RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 SPATA24Q86W54 205 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 MSL3Q8N5Y2 521 aaKnown RBP10.68□□□□□ -0.7
PALB2-201ENST00000261584 SMC1BQ8NDV3 1235 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 SNRNP27Q8WVK2 155 aaKnown RBP10.68□□□□□ -0.7
PALB2-201ENST00000261584 HES6Q96HZ4 224 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 KCNH7Q9NS40 1196 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 LRRC4BQ9NT99 713 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 K7ERI5 159 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 NFIBO00712 420 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 DCTN3O75935 186 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 KRT36O76013 467 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 PECAM1P16284 738 aaPredicted RBP10.68□□□□□ -0.7
PALB2-201ENST00000261584 BGNP21810 368 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 QARSP47897 775 aaKnown RBP10.68□□□□□ -0.7
PALB2-201ENST00000261584 RGS7P49802 495 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 AP3B2Q13367 1082 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 TMEM179Q6ZVK1 233 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 COL23A1Q86Y22 540 aaPredicted RBP10.68□□□□□ -0.7
PALB2-201ENST00000261584 CCNYQ8ND76 341 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 BAZ2AQ9UIF9 1905 aaKnown RBP10.68□□□□□ -0.7
PALB2-201ENST00000261584 CACNA1FO60840 1977 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 H0YIN7 160 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 MEIS2O14770 477 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 CST8O60676 142 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 SERPINB3P29508 390 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 GEN1Q17RS7 908 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 ZCWPW2Q504Y3 356 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 RNF220Q5VTB9 566 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 OR6B2Q6IFH4 312 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 ZBTB46Q86UZ6 589 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 NME8Q8N427 588 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 MREGQ8N565 214 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 C1orf131Q8NDD1 294 aaKnown RBP10.68□□□□□ -0.7
PALB2-201ENST00000261584 PCMTD2Q9NV79 361 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 STOML1Q9UBI4 398 aa10.68□□□□□ -0.7
PALB2-201ENST00000261584 TOPAZ1Q8N9V7 1692 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 RNF8O76064 485 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 KPNB1Q14974 876 aaKnown RBP10.67□□□□□ -0.7
PALB2-201ENST00000261584 SV2AQ7L0J3 742 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 RHOT1Q8IXI2 618 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 MAIP1Q8WWC4 291 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 ZBTB45Q96K62 511 aaPredicted RBP10.67□□□□□ -0.7
PALB2-201ENST00000261584 CLPTM1LQ96KA5 538 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 FGD4Q96M96 766 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 TSSK1BQ9BXA7 367 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 TBC1D10AQ9BXI6 508 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 CEP41Q9BYV8 373 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 GLIS2Q9BZE0 524 aaPredicted RBP10.67□□□□□ -0.7
PALB2-201ENST00000261584 TMEM39BQ9GZU3 492 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 MIS12Q9H081 205 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 GPATCH2LQ9NWQ4 482 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 AFDNP55196 1824 aaKnown RBP10.67□□□□□ -0.7
PALB2-201ENST00000261584 COL1A1P02452 1464 aaPredicted RBP10.67□□□□□ -0.7
PALB2-201ENST00000261584 hCG_1984214I3L0E3 225 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 BBOX1O75936 387 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 ITIH2P19823 946 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 MSX2P35548 267 aaPredicted RBP10.67□□□□□ -0.7
PALB2-201ENST00000261584 ABCG1P45844 678 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 DEUP1Q05D60 604 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 FAM228AQ86W67 206 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 CERS5Q8N5B7 392 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 ZNF713Q8N859 430 aaPredicted RBP10.67□□□□□ -0.7
PALB2-201ENST00000261584 CCHCR1Q8TD31 782 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 USP6NLQ92738 828 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 TARS2Q9BW92 718 aaKnown RBP10.67□□□□□ -0.7
PALB2-201ENST00000261584 RHBDL2Q9NX52 303 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 ZFATQ9P243 1243 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 SLC9A2Q9UBY0 812 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 ZHX2Q9Y6X8 837 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 RPTORQ8N122 1335 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 MYH15Q9Y2K3 1946 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 ESYT2A0FGR8 921 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 DDX3YO15523 660 aaKnown RBP10.67□□□□□ -0.7
PALB2-201ENST00000261584 ZMPSTE24O75844 475 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 TRMT10CQ7L0Y3 403 aaKnown RBP10.67□□□□□ -0.7
PALB2-201ENST00000261584 KDELC2Q7Z4H8 507 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 ECHDC2Q86YB7 292 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 CD302Q8IX05 232 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 RUBCNQ92622 972 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 FAM149B1Q96BN6 582 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 SENP7Q9BQF6 1050 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 VPS11Q9H270 941 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 NKX1-2Q9UD57 310 aaPredicted RBP10.67□□□□□ -0.7
PALB2-201ENST00000261584 TRAF3IP3Q9Y228 551 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 AK5Q9Y6K8 562 aa10.67□□□□□ -0.7
PALB2-201ENST00000261584 CAMTA1Q9Y6Y1 1673 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 LTN1O94822 1766 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 SESN2P58004 480 aaPredicted RBP10.66□□□□□ -0.7
PALB2-201ENST00000261584 PPP4CP60510 307 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 AKAP12Q02952 1782 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 MIPOL1Q8TD10 442 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 WDR18Q9BV38 432 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 NALCNQ8IZF0 1738 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 ATRNO75882 1429 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 F8VP50 259 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 NOP56O00567 594 aaKnown RBP10.66□□□□□ -0.7
PALB2-201ENST00000261584 PDE5AO76074 875 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 USP1O94782 785 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 TJP3O95049 919 aa10.66□□□□□ -0.7
PALB2-201ENST00000261584 ADRB2P07550 413 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms