RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 ZBTB45Q96K62 511 aaPredicted RBP18.02■□□□□ 0.47
CPSF4-201ENST00000292476 PSMB7Q99436 277 aa18.02■□□□□ 0.47
CPSF4-201ENST00000292476 PACSIN1Q9BY11 444 aa18.02■□□□□ 0.47
CPSF4-201ENST00000292476 PTPRHQ9HD43 1115 aa18.02■□□□□ 0.47
CPSF4-201ENST00000292476 KAT6AQ92794 2004 aa18.01■□□□□ 0.47
CPSF4-201ENST00000292476 A6NNZ2 444 aa18.01■□□□□ 0.47
CPSF4-201ENST00000292476 SHOX2O60902 331 aaPredicted RBP18.01■□□□□ 0.47
CPSF4-201ENST00000292476 VTNP04004 478 aa18.01■□□□□ 0.47
CPSF4-201ENST00000292476 MYCNP04198 464 aaPredicted RBP18.01■□□□□ 0.47
CPSF4-201ENST00000292476 H2AFZP0C0S5 128 aa18.01■□□□□ 0.47
CPSF4-201ENST00000292476 MCF2P10911 925 aa18.01■□□□□ 0.47
CPSF4-201ENST00000292476 TNNI1P19237 187 aa18.01■□□□□ 0.47
CPSF4-201ENST00000292476 ACOT2P49753 483 aa18.01■□□□□ 0.47
CPSF4-201ENST00000292476 ADAM17P78536 824 aa18.01■□□□□ 0.47
CPSF4-201ENST00000292476 TUBB8Q3ZCM7 444 aa18.01■□□□□ 0.47
CPSF4-201ENST00000292476 ZNF568Q3ZCX4 644 aa18.01■□□□□ 0.47
CPSF4-201ENST00000292476 TAF2Q6P1X5 1199 aa18.01■□□□□ 0.47
CPSF4-201ENST00000292476 H2AFVQ71UI9 128 aa18.01■□□□□ 0.47
CPSF4-201ENST00000292476 BRSK2Q8IWQ3 736 aa18.01■□□□□ 0.47
CPSF4-201ENST00000292476 FAM76AQ8TAV0 307 aa18.01■□□□□ 0.47
CPSF4-201ENST00000292476 PLEKHO2Q8TD55 490 aa18.01■□□□□ 0.47
CPSF4-201ENST00000292476 WHAMMQ8TF30 809 aa18.01■□□□□ 0.47
CPSF4-201ENST00000292476 PAWRQ96IZ0 340 aaKnown RBP18.01■□□□□ 0.47
CPSF4-201ENST00000292476 XPNPEP3Q9NQH7 507 aa18.01■□□□□ 0.47
CPSF4-201ENST00000292476 DNAJC12Q9UKB3 198 aa18.01■□□□□ 0.47
CPSF4-201ENST00000292476 NCANO14594 1321 aa18■□□□□ 0.47
CPSF4-201ENST00000292476 HSF2BPO75031 334 aa18■□□□□ 0.47
CPSF4-201ENST00000292476 SOX5P35711 763 aa18■□□□□ 0.47
CPSF4-201ENST00000292476 MNX1P50219 401 aaPredicted RBP18■□□□□ 0.47
CPSF4-201ENST00000292476 CRELD2Q6UXH1 353 aaPredicted RBP18■□□□□ 0.47
CPSF4-201ENST00000292476 ENOSF1Q7L5Y1 443 aa18■□□□□ 0.47
CPSF4-201ENST00000292476 UBE2Q1Q7Z7E8 422 aa18■□□□□ 0.47
CPSF4-201ENST00000292476 GPIHBP1Q8IV16 184 aa18■□□□□ 0.47
CPSF4-201ENST00000292476 PCSK9Q8NBP7 692 aaKnown RBP18■□□□□ 0.47
CPSF4-201ENST00000292476 TPCN2Q8NHX9 752 aa18■□□□□ 0.47
CPSF4-201ENST00000292476 LMO3Q8TAP4 145 aa18■□□□□ 0.47
CPSF4-201ENST00000292476 MS4A14Q96JA4 679 aa18■□□□□ 0.47
CPSF4-201ENST00000292476 CGRRF1Q99675 332 aa18■□□□□ 0.47
CPSF4-201ENST00000292476 ADPGKQ9BRR6 497 aa18■□□□□ 0.47
CPSF4-201ENST00000292476 RAB20Q9NX57 234 aa18■□□□□ 0.47
CPSF4-201ENST00000292476 PHACTR2O75167 634 aa17.99■□□□□ 0.47
CPSF4-201ENST00000292476 IL18RAPO95256 599 aa17.99■□□□□ 0.47
CPSF4-201ENST00000292476 CST5P28325 142 aaPredicted RBP17.99■□□□□ 0.47
CPSF4-201ENST00000292476 HOXC8P31273 242 aa17.99■□□□□ 0.47
CPSF4-201ENST00000292476 MFAP3P55082 362 aa17.99■□□□□ 0.47
CPSF4-201ENST00000292476 SMYD5Q6GMV2 418 aa17.99■□□□□ 0.47
CPSF4-201ENST00000292476 SV2AQ7L0J3 742 aa17.99■□□□□ 0.47
CPSF4-201ENST00000292476 ZBTB33Q86T24 672 aa17.99■□□□□ 0.47
CPSF4-201ENST00000292476 WDR49Q8IV35 697 aa17.99■□□□□ 0.47
CPSF4-201ENST00000292476 C1orf131Q8NDD1 294 aaKnown RBP17.99■□□□□ 0.47
CPSF4-201ENST00000292476 ZBTB10Q96DT7 871 aa17.99■□□□□ 0.47
CPSF4-201ENST00000292476 HAPLN2Q9GZV7 340 aa17.99■□□□□ 0.47
CPSF4-201ENST00000292476 SMARCAL1Q9NZC9 954 aa17.99■□□□□ 0.47
CPSF4-201ENST00000292476 EHD2Q9NZN4 543 aa17.99■□□□□ 0.47
CPSF4-201ENST00000292476 GOLGA6CA6NDK9 693 aa17.99■□□□□ 0.47
CPSF4-201ENST00000292476 F8VZ95 297 aa17.99■□□□□ 0.47
CPSF4-201ENST00000292476 CCDC188H7C350 402 aa17.99■□□□□ 0.47
CPSF4-201ENST00000292476 TULP1O00294 542 aaPredicted RBP17.99■□□□□ 0.47
CPSF4-201ENST00000292476 HEXIM1O94992 359 aaKnown RBP17.99■□□□□ 0.47
CPSF4-201ENST00000292476 EDN1P05305 212 aa17.99■□□□□ 0.47
CPSF4-201ENST00000292476 GOLGA6DP0CG33 693 aa17.99■□□□□ 0.47
CPSF4-201ENST00000292476 AXLP30530 894 aa17.99■□□□□ 0.47
CPSF4-201ENST00000292476 SLC7A5Q01650 507 aa17.99■□□□□ 0.47
CPSF4-201ENST00000292476 ZACNQ401N2 412 aa17.99■□□□□ 0.47
CPSF4-201ENST00000292476 WDR44Q5JSH3 913 aa17.99■□□□□ 0.47
CPSF4-201ENST00000292476 C15orf39Q6ZRI6 1047 aa17.99■□□□□ 0.47
CPSF4-201ENST00000292476 RSPH3Q86UC2 560 aa17.99■□□□□ 0.47
CPSF4-201ENST00000292476 ANKLE1Q8NAG6 615 aa17.99■□□□□ 0.47
CPSF4-201ENST00000292476 SLC30A5Q8TAD4 765 aa17.99■□□□□ 0.47
CPSF4-201ENST00000292476 NT5C1BQ96P26 610 aa17.99■□□□□ 0.47
CPSF4-201ENST00000292476 RUFY1Q96T51 708 aa17.99■□□□□ 0.47
CPSF4-201ENST00000292476 FAM49AQ9H0Q0 323 aaPredicted RBP17.99■□□□□ 0.47
CPSF4-201ENST00000292476 MINDY3Q9H8M7 445 aa17.99■□□□□ 0.47
CPSF4-201ENST00000292476 GOLGA6AQ9NYA3 693 aa17.99■□□□□ 0.47
CPSF4-201ENST00000292476 CPSF3Q9UKF6 684 aaKnown RBP17.99■□□□□ 0.47
CPSF4-201ENST00000292476 EVPLQ92817 2033 aa17.98■□□□□ 0.47
CPSF4-201ENST00000292476 TULP2O00295 520 aa17.98■□□□□ 0.47
CPSF4-201ENST00000292476 DDX3XO00571 662 aaKnown RBP eCLIP17.98■□□□□ 0.471e-17■■□□□ 12.9
CPSF4-201ENST00000292476 ABLIM1O14639 778 aa17.98■□□□□ 0.47
CPSF4-201ENST00000292476 CABYRO75952 493 aa17.98■□□□□ 0.47
CPSF4-201ENST00000292476 PGK1P00558 417 aa17.98■□□□□ 0.47
CPSF4-201ENST00000292476 CLTAP09496 248 aa17.98■□□□□ 0.47
CPSF4-201ENST00000292476 HARSP12081 509 aaKnown RBP17.98■□□□□ 0.47
CPSF4-201ENST00000292476 RNF180Q86T96 592 aa17.98■□□□□ 0.47
CPSF4-201ENST00000292476 CD302Q8IX05 232 aa17.98■□□□□ 0.47
CPSF4-201ENST00000292476 RASGEF1CQ8N431 466 aa17.98■□□□□ 0.47
CPSF4-201ENST00000292476 SYT11Q9BT88 431 aa17.98■□□□□ 0.47
CPSF4-201ENST00000292476 TSPYL1Q9H0U9 437 aa17.98■□□□□ 0.47
CPSF4-201ENST00000292476 ADAMTS10Q9H324 1103 aa17.98■□□□□ 0.47
CPSF4-201ENST00000292476 UBE2TQ9NPD8 197 aaPredicted RBP17.98■□□□□ 0.47
CPSF4-201ENST00000292476 STXBP5LQ9Y2K9 1186 aa17.98■□□□□ 0.47
CPSF4-201ENST00000292476 BHMG1C9JSJ3 638 aaPredicted RBP17.97■□□□□ 0.47
CPSF4-201ENST00000292476 PGRMC1O00264 195 aaKnown RBP17.97■□□□□ 0.47
CPSF4-201ENST00000292476 FAM189A1O60320 539 aa17.97■□□□□ 0.47
CPSF4-201ENST00000292476 EVI5O60447 810 aa17.97■□□□□ 0.47
CPSF4-201ENST00000292476 ADAMTS4O75173 837 aa17.97■□□□□ 0.47
CPSF4-201ENST00000292476 GLI1P08151 1106 aa17.97■□□□□ 0.47
CPSF4-201ENST00000292476 TMEM253P0C7T8 217 aa17.97■□□□□ 0.47
CPSF4-201ENST00000292476 NOP2P46087 812 aaKnown RBP17.97■□□□□ 0.47
CPSF4-201ENST00000292476 CUL1Q13616 776 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms