RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 RFC2P35250 354 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 KRT9P35527 623 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 AP3M2P53677 418 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 EPHB4P54760 987 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 RAPGEF1Q13905 1077 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 IKBKEQ14164 716 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 NAB2Q15742 525 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 CACNA2D4Q7Z3S7 1137 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 PPM1KQ8N3J5 372 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 TMEM199Q8N511 208 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 BAP1Q92560 729 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 DPF3Q92784 378 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 KREMEN1Q96MU8 473 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 RPS6KC1Q96S38 1066 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 ARID3AQ99856 593 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 PAAF1Q9BRP4 392 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 NUP58Q9BVL2 599 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 NAA15Q9BXJ9 866 aaKnown RBP10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 XYLT2Q9H1B5 865 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 C1orf112Q9NSG2 853 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 APEX2Q9UBZ4 518 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 PRKAG2Q9UGJ0 569 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 POLIQ9UNA4 740 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 LUC7L2Q9Y383 392 aaKnown RBP10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 PCDHB7Q9Y5E2 793 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 CEP290O15078 2479 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 LRRC53A6NM62 1247 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 B4GALT3O60512 393 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 EOMESO95936 686 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 CALCAP01258 141 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 THP07101 528 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 SKIP12755 728 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 NOP14P78316 857 aaKnown RBP10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 DEFB103AP81534 67 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 WDR44Q5JSH3 913 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 C9orf57Q5W0N0 161 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 FAM117BQ6P1L5 589 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 PDXDC1Q6P996 788 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 SCARA5Q6ZMJ2 495 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 OTOP2Q7RTS6 562 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 NT5DC4Q86YG4 428 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 ZNF280BQ86YH2 543 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 CRIPAKQ8N1N5 446 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 BEST2Q8NFU1 509 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 NT5C1BQ96P26 610 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 KCNF1Q9H3M0 494 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 TMEM161AQ9NX61 479 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 CEP72Q9P209 647 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 HCSTQ9UBK5 93 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 NXF1Q9UBU9 619 aaKnown RBP10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 LRFN2Q9ULH4 789 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 UBQLN1Q9UMX0 589 aaKnown RBP10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 DERAQ9Y315 318 aa10.48□□□□□ -0.73
SNRNP40-201ENST00000263694 FNDC1Q4ZHG4 1894 aaPredicted RBP10.47□□□□□ -0.73
SNRNP40-201ENST00000263694 LTBP2Q14767 1821 aa10.47□□□□□ -0.73
SNRNP40-201ENST00000263694 A0A1W2PQJ5 194 aa10.47□□□□□ -0.73
SNRNP40-201ENST00000263694 CASTOR2A6NHX0 329 aa10.47□□□□□ -0.73
SNRNP40-201ENST00000263694 GOLGA6L6A8MZA4 724 aa10.47□□□□□ -0.73
SNRNP40-201ENST00000263694 DDHD2O94830 711 aa10.47□□□□□ -0.73
SNRNP40-201ENST00000263694 ASS1P00966 412 aaKnown RBP10.47□□□□□ -0.73
SNRNP40-201ENST00000263694 SKILP12757 684 aa10.47□□□□□ -0.73
SNRNP40-201ENST00000263694 RAP1GAPP47736 663 aa10.47□□□□□ -0.73
SNRNP40-201ENST00000263694 RBP5P82980 135 aa10.47□□□□□ -0.73
SNRNP40-201ENST00000263694 ZBED6P86452 979 aa10.47□□□□□ -0.73
SNRNP40-201ENST00000263694 ARID5AQ03989 594 aa10.47□□□□□ -0.73
SNRNP40-201ENST00000263694 TRIM14Q14142 442 aa10.47□□□□□ -0.73
SNRNP40-201ENST00000263694 DRAP1Q14919 205 aaPredicted RBP10.47□□□□□ -0.73
SNRNP40-201ENST00000263694 SGSM1Q2NKQ1 1148 aa10.47□□□□□ -0.73
SNRNP40-201ENST00000263694 ZNF699Q32M78 642 aa10.47□□□□□ -0.73
SNRNP40-201ENST00000263694 WDR72Q3MJ13 1102 aa10.47□□□□□ -0.73
SNRNP40-201ENST00000263694 FIGNQ5HY92 759 aa10.47□□□□□ -0.73
SNRNP40-201ENST00000263694 ZNF365Q70YC5 407 aa10.47□□□□□ -0.73
SNRNP40-201ENST00000263694 LRRC8AQ8IWT6 810 aa10.47□□□□□ -0.73
SNRNP40-201ENST00000263694 TNS4Q8IZW8 715 aa10.47□□□□□ -0.73
SNRNP40-201ENST00000263694 HPDLQ96IR7 371 aa10.47□□□□□ -0.73
SNRNP40-201ENST00000263694 CASD1Q96PB1 797 aa10.47□□□□□ -0.73
SNRNP40-201ENST00000263694 GPR88Q9GZN0 384 aa10.47□□□□□ -0.73
SNRNP40-201ENST00000263694 IL23AQ9NPF7 189 aa10.47□□□□□ -0.73
SNRNP40-201ENST00000263694 ABHD10Q9NUJ1 306 aa10.47□□□□□ -0.73
SNRNP40-201ENST00000263694 ITGA11Q9UKX5 1188 aa10.47□□□□□ -0.73
SNRNP40-201ENST00000263694 PTPRSQ13332 1948 aa10.47□□□□□ -0.73
SNRNP40-201ENST00000263694 ANO9A1A5B4 782 aa10.46□□□□□ -0.74
SNRNP40-201ENST00000263694 F8W810 466 aa10.46□□□□□ -0.74
SNRNP40-201ENST00000263694 FOXN3O00409 490 aaPredicted RBP10.46□□□□□ -0.74
SNRNP40-201ENST00000263694 PIRO00625 290 aa10.46□□□□□ -0.74
SNRNP40-201ENST00000263694 SPTLC1O15269 473 aa10.46□□□□□ -0.74
SNRNP40-201ENST00000263694 TPM1P09493 284 aa10.46□□□□□ -0.74
SNRNP40-201ENST00000263694 WEE2P0C1S8 567 aa10.46□□□□□ -0.74
SNRNP40-201ENST00000263694 CLCNKBP51801 687 aa10.46□□□□□ -0.74
SNRNP40-201ENST00000263694 CDH8P55286 799 aa10.46□□□□□ -0.74
SNRNP40-201ENST00000263694 JAM2P57087 298 aa10.46□□□□□ -0.74
SNRNP40-201ENST00000263694 FPGSQ05932 587 aa10.46□□□□□ -0.74
SNRNP40-201ENST00000263694 PAN2Q504Q3 1202 aaKnown RBP10.46□□□□□ -0.74
SNRNP40-201ENST00000263694 NOMO2Q5JPE7 1267 aa10.46□□□□□ -0.74
SNRNP40-201ENST00000263694 WDR59Q6PJI9 974 aa10.46□□□□□ -0.74
SNRNP40-201ENST00000263694 GLB1LQ6UWU2 654 aa10.46□□□□□ -0.74
SNRNP40-201ENST00000263694 RPUSD2Q8IZ73 545 aaKnown RBP10.46□□□□□ -0.74
SNRNP40-201ENST00000263694 OR8K1Q8NGG5 319 aa10.46□□□□□ -0.74
SNRNP40-201ENST00000263694 SPAG5Q96R06 1193 aa10.46□□□□□ -0.74
SNRNP40-201ENST00000263694 DNAJC7Q99615 494 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms