RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 AP5M1Q9H0R1 490 aa5.71□□□□□ -1.5
XRN1-201ENST00000264951 TEX46H3BTG2 121 aa5.71□□□□□ -1.5
XRN1-201ENST00000264951 APOL1O14791 398 aa5.71□□□□□ -1.5
XRN1-201ENST00000264951 CYTH3O43739 400 aa5.71□□□□□ -1.5
XRN1-201ENST00000264951 ZNF862O60290 1169 aa5.71□□□□□ -1.5
XRN1-201ENST00000264951 PHKA2P46019 1235 aa5.71□□□□□ -1.5
XRN1-201ENST00000264951 DYNLT1P63172 113 aa5.71□□□□□ -1.5
XRN1-201ENST00000264951 TBL3Q12788 808 aaKnown RBP5.71□□□□□ -1.5
XRN1-201ENST00000264951 FAM83EQ2M2I3 478 aa5.71□□□□□ -1.5
XRN1-201ENST00000264951 SHROOM1Q2M3G4 852 aaPredicted RBP5.71□□□□□ -1.5
XRN1-201ENST00000264951 ILKAPQ9H0C8 392 aaPredicted RBP5.71□□□□□ -1.5
XRN1-201ENST00000264951 STK39Q9UEW8 545 aa5.71□□□□□ -1.5
XRN1-201ENST00000264951 TTC7AQ9ULT0 858 aaPredicted RBP5.71□□□□□ -1.5
XRN1-201ENST00000264951 SNX12Q9UMY4 172 aa5.71□□□□□ -1.5
XRN1-201ENST00000264951 ADGRG1Q9Y653 693 aa5.71□□□□□ -1.5
XRN1-201ENST00000264951 HUS1O60921 280 aa5.71□□□□□ -1.5
XRN1-201ENST00000264951 SKAP2O75563 359 aaPredicted RBP5.71□□□□□ -1.5
XRN1-201ENST00000264951 SOAT2O75908 522 aa5.71□□□□□ -1.5
XRN1-201ENST00000264951 POLBP06746 335 aa5.71□□□□□ -1.5
XRN1-201ENST00000264951 COX10Q12887 443 aa5.71□□□□□ -1.5
XRN1-201ENST00000264951 PIGHQ14442 188 aaPredicted RBP5.71□□□□□ -1.5
XRN1-201ENST00000264951 HIST2H2ACQ16777 129 aaPredicted RBP5.71□□□□□ -1.5
XRN1-201ENST00000264951 CERKLQ49MI3 558 aaPredicted RBP5.71□□□□□ -1.5
XRN1-201ENST00000264951 RBM20Q5T481 1227 aaKnown RBP5.71□□□□□ -1.5
XRN1-201ENST00000264951 MFSD4BQ5TF39 518 aa5.71□□□□□ -1.5
XRN1-201ENST00000264951 SLFN13Q68D06 897 aa5.71□□□□□ -1.5
XRN1-201ENST00000264951 HIST2H2AA3Q6FI13 130 aa5.71□□□□□ -1.5
XRN1-201ENST00000264951 PLEKHA7Q6IQ23 1121 aa5.71□□□□□ -1.5
XRN1-201ENST00000264951 KDM7AQ6ZMT4 941 aa5.71□□□□□ -1.5
XRN1-201ENST00000264951 MAEAQ7L5Y9 396 aa5.71□□□□□ -1.5
XRN1-201ENST00000264951 CHMP1BQ7LBR1 199 aa5.71□□□□□ -1.5
XRN1-201ENST00000264951 SFR1Q86XK3 245 aa5.71□□□□□ -1.5
XRN1-201ENST00000264951 ZNF677Q86XU0 584 aa5.71□□□□□ -1.5
XRN1-201ENST00000264951 USP44Q9H0E7 712 aa5.71□□□□□ -1.5
XRN1-201ENST00000264951 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.71□□□□□ -1.5
XRN1-201ENST00000264951 P4HA2O15460 535 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 PEX1O43933 1283 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 PGM3O95394 542 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 POLR2EP19388 210 aaKnown RBP5.7□□□□□ -1.5
XRN1-201ENST00000264951 ZNF200P98182 395 aaPredicted RBP5.7□□□□□ -1.5
XRN1-201ENST00000264951 GTF2H3Q13889 308 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 IRGCQ6NXR0 463 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 PADI6Q6TGC4 694 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 ARHGEF26Q96DR7 871 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 KIFC1Q9BW19 673 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 CCDC59Q9P031 241 aaKnown RBP5.7□□□□□ -1.5
XRN1-201ENST00000264951 KDM5BQ9UGL1 1544 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 PLA2G4BP0C869 781 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 MLNP12872 115 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 IL12AP29459 219 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 KDSRQ06136 332 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 POU5F1BQ06416 359 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 NFIAQ12857 509 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 TRIP13Q15645 432 aaPredicted RBP5.7□□□□□ -1.5
XRN1-201ENST00000264951 FAM83BQ5T0W9 1011 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 FAM173BQ6P4H8 233 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 TNIP3Q96KP6 325 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 KATNAL1Q9BW62 490 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 HERC5Q9UII4 1024 aaKnown RBP5.7□□□□□ -1.5
XRN1-201ENST00000264951 LRFN2Q9ULH4 789 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 TIMM44O43615 452 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 VPS4BO75351 444 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 ZMYND10O75800 440 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 FAM200BP0CF97 657 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 CCDC166P0CW27 439 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 CCNA2P20248 432 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 ACADLP28330 430 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 S100GP29377 79 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 MAD2L1Q13257 205 aaPredicted RBP5.7□□□□□ -1.5
XRN1-201ENST00000264951 TTC39BQ5VTQ0 682 aaPredicted RBP5.7□□□□□ -1.5
XRN1-201ENST00000264951 MZT2AQ6P582 158 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 CYB5D1Q6P9G0 228 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 FNIP1Q8TF40 1166 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 CEP170P1Q96L14 293 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 RHBDL2Q9NX52 303 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 ETAA1Q9NY74 926 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 EIF3LQ9Y262 564 aaKnown RBP5.7□□□□□ -1.5
XRN1-201ENST00000264951 EFR3BQ9Y2G0 817 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 COMMD3-BMI1R4GMX3 469 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 COL17A1Q9UMD9 1497 aaPredicted RBP5.7□□□□□ -1.5
XRN1-201ENST00000264951 B2RBV5 119 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 AHCYL1O43865 530 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 ARHGDIBP52566 201 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 TUBA3EQ6PEY2 450 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 KCNV2Q8TDN2 545 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 PIGOQ8TEQ8 1089 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 GLMNQ92990 594 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 RBM15Q96T37 977 aaKnown RBP eCLIP5.7□□□□□ -1.5
XRN1-201ENST00000264951 ECSITQ9BQ95 431 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 GGA2Q9UJY4 613 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 G3BP2Q9UN86 482 aaKnown RBP5.7□□□□□ -1.5
XRN1-201ENST00000264951 SAGE2PA6NJ88 616 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 CHP2O43745 196 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 TOM1O60784 492 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 MAPKAPK2P49137 400 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 LGALS3BPQ08380 585 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 ADCY1Q08828 1119 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 NDUFAF6Q330K2 333 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 MFSD14BQ5SR56 506 aa5.7□□□□□ -1.5
XRN1-201ENST00000264951 NFRKBQ6P4R8 1299 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms