 499 aaKnown RBP22.85■■□□□ 1.25
SMCO4-201ENST00000298966 GAD1Q99259 594 aa22.85■■□□□ 1.25
SMCO4-201ENST00000298966 HSD3B7Q9H2F3 369 aa22.85■■□□□ 1.25
SMCO4-201ENST00000298966 ST6GALNAC4Q9H4F1 302 aa22.85■■□□□ 1.25
SMCO4-201ENST00000298966 CHST7Q9NS84 486 aa22.85■■□□□ 1.25
SMCO4-201ENST00000298966 SPATA6Q9NWH7 488 aaPredicted RBP22.85■■□□□ 1.25
SMCO4-201ENST00000298966 FBXO4Q9UKT5 387 aa22.85■■□□□ 1.25
SMCO4-201ENST00000298966 PCDHB13Q9Y5F0 798 aa22.85■■□□□ 1.25
SMCO4-201ENST00000298966 DOCK6Q96HP0 2047 aa22.85■■□□□ 1.25
SMCO4-201ENST00000298966 ARL5CA6NH57 179 aa22.84■■□□□ 1.25
SMCO4-201ENST00000298966 CBFA2T2O43439 604 aa22.84■■□□□ 1.25
SMCO4-201ENST00000298966 LRRN2O75325 713 aa22.84■■□□□ 1.25
SMCO4-201ENST00000298966 ERLIN2O94905 339 aa22.84■■□□□ 1.25
SMCO4-201ENST00000298966 ZNF18P17022 549 aa22.84■■□□□ 1.25
SMCO4-201ENST00000298966 FSHRP23945 695 aa22.84■■□□□ 1.25
SMCO4-201ENST00000298966 MLH1P40692 756 aa22.84■■□□□ 1.25
SMCO4-201ENST00000298966 NPEPPSP55786 919 aa22.84■■□□□ 1.25
SMCO4-201ENST00000298966 PLCB2Q00722 1185 aa22.84■■□□□ 1.25
SMCO4-201ENST00000298966 CREMQ03060 361 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 159.7 ms