RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 CNN3Q15417 329 aaKnown RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 BBS9Q3SYG4 887 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 MAEAQ7L5Y9 396 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 IQUBQ8NA54 791 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 MARCH10Q8NA82 808 aaPredicted RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 CHST14Q8NCH0 376 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 DNAJB8Q8NHS0 232 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 GPBAR1Q8TDU6 330 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 BORCS6Q96GS4 357 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 C16orf92Q96LL3 132 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 BAG1Q99933 345 aaPredicted RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 PYM1Q9BRP8 204 aaKnown RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 GPATCH1Q9BRR8 931 aaKnown RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 MCMBPQ9BTE3 642 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 PUS3Q9BZE2 481 aaKnown RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 H2AFY2Q9P0M6 372 aaPredicted RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 DBNLQ9UJU6 430 aaKnown RBP3.16□□□□□ -1.9
HERC4-201ENST00000277817 COG5Q9UP83 839 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 GPR34Q9UPC5 381 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 SPO11Q9Y5K1 396 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 ATAD5Q96QE3 1844 aa3.16□□□□□ -1.9
HERC4-201ENST00000277817 ELP1O95163 1332 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 ATG2AQ2TAZ0 1938 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 A0A087WWV3 80 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 C17orf113A0A1B0GUU1 675 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 CTAGE15A4D2H0 777 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 RRN3P2A6NIE6 340 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 C1QTNF9BB2RNN3 333 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 RNF223E7ERA6 249 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 F8W8V4 182 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 CTAGE8P0CG41 777 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 CALM1P0DP23 149 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 CALM2P0DP24 149 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 CALM3P0DP25 149 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 ABCB4P21439 1286 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 VAMP2P63027 116 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 GSTO1P78417 241 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 TNP2Q05952 138 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 PRPF4BQ13523 1007 aaKnown RBP3.15□□□□□ -1.9
HERC4-201ENST00000277817 SLC15A2Q16348 729 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 RILPL1Q5EBL4 403 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 ZNF569Q5MCW4 686 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 RNF220Q5VTB9 566 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 GPAT2Q6NUI2 795 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 ESRP1Q6NXG1 681 aaKnown RBP3.15□□□□□ -1.9
HERC4-201ENST00000277817 GLRX5Q86SX6 157 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 CTAGE6Q86UF2 777 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 ZNF589Q86UQ0 364 aaPredicted RBP3.15□□□□□ -1.9
HERC4-201ENST00000277817 VPS36Q86VN1 386 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 NOSTRINQ8IVI9 506 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 CTAGE4Q8IX94 777 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 DCAF4Q8WV16 495 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 CUL5Q93034 780 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 WNK4Q96J92 1243 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 TBCBQ99426 244 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 CCDC94Q9BW85 323 aaPredicted RBP3.15□□□□□ -1.9
HERC4-201ENST00000277817 VPS16Q9H269 839 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 TFCP2L1Q9NZI6 479 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 HERC5Q9UII4 1024 aaKnown RBP3.15□□□□□ -1.9
HERC4-201ENST00000277817 GDF2Q9UK05 429 aaPredicted RBP3.15□□□□□ -1.9
HERC4-201ENST00000277817 IGSF1Q8N6C5 1336 aa3.15□□□□□ -1.9
HERC4-201ENST00000277817 FIGNL2A6NMB9 653 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 SLC7A4O43246 635 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 KIF20AO95235 890 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 LARGE1O95461 756 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 ALDH2P05091 517 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 CYP21A2P08686 494 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 RHOXF2BP0C7M4 288 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 U2AF2P26368 475 aaKnown RBP eCLIP3.15□□□□□ -1.911e-6■■■□□ 16
HERC4-201ENST00000277817 CALML3P27482 149 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 RDXP35241 583 aaKnown RBP3.15□□□□□ -1.91
HERC4-201ENST00000277817 GNAQP50148 359 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 ARFIP2P53365 341 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 RAB15P59190 212 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 GPR85P60893 370 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 TGFB2P61812 414 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 RAC1P63000 192 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 SPAG1Q07617 926 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 SCRN1Q12765 414 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 SHROOM1Q2M3G4 852 aaPredicted RBP3.15□□□□□ -1.91
HERC4-201ENST00000277817 ZBTB37Q5TC79 503 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 CYP4F22Q6NT55 531 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 CTR9Q6PD62 1173 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 PIK3AP1Q6ZUJ8 805 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 FAM114A1Q8IWE2 563 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 ZNF610Q8N9Z0 462 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 ANKRD52Q8NB46 1076 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 CAPZA3Q96KX2 299 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 SLC6A18Q96N87 628 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 RHOXF2Q9BQY4 288 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 SYT17Q9BSW7 474 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 DSCC1Q9BVC3 393 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 RASSF4Q9H2L5 321 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 CXorf56Q9H5V9 222 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 SRP68Q9UHB9 627 aaKnown RBP3.15□□□□□ -1.91
HERC4-201ENST00000277817 MAFFQ9ULX9 164 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 CTAGE9A4FU28 777 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 PLOD2O00469 737 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 TADA3O75528 432 aa3.15□□□□□ -1.91
HERC4-201ENST00000277817 SASH1O94885 1247 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms