RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 MNAT1P51948 309 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 ITGA8P53708 1063 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 CAV1Q03135 178 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 MPP2Q14168 576 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 LONRF1Q17RB8 773 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 CCDC142Q17RM4 750 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 LLGL2Q6P1M3 1020 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 CRELD2Q6UXH1 353 aaPredicted RBP13.25□□□□□ -0.29
BEST3-201ENST00000266661 TAOK1Q7L7X3 1001 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 OTUD6AQ7L8S5 288 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 ANKS1BQ7Z6G8 1248 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 ATL2Q8NHH9 583 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 IPO4Q8TEX9 1081 aaKnown RBP13.25□□□□□ -0.29
BEST3-201ENST00000266661 ZKSCAN4Q969J2 545 aaPredicted RBP13.25□□□□□ -0.29
BEST3-201ENST00000266661 TRIM11Q96F44 468 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 CEP170P1Q96L14 293 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 GABBR1Q9UBS5 961 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 NFASCO94856 1347 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 PARP14Q460N5 1801 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 O00370 1275 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 VWA5AO00534 786 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 DGAT1O75907 488 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 NR3C2P08235 984 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 CFHP08603 1231 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 FDX1P10109 184 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 KRT5P13647 590 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 DSG3P32926 999 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 TAS2R40P59535 323 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 SNX1Q13596 522 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 BAATQ14032 418 aaPredicted RBP13.25□□□□□ -0.29
BEST3-201ENST00000266661 LLGL1Q15334 1064 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 CCNG2Q16589 344 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 GALNTL6Q49A17 601 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 CCDC38Q502W7 563 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 ARHGEF16Q5VV41 709 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 PLEKHA7Q6IQ23 1121 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 APOBEC3FQ8IUX4 373 aaKnown RBP13.25□□□□□ -0.29
BEST3-201ENST00000266661 MCPH1Q8NEM0 835 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 CPA5Q8WXQ8 436 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 ARHGEF2Q92974 986 aaKnown RBP13.25□□□□□ -0.29
BEST3-201ENST00000266661 WNK4Q96J92 1243 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 ELAC2Q9BQ52 826 aaKnown RBP13.25□□□□□ -0.29
BEST3-201ENST00000266661 FAM213AQ9BRX8 229 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 HAPLN2Q9GZV7 340 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 APOBEC3GQ9HC16 384 aaKnown RBP13.25□□□□□ -0.29
BEST3-201ENST00000266661 NINJ2Q9NZG7 142 aa13.25□□□□□ -0.29
BEST3-201ENST00000266661 SSC5DA1L4H1 1573 aa13.24□□□□□ -0.29
BEST3-201ENST00000266661 PTPRJQ12913 1337 aa13.24□□□□□ -0.29
BEST3-201ENST00000266661 TESPA1A2RU30 521 aaPredicted RBP13.24□□□□□ -0.29
BEST3-201ENST00000266661 PSTPIP1O43586 416 aa13.24□□□□□ -0.29
BEST3-201ENST00000266661 CELF2O95319 508 aaKnown RBP13.24□□□□□ -0.29
BEST3-201ENST00000266661 PIGRP01833 764 aa13.24□□□□□ -0.29
BEST3-201ENST00000266661 HLA-DRAP01903 254 aa13.24□□□□□ -0.29
BEST3-201ENST00000266661 CETPP11597 493 aa13.24□□□□□ -0.29
BEST3-201ENST00000266661 KLRC2P26717 231 aa13.24□□□□□ -0.29
BEST3-201ENST00000266661 CCND2P30279 289 aa13.24□□□□□ -0.29
BEST3-201ENST00000266661 BPIFB4P59827 614 aa13.24□□□□□ -0.29
BEST3-201ENST00000266661 NOMO3P69849 1222 aa13.24□□□□□ -0.29
BEST3-201ENST00000266661 WLSQ5T9L3 541 aa13.24□□□□□ -0.29
BEST3-201ENST00000266661 TDRD10Q5VZ19 366 aaKnown RBP13.24□□□□□ -0.29
BEST3-201ENST00000266661 ABHD15Q6UXT9 468 aa13.24□□□□□ -0.29
BEST3-201ENST00000266661 TRMT1LQ7Z2T5 733 aaKnown RBP13.24□□□□□ -0.29
BEST3-201ENST00000266661 NLRX1Q86UT6 975 aa13.24□□□□□ -0.29
BEST3-201ENST00000266661 CCDC25Q86WR0 208 aa13.24□□□□□ -0.29
BEST3-201ENST00000266661 PHF13Q86YI8 300 aaPredicted RBP13.24□□□□□ -0.29
BEST3-201ENST00000266661 PARP9Q8IXQ6 854 aa13.24□□□□□ -0.29
BEST3-201ENST00000266661 KATNAL2Q8IYT4 538 aa13.24□□□□□ -0.29
BEST3-201ENST00000266661 GRK7Q8WTQ7 553 aa13.24□□□□□ -0.29
BEST3-201ENST00000266661 VCPIP1Q96JH7 1222 aa13.24□□□□□ -0.29
BEST3-201ENST00000266661 TRAIPQ9BWF2 469 aa13.24□□□□□ -0.29
BEST3-201ENST00000266661 KIAA1586Q9HCI6 787 aa13.24□□□□□ -0.29
BEST3-201ENST00000266661 CD248Q9HCU0 757 aa13.24□□□□□ -0.29
BEST3-201ENST00000266661 HOMER3Q9NSC5 361 aa13.24□□□□□ -0.29
BEST3-201ENST00000266661 TPX2Q9ULW0 747 aaKnown RBP13.24□□□□□ -0.29
BEST3-201ENST00000266661 RLFQ13129 1914 aa13.24□□□□□ -0.29
BEST3-201ENST00000266661 HNRNPDLO14979 420 aaKnown RBP13.23□□□□□ -0.29
BEST3-201ENST00000266661 ZBED4O75132 1171 aa13.23□□□□□ -0.29
BEST3-201ENST00000266661 ACSL3O95573 720 aa13.23□□□□□ -0.29
BEST3-201ENST00000266661 RALAP11233 206 aa13.23□□□□□ -0.29
BEST3-201ENST00000266661 MKRN4PQ13434 485 aaPredicted RBP13.23□□□□□ -0.29
BEST3-201ENST00000266661 MAMLD1Q13495 774 aa13.23□□□□□ -0.29
BEST3-201ENST00000266661 KYNUQ16719 465 aa13.23□□□□□ -0.29
BEST3-201ENST00000266661 CCDC60Q8IWA6 550 aaPredicted RBP13.23□□□□□ -0.29
BEST3-201ENST00000266661 ABRAQ8N0Z2 381 aa13.23□□□□□ -0.29
BEST3-201ENST00000266661 CYP4X1Q8N118 509 aa13.23□□□□□ -0.29
BEST3-201ENST00000266661 CKAP2Q8WWK9 683 aa13.23□□□□□ -0.29
BEST3-201ENST00000266661 ATP6V0A1Q93050 837 aa13.23□□□□□ -0.29
BEST3-201ENST00000266661 PWWP2AQ96N64 755 aa13.23□□□□□ -0.29
BEST3-201ENST00000266661 RPAP3Q9H6T3 665 aaPredicted RBP13.23□□□□□ -0.29
BEST3-201ENST00000266661 CYP26B1Q9NR63 512 aa13.23□□□□□ -0.29
BEST3-201ENST00000266661 C1orf112Q9NSG2 853 aa13.23□□□□□ -0.29
BEST3-201ENST00000266661 ASIC3Q9UHC3 531 aa13.23□□□□□ -0.29
BEST3-201ENST00000266661 ADAMTS5Q9UNA0 930 aa13.23□□□□□ -0.29
BEST3-201ENST00000266661 OTOFQ9HC10 1997 aa13.23□□□□□ -0.29
BEST3-201ENST00000266661 TMEM120BA0PK00 339 aa13.23□□□□□ -0.29
BEST3-201ENST00000266661 DKC1O60832 514 aaKnown RBP eCLIP13.23□□□□□ -0.29
BEST3-201ENST00000266661 ELF3P78545 371 aaPredicted RBP13.23□□□□□ -0.29
BEST3-201ENST00000266661 PREPLQ4J6C6 727 aaPredicted RBP13.23□□□□□ -0.29
BEST3-201ENST00000266661 TMEM63BQ5T3F8 832 aa13.23□□□□□ -0.29
BEST3-201ENST00000266661 SWSAP1Q6NVH7 229 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms