RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 LSM14BQ9BX40 385 aaKnown RBP19.16■□□□□ 0.66
CCDC78-201ENST00000293889 RNF216Q9NWF9 866 aaPredicted RBP19.16■□□□□ 0.66
CCDC78-201ENST00000293889 A0A1W2PPC1 479 aa19.15■□□□□ 0.66
CCDC78-201ENST00000293889 UPP2O95045 317 aa19.15■□□□□ 0.66
CCDC78-201ENST00000293889 ITGB3P05106 788 aa19.15■□□□□ 0.66
CCDC78-201ENST00000293889 GATMP50440 423 aa19.15■□□□□ 0.66
CCDC78-201ENST00000293889 NOMO2Q5JPE7 1267 aa19.15■□□□□ 0.66
CCDC78-201ENST00000293889 TRIM65Q6PJ69 517 aa19.15■□□□□ 0.66
CCDC78-201ENST00000293889 TMC6Q7Z403 805 aa19.15■□□□□ 0.66
CCDC78-201ENST00000293889 TMCO2Q7Z6W1 182 aaPredicted RBP19.15■□□□□ 0.66
CCDC78-201ENST00000293889 DRC7Q8IY82 874 aa19.15■□□□□ 0.66
CCDC78-201ENST00000293889 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.15■□□□□ 0.664e-20■■■■■ 173.9
CCDC78-201ENST00000293889 FAM207AQ9NSI2 230 aaPredicted RBP19.15■□□□□ 0.66
CCDC78-201ENST00000293889 SLC38A7Q9NVC3 462 aa19.15■□□□□ 0.66
CCDC78-201ENST00000293889 ITGA11Q9UKX5 1188 aa19.15■□□□□ 0.66
CCDC78-201ENST00000293889 SLC4A7Q9Y6M7 1214 aa19.15■□□□□ 0.66
CCDC78-201ENST00000293889 ITIH6Q6UXX5 1313 aa19.15■□□□□ 0.66
CCDC78-201ENST00000293889 CTIFO43310 598 aaKnown RBP19.14■□□□□ 0.66
CCDC78-201ENST00000293889 XPOTO43592 962 aaKnown RBP19.14■□□□□ 0.66
CCDC78-201ENST00000293889 CYP3A5P20815 502 aa19.14■□□□□ 0.66
CCDC78-201ENST00000293889 POLR2BP30876 1174 aaKnown RBP19.14■□□□□ 0.66
CCDC78-201ENST00000293889 TRPC3Q13507 836 aa19.14■□□□□ 0.66
CCDC78-201ENST00000293889 TOP1MTQ969P6 601 aa19.14■□□□□ 0.66
CCDC78-201ENST00000293889 ELMO3Q96BJ8 720 aa19.14■□□□□ 0.66
CCDC78-201ENST00000293889 CASD1Q96PB1 797 aa19.14■□□□□ 0.66
CCDC78-201ENST00000293889 PI4K2AQ9BTU6 479 aa19.14■□□□□ 0.66
CCDC78-201ENST00000293889 MTIF3Q9H2K0 278 aaKnown RBP19.14■□□□□ 0.66
CCDC78-201ENST00000293889 GOLGA2P5Q9HBQ8 144 aa19.14■□□□□ 0.66
CCDC78-201ENST00000293889 SIX2Q9NPC8 291 aa19.14■□□□□ 0.66
CCDC78-201ENST00000293889 HOXA2O43364 376 aa19.14■□□□□ 0.65
CCDC78-201ENST00000293889 NOL4O94818 638 aa19.14■□□□□ 0.65
CCDC78-201ENST00000293889 KRT19P08727 400 aa19.14■□□□□ 0.65
CCDC78-201ENST00000293889 KCNJ6P48051 423 aa19.14■□□□□ 0.65
CCDC78-201ENST00000293889 MYL6P60660 151 aa19.14■□□□□ 0.65
CCDC78-201ENST00000293889 RBM10P98175 930 aaKnown RBP19.14■□□□□ 0.65
CCDC78-201ENST00000293889 GRIK3Q13003 919 aa19.14■□□□□ 0.65
CCDC78-201ENST00000293889 LRRC8AQ8IWT6 810 aa19.14■□□□□ 0.65
CCDC78-201ENST00000293889 ABI1Q8IZP0 508 aa19.14■□□□□ 0.65
CCDC78-201ENST00000293889 URGCPQ8TCY9 931 aa19.14■□□□□ 0.65
CCDC78-201ENST00000293889 PLCB1Q9NQ66 1216 aa19.14■□□□□ 0.65
CCDC78-201ENST00000293889 IMPACTQ9P2X3 320 aa19.14■□□□□ 0.65
CCDC78-201ENST00000293889 AGAP1Q9UPQ3 857 aa19.14■□□□□ 0.65
CCDC78-201ENST00000293889 GRXCR1A8MXD5 290 aa19.13■□□□□ 0.65
CCDC78-201ENST00000293889 EPHB6O15197 1021 aa19.13■□□□□ 0.65
CCDC78-201ENST00000293889 RBP5P82980 135 aa19.13■□□□□ 0.65
CCDC78-201ENST00000293889 LRMPQ12912 555 aa19.13■□□□□ 0.65
CCDC78-201ENST00000293889 C9orf57Q5W0N0 161 aa19.13■□□□□ 0.65
CCDC78-201ENST00000293889 NEK11Q8NG66 645 aa19.13■□□□□ 0.65
CCDC78-201ENST00000293889 TBC1D13Q9NVG8 400 aa19.13■□□□□ 0.65
CCDC78-201ENST00000293889 KANSL3Q9P2N6 904 aa19.13■□□□□ 0.65
CCDC78-201ENST00000293889 ANO9A1A5B4 782 aa19.12■□□□□ 0.65
CCDC78-201ENST00000293889 PPEF2O14830 753 aa19.12■□□□□ 0.65
CCDC78-201ENST00000293889 ASS1P00966 412 aaKnown RBP19.12■□□□□ 0.65
CCDC78-201ENST00000293889 ATP2A2P16615 1042 aaKnown RBP19.12■□□□□ 0.65
CCDC78-201ENST00000293889 TBX2Q13207 712 aaPredicted RBP19.12■□□□□ 0.65
CCDC78-201ENST00000293889 KLHDC7AQ5VTJ3 777 aa19.12■□□□□ 0.65
CCDC78-201ENST00000293889 SPOPLQ6IQ16 392 aa19.12■□□□□ 0.65
CCDC78-201ENST00000293889 PHLDB3Q6NSJ2 640 aa19.12■□□□□ 0.65
CCDC78-201ENST00000293889 XYLT2Q9H1B5 865 aa19.12■□□□□ 0.65
CCDC78-201ENST00000293889 GANQ9H2C0 597 aa19.12■□□□□ 0.65
CCDC78-201ENST00000293889 CACNG4Q9UBN1 327 aa19.12■□□□□ 0.65
CCDC78-201ENST00000293889 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.12■□□□□ 0.65
CCDC78-201ENST00000293889 TBKBP1A7MCY6 615 aa19.11■□□□□ 0.65
CCDC78-201ENST00000293889 PIRO00625 290 aa19.11■□□□□ 0.65
CCDC78-201ENST00000293889 DGKIO75912 1065 aa19.11■□□□□ 0.65
CCDC78-201ENST00000293889 TRIM21P19474 475 aaKnown RBP19.11■□□□□ 0.65
CCDC78-201ENST00000293889 LRPAP1P30533 357 aa19.11■□□□□ 0.65
CCDC78-201ENST00000293889 GSDMDP57764 484 aa19.11■□□□□ 0.65
CCDC78-201ENST00000293889 SGSM1Q2NKQ1 1148 aa19.11■□□□□ 0.65
CCDC78-201ENST00000293889 WDR44Q5JSH3 913 aa19.11■□□□□ 0.65
CCDC78-201ENST00000293889 FAM117BQ6P1L5 589 aa19.11■□□□□ 0.65
CCDC78-201ENST00000293889 GJB7Q6PEY0 223 aa19.11■□□□□ 0.65
CCDC78-201ENST00000293889 ZNF280BQ86YH2 543 aa19.11■□□□□ 0.65
CCDC78-201ENST00000293889 ARHGEF19Q8IW93 802 aa19.11■□□□□ 0.65
CCDC78-201ENST00000293889 TATDN2Q93075 761 aa19.11■□□□□ 0.65
CCDC78-201ENST00000293889 SLC9A7Q96T83 725 aa19.11■□□□□ 0.65
CCDC78-201ENST00000293889 NUP58Q9BVL2 599 aa19.11■□□□□ 0.65
CCDC78-201ENST00000293889 TTYH3Q9C0H2 523 aa19.11■□□□□ 0.65
CCDC78-201ENST00000293889 APOBEC3GQ9HC16 384 aaKnown RBP19.11■□□□□ 0.65
CCDC78-201ENST00000293889 COL4A6Q14031 1691 aa19.11■□□□□ 0.65
CCDC78-201ENST00000293889 CASTOR2A6NHX0 329 aa19.11■□□□□ 0.65
CCDC78-201ENST00000293889 B4GALT3O60512 393 aa19.11■□□□□ 0.65
CCDC78-201ENST00000293889 ZC3H11AO75152 810 aaKnown RBP eCLIP19.11■□□□□ 0.65
CCDC78-201ENST00000293889 DDHD2O94830 711 aa19.11■□□□□ 0.65
CCDC78-201ENST00000293889 GYPCP04921 128 aa19.11■□□□□ 0.65
CCDC78-201ENST00000293889 UCHL3P15374 230 aa19.11■□□□□ 0.65
CCDC78-201ENST00000293889 RNASELQ05823 741 aaKnown RBP19.11■□□□□ 0.65
CCDC78-201ENST00000293889 TUSC3Q13454 348 aa19.11■□□□□ 0.65
CCDC78-201ENST00000293889 HERC6Q8IVU3 1022 aa19.11■□□□□ 0.65
CCDC78-201ENST00000293889 CCDC150Q8NCX0 1101 aa19.11■□□□□ 0.65
CCDC78-201ENST00000293889 PHOSPHO2Q8TCD6 241 aa19.11■□□□□ 0.65
CCDC78-201ENST00000293889 HPDLQ96IR7 371 aa19.11■□□□□ 0.65
CCDC78-201ENST00000293889 NT5C1BQ96P26 610 aa19.11■□□□□ 0.65
CCDC78-201ENST00000293889 APEX2Q9UBZ4 518 aa19.11■□□□□ 0.65
CCDC78-201ENST00000293889 AJAP1Q9UKB5 411 aaPredicted RBP19.11■□□□□ 0.65
CCDC78-201ENST00000293889 NUB1Q9Y5A7 615 aa19.11■□□□□ 0.65
CCDC78-201ENST00000293889 PAXBP1Q9Y5B6 917 aa19.11■□□□□ 0.65
CCDC78-201ENST00000293889 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.11■□□□□ 0.65
CCDC78-201ENST00000293889 TDRD15B5MCY1 1934 aaKnown RBP19.1■□□□□ 0.65
CCDC78-201ENST00000293889 FNDC1Q4ZHG4 1894 aaPredicted RBP19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms