RNA–Protein interactions for RNA: ENST00000280551.10

SEC24D-201, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC24D, Length 4,030 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-201ENST00000280551 TRAPPC12Q8WVT3 735 aa10.88□□□□□ -0.67
SEC24D-201ENST00000280551 NMRK2Q9NPI5 230 aa10.88□□□□□ -0.67
SEC24D-201ENST00000280551 UMODL1Q5DID0 1318 aa10.88□□□□□ -0.67
SEC24D-201ENST00000280551 REV3LO60673 3130 aa10.88□□□□□ -0.67
SEC24D-201ENST00000280551 NCK2O43639 380 aa10.88□□□□□ -0.67
SEC24D-201ENST00000280551 SORBS3O60504 671 aa10.88□□□□□ -0.67
SEC24D-201ENST00000280551 CST3P01034 146 aaPredicted RBP10.88□□□□□ -0.67
SEC24D-201ENST00000280551 RPL34P49207 117 aaKnown RBP10.88□□□□□ -0.67
SEC24D-201ENST00000280551 GJA9P57773 515 aa10.88□□□□□ -0.67
SEC24D-201ENST00000280551 VSNL1P62760 191 aa10.88□□□□□ -0.67
SEC24D-201ENST00000280551 NOP14P78316 857 aaKnown RBP10.88□□□□□ -0.67
SEC24D-201ENST00000280551 IRX5P78411 483 aaPredicted RBP10.88□□□□□ -0.67
SEC24D-201ENST00000280551 NCOA4Q13772 614 aa10.88□□□□□ -0.67
SEC24D-201ENST00000280551 DCAF4L1Q3SXM0 396 aa10.88□□□□□ -0.67
SEC24D-201ENST00000280551 REM2Q8IYK8 340 aaPredicted RBP10.88□□□□□ -0.67
SEC24D-201ENST00000280551 MCOLN2Q8IZK6 566 aa10.88□□□□□ -0.67
SEC24D-201ENST00000280551 METTL13Q8N6R0 699 aa10.88□□□□□ -0.67
SEC24D-201ENST00000280551 BICD1Q96G01 975 aa10.88□□□□□ -0.67
SEC24D-201ENST00000280551 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.88□□□□□ -0.67
SEC24D-201ENST00000280551 OSGEPQ9NPF4 335 aa10.88□□□□□ -0.67
SEC24D-201ENST00000280551 CLEC11AQ9Y240 323 aa10.88□□□□□ -0.67
SEC24D-201ENST00000280551 MROH7Q68CQ1 1323 aa10.88□□□□□ -0.67
SEC24D-201ENST00000280551 B4GALT5O43286 388 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 KPNA6O60684 536 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 FTLP02792 175 aaPredicted RBP10.87□□□□□ -0.67
SEC24D-201ENST00000280551 CST5P28325 142 aaPredicted RBP10.87□□□□□ -0.67
SEC24D-201ENST00000280551 PDE6CP51160 858 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 DUOXA2Q1HG44 320 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 CCNI2Q6ZMN8 369 aaPredicted RBP10.87□□□□□ -0.67
SEC24D-201ENST00000280551 NME8Q8N427 588 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 NIPA2Q8N8Q9 360 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 CCDC127Q96BQ5 260 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 ZSWIM1Q9BR11 485 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.87□□□□□ -0.672e-7■■□□□ 12.6
SEC24D-201ENST00000280551 ARGLU1Q9NWB6 273 aaPredicted RBP10.87□□□□□ -0.67
SEC24D-201ENST00000280551 TDRD15B5MCY1 1934 aaKnown RBP10.87□□□□□ -0.67
SEC24D-201ENST00000280551 CCDC188H7C350 402 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 PAEPP09466 180 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 ARF4P18085 180 aaPredicted RBP10.87□□□□□ -0.67
SEC24D-201ENST00000280551 ECHS1P30084 290 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 CYP2C19P33261 490 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 RGS2P41220 211 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 GABRB2P47870 512 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 CLCN3P51790 818 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 ARID5AQ03989 594 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 SIX1Q15475 284 aaPredicted RBP10.87□□□□□ -0.67
SEC24D-201ENST00000280551 ARHGAP44Q17R89 818 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 CCSAPQ6IQ19 270 aaPredicted RBP10.87□□□□□ -0.67
SEC24D-201ENST00000280551 RHPN2Q8IUC4 686 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 WHAMMQ8TF30 809 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 LRRC4CQ9HCJ2 640 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 CNTN3Q9P232 1028 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 PUF60Q9UHX1 559 aaKnown RBP10.87□□□□□ -0.67
SEC24D-201ENST00000280551 ZEB2O60315 1214 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 PTPN7P35236 360 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 TRPV1Q8NER1 839 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 OR6J1Q8NGC5 347 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 CTNNBL1Q8WYA6 563 aaPredicted RBP10.87□□□□□ -0.67
SEC24D-201ENST00000280551 CCDC102AQ96A19 550 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 NIF3L1Q9GZT8 377 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 WNT8AQ9H1J5 351 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 CYP3A43Q9HB55 503 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 PCDHA3Q9Y5H8 950 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 FAM163BP0C2L3 166 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 MYBL2P10244 700 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 HUNKP57058 714 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 SREBF2Q12772 1141 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 SLC10A6Q3KNW5 377 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 GJC2Q5T442 439 aaPredicted RBP10.87□□□□□ -0.67
SEC24D-201ENST00000280551 PPM1KQ8N3J5 372 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 FNBP1Q96RU3 617 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 TRPC6Q9Y210 931 aa10.87□□□□□ -0.67
SEC24D-201ENST00000280551 CA12O43570 354 aa10.86□□□□□ -0.67
SEC24D-201ENST00000280551 ZNF286BP0CG31 522 aa10.86□□□□□ -0.67
SEC24D-201ENST00000280551 SMIM10L2AP0DMW4 78 aa10.86□□□□□ -0.67
SEC24D-201ENST00000280551 SMIM10L2BP0DMW5 78 aa10.86□□□□□ -0.67
SEC24D-201ENST00000280551 MARK3P27448 753 aa10.86□□□□□ -0.67
SEC24D-201ENST00000280551 PIK3CAP42336 1068 aa10.86□□□□□ -0.67
SEC24D-201ENST00000280551 RPS6KA1Q15418 735 aa10.86□□□□□ -0.67
SEC24D-201ENST00000280551 ZNF513Q8N8E2 541 aaPredicted RBP10.86□□□□□ -0.67
SEC24D-201ENST00000280551 TRAIPQ9BWF2 469 aa10.86□□□□□ -0.67
SEC24D-201ENST00000280551 RBM12Q9NTZ6 932 aaKnown RBP10.86□□□□□ -0.67
SEC24D-201ENST00000280551 ITGA11Q9UKX5 1188 aa10.86□□□□□ -0.67
SEC24D-201ENST00000280551 MMP8P22894 467 aa10.86□□□□□ -0.67
SEC24D-201ENST00000280551 EIF4BP23588 611 aaKnown RBP10.86□□□□□ -0.67
SEC24D-201ENST00000280551 CPT1AP50416 773 aa10.86□□□□□ -0.67
SEC24D-201ENST00000280551 CBLBQ13191 982 aa10.86□□□□□ -0.67
SEC24D-201ENST00000280551 DPP9Q86TI2 863 aa10.86□□□□□ -0.67
SEC24D-201ENST00000280551 C1orf127Q8N9H9 656 aa10.86□□□□□ -0.67
SEC24D-201ENST00000280551 SLITRK6Q9H5Y7 841 aa10.86□□□□□ -0.67
SEC24D-201ENST00000280551 EYSQ5T1H1 3165 aa10.86□□□□□ -0.67
SEC24D-201ENST00000280551 PLXNA3P51805 1871 aa10.86□□□□□ -0.67
SEC24D-201ENST00000280551 GJB1P08034 283 aa10.86□□□□□ -0.67
SEC24D-201ENST00000280551 DLATP10515 647 aaKnown RBP10.86□□□□□ -0.67
SEC24D-201ENST00000280551 PURAQ00577 322 aaKnown RBP10.86□□□□□ -0.67
SEC24D-201ENST00000280551 PPFIA1Q13136 1202 aa10.86□□□□□ -0.67
SEC24D-201ENST00000280551 LONRF2Q1L5Z9 754 aa10.86□□□□□ -0.67
SEC24D-201ENST00000280551 WDR44Q5JSH3 913 aa10.86□□□□□ -0.67
SEC24D-201ENST00000280551 C1orf131Q8NDD1 294 aaKnown RBP10.86□□□□□ -0.67
SEC24D-201ENST00000280551 A0A087WZ62 844 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms